AJ308176

EST Overview
NameAJ308176
Unique NameAJ308176
TypeEST
OrganismPisum sativum (pea)
Sequence length334
Libraries
Library NameType
LIBEST_009888 SSHcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of AJ308176 vs. TrEMBL
Match: B7FLK8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.227e-48
Identity = 96/111 (86.49%), Postives = 98/111 (88.29%), Query Frame = 1
Query:    1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAIGASQAIYDGGFQNVAAAQQMM 333
            THAEAALAIQMGN QSYLCGK+IKCSWGSKPTPPGTASN           GLSATDIL YERQ+AMSKMGGVHAALMHPQAQHPLKQAAIGASQAIYDGGFQNVAAAQQMM
Sbjct:  294 THAEAALAIQMGNAQSYLCGKIIKCSWGSKPTPPGTASNPLPPPAAAPLPGLSATDILAYERQLAMSKMGGVHAALMHPQAQHPLKQAAIGASQAIYDGGFQNVAAAQQMM 404          
BLAST of AJ308176 vs. TrEMBL
Match: B9ST80_RICCO (Nucleolysin tia-1, putative OS=Ricinus communis GN=RCOM_0684960 PE=4 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.807e-40
Identity = 88/116 (75.86%), Postives = 93/116 (80.17%), Query Frame = 1
Query:    1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAI-----GASQAIYDGGFQNVAAAQQMM 333
            THAEAALAIQMGNTQS L GK IKCSWGSKPTPPGT+SN           GLSATD+L YERQ+AM KMGGVH ALMHPQ QHPLKQAA+     GASQAIYDGGFQNVAAAQQ+M
Sbjct:  305 THAEAALAIQMGNTQSILYGKQIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLTYERQLAMGKMGGVH-ALMHPQGQHPLKQAAMGMGAAGASQAIYDGGFQNVAAAQQLM 419          
BLAST of AJ308176 vs. TrEMBL
Match: D7TZP5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016720001 PE=4 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.889e-39
Identity = 87/116 (75.00%), Postives = 92/116 (79.31%), Query Frame = 1
Query:    1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAI-----GASQAIYDGGFQNVAAAQQMM 333
            THAEAALAIQMGNTQS LCGK IKCSWGSKPTPPGT+SN           GLSATD+L YERQ+AMSKMG    ALMHPQ QHPLKQAA+     GASQAIYDGGFQNVAAAQQ+M
Sbjct:  292 THAEAALAIQMGNTQSILCGKPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKMG---HALMHPQGQHPLKQAAMGMGAAGASQAIYDGGFQNVAAAQQLM 404          
BLAST of AJ308176 vs. TrEMBL
Match: A5AXF7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027348 PE=4 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.889e-39
Identity = 87/116 (75.00%), Postives = 92/116 (79.31%), Query Frame = 1
Query:    1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAI-----GASQAIYDGGFQNVAAAQQMM 333
            THAEAALAIQMGNTQS LCGK IKCSWGSKPTPPGT+SN           GLSATD+L YERQ+AMSKMG    ALMHPQ QHPLKQAA+     GASQAIYDGGFQNVAAAQQ+M
Sbjct:  305 THAEAALAIQMGNTQSILCGKPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKMG---HALMHPQGQHPLKQAAMGMGAAGASQAIYDGGFQNVAAAQQLM 417          
BLAST of AJ308176 vs. TrEMBL
Match: B9N7F5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_673211 PE=4 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.728e-38
Identity = 86/116 (74.14%), Postives = 93/116 (80.17%), Query Frame = 1
Query:    1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQA-----AIGASQAIYDGGFQNVAAAQQMM 333
            THAEAALAIQMGNTQS L GK +KCSWGSKPTPPGT+SN           GL+ATDIL YERQ+A+SKMGG+H ALMHPQ QHPLKQA     A GASQAIYDGGFQNVAAAQQ+M
Sbjct:  310 THAEAALAIQMGNTQS-LFGKQMKCSWGSKPTPPGTSSNPLPPPAAAPLPGLTATDILAYERQLAISKMGGIH-ALMHPQGQHPLKQATMGMGAAGASQAIYDGGFQNVAAAQQLM 423          
BLAST of AJ308176 vs. TrEMBL
