GH720919

EST Overview
NameGH720919
Unique NameGH720919
TypeEST
OrganismPisum sativum (pea)
Sequence length370
Libraries
Library NameType
LIBEST_024273 BACNIcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of GH720919 vs. TrEMBL
Match: B9RTZ9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1457950 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.760e-13
Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 3
Query:   90 GIDWEDLIIETLILHQVKEEEIEKGHYNTLLGLHVFNSG 206
            GIDWED +IETL+LHQVKEEEIEKGHYNTLL LHVFNSG
Sbjct:  492 GIDWEDFVIETLLLHQVKEEEIEKGHYNTLLDLHVFNSG 530          
BLAST of GH720919 vs. TrEMBL
Match: D7TJK6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021206001 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.141e-12
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 3
Query:   87 DGIDWEDLIIETLILHQVKEEEIEKGHYNTLLGLHVFNSG 206
            +GIDWED +IETL+LH VKE+EIEKGHYNTLL LHVFNSG
Sbjct:  489 NGIDWEDFVIETLLLHHVKEDEIEKGHYNTLLDLHVFNSG 528          
BLAST of GH720919 vs. TrEMBL
Match: A5ARF8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003231 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.141e-12
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 3
Query:   87 DGIDWEDLIIETLILHQVKEEEIEKGHYNTLLGLHVFNSG 206
            +GIDWED +IETL+LH VKE+EIEKGHYNTLL LHVFNSG
Sbjct:  462 NGIDWEDFVIETLLLHHVKEDEIEKGHYNTLLDLHVFNSG 501          
BLAST of GH720919 vs. TrEMBL
Match: B9H3C7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_648156 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.541e-12
Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = 3
Query:   81 VVDGIDWEDLIIETLILHQVKEEEIEKGHYNTLLGLHVFNSGVV 212
            +V  IDWED +IETL+LHQVKEEEIEKG+YNTL+ LHVFNSG +
Sbjct:  486 LVKDIDWEDFVIETLLLHQVKEEEIEKGYYNTLMDLHVFNSGTM 529          
BLAST of GH720919 vs. TrEMBL
Match: B9T586_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0069140 PE=4 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.393e-12
Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = 3
Query:   90 GIDWEDLIIETLILHQVKEEEIEKGHYNTLLGLHVFNSG 206
            G+ W+D +IETL+LHQVKEEEIEKGHYNTLL LHVFNSG
Sbjct:  142 GVVWKDFVIETLLLHQVKEEEIEKGHYNTLLDLHVFNSG 180          
BLAST of GH720919 vs. TrEMBL
Match: O81787_ARATH (Putative uncharacterized protein AT4g35540 OS=Arabidopsis thaliana GN=AT4g35540 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.151e-11
Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = 3
Query:   93 IDWEDLIIETLILHQVKEEEIEKGHYNTLLGLHVFNSGVV 212
            IDWEDL+I+TL+LH V EEEIEKGHY TLL LHVFNSG V
Sbjct:  488 IDWEDLVIQTLVLHNVNEEEIEKGHYKTLLDLHVFNSGEV 527          
BLAST of GH720919 vs. TrEMBL
Match: D7UCC1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_46.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00026940001 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.151e-11
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 3
Query:   93 IDWEDLIIETLILHQVKEEEIEKGHYNTLLGLHVFNSG 206
            IDWED  IETL+LH VKE+EIEKGHYNTLL LHVFNSG
Sbjct:  496 IDWEDFAIETLLLHHVKEDEIEKGHYNTLLDLHVFNSG 533          
BLAST of GH720919 vs. TrEMBL
Match: A5AQX9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019153 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.151e-11
