AJ308176
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of AJ308176 vs. TrEMBL
Match: B7FLK8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 2.227e-48 Identity = 96/111 (86.49%), Postives = 98/111 (88.29%), Query Frame = 1 Query: 1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAIGASQAIYDGGFQNVAAAQQMM 333 THAEAALAIQMGN QSYLCGK+IKCSWGSKPTPPGTASN GLSATDIL YERQ+AMSKMGGVHAALMHPQAQHPLKQAAIGASQAIYDGGFQNVAAAQQMM Sbjct: 294 THAEAALAIQMGNAQSYLCGKIIKCSWGSKPTPPGTASNPLPPPAAAPLPGLSATDILAYERQLAMSKMGGVHAALMHPQAQHPLKQAAIGASQAIYDGGFQNVAAAQQMM 404
BLAST of AJ308176 vs. TrEMBL
Match: B9ST80_RICCO (Nucleolysin tia-1, putative OS=Ricinus communis GN=RCOM_0684960 PE=4 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 3.807e-40 Identity = 88/116 (75.86%), Postives = 93/116 (80.17%), Query Frame = 1 Query: 1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAI-----GASQAIYDGGFQNVAAAQQMM 333 THAEAALAIQMGNTQS L GK IKCSWGSKPTPPGT+SN GLSATD+L YERQ+AM KMGGVH ALMHPQ QHPLKQAA+ GASQAIYDGGFQNVAAAQQ+M Sbjct: 305 THAEAALAIQMGNTQSILYGKQIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLTYERQLAMGKMGGVH-ALMHPQGQHPLKQAAMGMGAAGASQAIYDGGFQNVAAAQQLM 419
BLAST of AJ308176 vs. TrEMBL
Match: D7TZP5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016720001 PE=4 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.889e-39 Identity = 87/116 (75.00%), Postives = 92/116 (79.31%), Query Frame = 1 Query: 1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAI-----GASQAIYDGGFQNVAAAQQMM 333 THAEAALAIQMGNTQS LCGK IKCSWGSKPTPPGT+SN GLSATD+L YERQ+AMSKMG ALMHPQ QHPLKQAA+ GASQAIYDGGFQNVAAAQQ+M Sbjct: 292 THAEAALAIQMGNTQSILCGKPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKMG---HALMHPQGQHPLKQAAMGMGAAGASQAIYDGGFQNVAAAQQLM 404
BLAST of AJ308176 vs. TrEMBL
Match: A5AXF7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027348 PE=4 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.889e-39 Identity = 87/116 (75.00%), Postives = 92/116 (79.31%), Query Frame = 1 Query: 1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAI-----GASQAIYDGGFQNVAAAQQMM 333 THAEAALAIQMGNTQS LCGK IKCSWGSKPTPPGT+SN GLSATD+L YERQ+AMSKMG ALMHPQ QHPLKQAA+ GASQAIYDGGFQNVAAAQQ+M Sbjct: 305 THAEAALAIQMGNTQSILCGKPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKMG---HALMHPQGQHPLKQAAMGMGAAGASQAIYDGGFQNVAAAQQLM 417
BLAST of AJ308176 vs. TrEMBL
Match: B9N7F5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_673211 PE=4 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.728e-38 Identity = 86/116 (74.14%), Postives = 93/116 (80.17%), Query Frame = 1 Query: 1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQA-----AIGASQAIYDGGFQNVAAAQQMM 333 THAEAALAIQMGNTQS L GK +KCSWGSKPTPPGT+SN GL+ATDIL YERQ+A+SKMGG+H ALMHPQ QHPLKQA A GASQAIYDGGFQNVAAAQQ+M Sbjct: 310 THAEAALAIQMGNTQS-LFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPLPGLTATDILAYERQLAISKMGGIH-ALMHPQGQHPLKQATMGMGAAGASQAIYDGGFQNVAAAQQLM 423
BLAST of AJ308176 vs. TrEMBL