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 3
Query:   93 IDWEDLIIETLILHQVKEEEIEKGHYNTLLGLHVFNSG 206
            IDWED  IETL+LH VKE+EIEKGHYNTLL LHVFNSG
Sbjct:  496 IDWEDFAIETLLLHHVKEDEIEKGHYNTLLDLHVFNSG 533          
BLAST of GH720919 vs. TrEMBL
Match: D7MCZ5_ARALY (Zinc ion binding protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_491092 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.106e-10
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 3
Query:   93 IDWEDLIIETLILHQVKEEEIEKGHYNTLLGLHVFNSGVV 212
            IDWEDL+I+TL+LH V EEEIEKGHY TL+ LHVF+SG +
Sbjct:  491 IDWEDLVIQTLVLHNVNEEEIEKGHYKTLVELHVFDSGEI 530          
BLAST of GH720919 vs. TrEMBL
Match: Q6YZD8_ORYSJ (Putative uncharacterized protein P0702E04.20-1 OS=Oryza sativa subsp. japonica GN=P0702E04.20-1 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.214e-7
Identity = 27/41 (65.85%), Postives = 29/41 (70.73%), Query Frame = 3
Query:   75 GVVVDGIDWEDLIIETLILHQVKEEEIEKGHYNTLLGLHVF 197
            G   DGIDWED IIE L+LH   EEEIE+G Y  LL LHVF
Sbjct:  524 GAPSDGIDWEDCIIELLLLHGANEEEIEQGQYRRLLDLHVF 564          
BLAST of GH720919 vs. TAIR peptide
Match: AT4G35540.1 (| Symbols: | zinc ion binding;transcription regulators | chr4:16873939-16875522 FORWARD LENGTH=527)

HSP 1 Score: 72.0182 bits (175), Expect = 9.274e-14
Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = 3
Query:   93 IDWEDLIIETLILHQVKEEEIEKGHYNTLLGLHVFNSGVV 212
            IDWEDL+I+TL+LH V EEEIEKGHY TLL LHVFNSG V
Sbjct:  488 IDWEDLVIQTLVLHNVNEEEIEKGHYKTLLDLHVFNSGEV 527          
The following BLAST results are available for this feature:
BLAST of GH720919 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RTZ9_RICCO1.760e-1389.74Putative uncharacterized protein OS=Ricinus commun... [more]
D7TJK6_VITVI1.141e-1282.50Whole genome shotgun sequence of line PN40024, sca... [more]
A5ARF8_VITVI1.141e-1282.50Putative uncharacterized protein OS=Vitis vinifera... [more]
B9H3C7_POPTR2.541e-1275.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9T586_RICCO7.393e-1282.05Putative uncharacterized protein OS=Ricinus commun... [more]
O81787_ARATH2.151e-1180.00Putative uncharacterized protein AT4g35540 OS=Arab... [more]
D7UCC1_VITVI2.151e-1184.21Whole genome shotgun sequence of line PN40024, sca... [more]
A5AQX9_VITVI2.151e-1184.21Putative uncharacterized protein OS=Vitis vinifera... [more]
D7MCZ5_ARALY3.106e-1072.50Zinc ion binding protein OS=Arabidopsis lyrata sub... [more]
Q6YZD8_ORYSJ3.214e-765.85Putative uncharacterized protein P0702E04.20-1 OS=... [more]
back to top
BLAST of GH720919 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G35540.19.274e-1480.00| Symbols: | zinc ion binding;transcription regul... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 19..24
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GH720919 ID=GH720919; Name=GH720919; organism=Pisum sativum; type=EST; length=370bp
TTCGAGCGGCCGCCCGGGCAGGTACTCTTGGCATTTTAGATAGCACTTGC
ACTGAGAGAAGGAAGAAGAGAAGAGGAGTGGTAGTTGATGGTATTGATTG
GGAAGACTTGATTATTGAGACACTTATTCTTCATCAAGTAAAGGAAGAAG
AAATTGAGAAGGGGCATTACAATACTTTACTAGGCCTACACGTGTTTAAC
TCCGGTGTTGTATAAGAGAGGTTTAAGGTGTAAAGACATTACATTAGAGG
TTTCAGATTTACTGGCATTTTAATGATCTATTGGATAGTGATATTTTCTG
ATTTACCACAATCTTATGATAGAGCAGATATTTTTATGCTGCAAATTTTG
TACCTCGGCCGCGACCACGC
back to top