Match: B9GVQ6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_645804 PE=4 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.768e-37 Identity = 83/115 (72.17%), Postives = 90/115 (78.26%), Query Frame = 1 Query: 1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAI----GASQAIYDGGFQNVAAAQQMM 333 THAEAA+AIQMGN QS LCGK IKCSWGSKPTPPGT+SN G+SATDIL YERQ+A+SKMGGVH A M P Q PLKQAA+ GASQAIYDGGFQNVAAAQQ+M Sbjct: 305 THAEAAVAIQMGNAQSLLCGKQIKCSWGSKPTPPGTSSNPLPPPAAAPLPGISATDILAYERQLALSKMGGVH-AFMPPHGQLPLKQAAMGMGAGASQAIYDGGFQNVAAAQQLM 418
BLAST of AJ308176 vs. TrEMBL
Match: Q8LAP3_ARATH (Oligouridylate binding protein, putative OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.401e-34 Identity = 77/115 (66.96%), Postives = 87/115 (75.65%), Query Frame = 1 Query: 1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQA----AIGASQAIYDGGFQNVAAAQQMM 333 TH EAALAIQMGNTQ YL + IKCSWG+KPTPPGTASN GLSA D+L YERQ+A+SKM V+ ALMHPQ QHPL+QA A GA+ A+YDGGFQNVAAAQQ+M Sbjct: 311 THPEAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVN-ALMHPQGQHPLRQAHGINAAGATAAMYDGGFQNVAAAQQLM 424
BLAST of AJ308176 vs. TrEMBL
Match: D7L2C5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478823 PE=4 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.325e-34 Identity = 76/116 (65.52%), Postives = 86/116 (74.14%), Query Frame = 1 Query: 1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQA-----AIGASQAIYDGGFQNVAAAQQMM 333 TH EAALAIQMGNTQ YL + IKCSWG+KPTPPGTASN GLSA D+L YERQ+A+SKM V+ ALMHPQ QHPL+Q A GA+ A+YDGGFQNVAAAQQ+M Sbjct: 313 THPEAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLAYERQLALSKMASVN-ALMHPQGQHPLRQGAHGINAAGATAAMYDGGFQNVAAAQQLM 427
BLAST of AJ308176 vs. TrEMBL
Match: Q9LJH8_ARATH (AT3g14100/MAG2_5 OS=Arabidopsis thaliana GN=At3g14100 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.186e-33 Identity = 76/115 (66.09%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQA----AIGASQAIYDGGFQNVAAAQQMM 333 TH EAALAIQMGNTQ YL + IKCSWG+KPTPPGTASN GLSA D+L YERQ+A+SKM V+ ALMH Q QHPL+QA A GA+ A+YDGGFQNVAAAQQ+M Sbjct: 311 THPEAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVN-ALMHQQGQHPLRQAHGINAAGATAAMYDGGFQNVAAAQQLM 424
BLAST of AJ308176 vs. TrEMBL
Match: D7KFE8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_889143 PE=4 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.004e-32 Identity = 73/114 (64.04%), Postives = 84/114 (73.68%), Query Frame = 1 Query: 1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAIGA---SQAIYDGGFQNVAAAQQMM 333 TH EAALAI MGNT SYL G+ +KCSWGSKPTPPGTASN G SA+D+L YERQ+AMSKM G++ + HPQ QH LKQAA+GA +QAIYDGGFQN AQQ+M Sbjct: 306 THVEAALAISMGNTHSYLSGRQMKCSWGSKPTPPGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPLMHHPQGQHALKQAAMGATGSNQAIYDGGFQN---AQQLM 416
BLAST of AJ308176 vs. TAIR peptide
Match: AT3G14100.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:4673027-4675950 FORWARD LENGTH=427) HSP 1 Score: 145.976 bits (367), Expect = 4.573e-36 Identity = 76/115 (66.09%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQA----AIGASQAIYDGGFQNVAAAQQMM 333 TH EAALAIQMGNTQ YL + IKCSWG+KPTPPGTASN GLSA D+L YERQ+A+SKM V+ ALMH Q QHPL+QA A GA+ A+YDGGFQNVAAAQQ+M Sbjct: 311 THPEAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVN-ALMHQQGQHPLRQAHGINAAGATAAMYDGGFQNVAAAQQLM 424
BLAST of AJ308176 vs. TAIR peptide
Match: AT1G17370.2 (| Symbols: UBP1B | oligouridylate binding protein 1B | chr1:5951842-5954825 REVERSE LENGTH=416) HSP 1 Score: 139.043 bits (349), Expect = 5.590e-34 Identity = 71/114 (62.28%), Postives = 83/114 (72.81%), Query Frame = 1 Query: 1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAIGA---SQAIYDGGFQNVAAAQQMM 333 TH EAALAIQMGNT SYL G+ +KCSWGSKPTP GTASN G SA+D+L YERQ+AMSKM G++ + HPQ QH KQAA+GA +QAIYDGG+QN AQQ+M Sbjct: 303 THVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHAFKQAAMGATGSNQAIYDGGYQN---AQQLM 413
BLAST of AJ308176 vs. TAIR peptide
Match: AT1G17370.1 (| Symbols: UBP1B | oligouridylate binding protein 1B | chr1:5951842-5954825 REVERSE LENGTH=419) HSP 1 Score: 139.043 bits (349), Expect = 5.590e-34 Identity = 71/114 (62.28%), Postives = 83/114 (72.81%), Query Frame = 1 Query: 1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAIGA---SQAIYDGGFQNVAAAQQMM 333 TH EAALAIQMGNT SYL G+ +KCSWGSKPTP GTASN G SA+D+L YERQ+AMSKM G++ + HPQ QH KQAA+GA +QAIYDGG+QN AQQ+M Sbjct: 306 THVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHAFKQAAMGATGSNQAIYDGGYQN---AQQLM 416
BLAST of AJ308176 vs. TAIR peptide
Match: AT1G54080.1 (| Symbols: UBP1A | oligouridylate-binding protein 1A | chr1:20183923-20186824 REVERSE LENGTH=426) HSP 1 Score: 118.627 bits (296), Expect = 7.819e-28 Identity = 62/116 (53.45%), Postives = 76/116 (65.52%), Query Frame = 1 Query: 1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAI-----GASQAIYDGGFQNVAAAQQMM 333 TH EAALAIQMGN Q +L + I+CSWG+KPTP GTASN LSA D+L YERQ+A++K MHPQAQH L+QA + G + A+YDGG+QNVAAA Q + Sbjct: 315 THDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQLALAK--------MHPQAQHSLRQAGLGVNVAGGTAAMYDGGYQNVAAAHQQL 422
BLAST of AJ308176 vs. TAIR peptide
Match: AT1G54080.2 (| Symbols: UBP1A | oligouridylate-binding protein 1A | chr1:20183923-20186824 REVERSE LENGTH=430) HSP 1 Score: 118.627 bits (296), Expect = 7.819e-28 Identity = 62/116 (53.45%), Postives = 76/116 (65.52%), Query Frame = 1 Query: 1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAI-----GASQAIYDGGFQNVAAAQQMM 333 TH EAALAIQMGN Q +L + I+CSWG+KPTP GTASN LSA D+L YERQ+A++K MHPQAQH L+QA + G + A+YDGG+QNVAAA Q + Sbjct: 319 THDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQLALAK--------MHPQAQHSLRQAGLGVNVAGGTAAMYDGGYQNVAAAHQQL 426 The following BLAST results are available for this feature:
BLAST of AJ308176 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of AJ308176 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 5
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >AJ308176 ID=AJ308176; Name=AJ308176; organism=Pisum sativum; type=EST; length=334bpback to top |