Match: B9GVQ6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_645804 PE=4 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.768e-37
Identity = 83/115 (72.17%), Postives = 90/115 (78.26%), Query Frame = 1
Query:    1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAI----GASQAIYDGGFQNVAAAQQMM 333
            THAEAA+AIQMGN QS LCGK IKCSWGSKPTPPGT+SN           G+SATDIL YERQ+A+SKMGGVH A M P  Q PLKQAA+    GASQAIYDGGFQNVAAAQQ+M
Sbjct:  305 THAEAAVAIQMGNAQSLLCGKQIKCSWGSKPTPPGTSSNPLPPPAAAPLPGISATDILAYERQLALSKMGGVH-AFMPPHGQLPLKQAAMGMGAGASQAIYDGGFQNVAAAQQLM 418          
BLAST of AJ308176 vs. TrEMBL
Match: Q8LAP3_ARATH (Oligouridylate binding protein, putative OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.401e-34
Identity = 77/115 (66.96%), Postives = 87/115 (75.65%), Query Frame = 1
Query:    1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQA----AIGASQAIYDGGFQNVAAAQQMM 333
            TH EAALAIQMGNTQ YL  + IKCSWG+KPTPPGTASN           GLSA D+L YERQ+A+SKM  V+ ALMHPQ QHPL+QA    A GA+ A+YDGGFQNVAAAQQ+M
Sbjct:  311 THPEAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVN-ALMHPQGQHPLRQAHGINAAGATAAMYDGGFQNVAAAQQLM 424          
BLAST of AJ308176 vs. TrEMBL
Match: D7L2C5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478823 PE=4 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.325e-34
Identity = 76/116 (65.52%), Postives = 86/116 (74.14%), Query Frame = 1
Query:    1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQA-----AIGASQAIYDGGFQNVAAAQQMM 333
            TH EAALAIQMGNTQ YL  + IKCSWG+KPTPPGTASN           GLSA D+L YERQ+A+SKM  V+ ALMHPQ QHPL+Q      A GA+ A+YDGGFQNVAAAQQ+M
Sbjct:  313 THPEAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLAYERQLALSKMASVN-ALMHPQGQHPLRQGAHGINAAGATAAMYDGGFQNVAAAQQLM 427          
BLAST of AJ308176 vs. TrEMBL
Match: Q9LJH8_ARATH (AT3g14100/MAG2_5 OS=Arabidopsis thaliana GN=At3g14100 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.186e-33
Identity = 76/115 (66.09%), Postives = 86/115 (74.78%), Query Frame = 1
Query:    1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQA----AIGASQAIYDGGFQNVAAAQQMM 333
            TH EAALAIQMGNTQ YL  + IKCSWG+KPTPPGTASN           GLSA D+L YERQ+A+SKM  V+ ALMH Q QHPL+QA    A GA+ A+YDGGFQNVAAAQQ+M
Sbjct:  311 THPEAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVN-ALMHQQGQHPLRQAHGINAAGATAAMYDGGFQNVAAAQQLM 424          
BLAST of AJ308176 vs. TrEMBL
Match: D7KFE8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_889143 PE=4 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.004e-32
Identity = 73/114 (64.04%), Postives = 84/114 (73.68%), Query Frame = 1
Query:    1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAIGA---SQAIYDGGFQNVAAAQQMM 333
            TH EAALAI MGNT SYL G+ +KCSWGSKPTPPGTASN           G SA+D+L YERQ+AMSKM G++  + HPQ QH LKQAA+GA   +QAIYDGGFQN   AQQ+M
Sbjct:  306 THVEAALAISMGNTHSYLSGRQMKCSWGSKPTPPGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPLMHHPQGQHALKQAAMGATGSNQAIYDGGFQN---AQQLM 416          
BLAST of AJ308176 vs. TAIR peptide
Match: AT3G14100.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:4673027-4675950 FORWARD LENGTH=427)

HSP 1 Score: 145.976 bits (367), Expect = 4.573e-36
Identity = 76/115 (66.09%), Postives = 86/115 (74.78%), Query Frame = 1
Query:    1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQA----AIGASQAIYDGGFQNVAAAQQMM 333
            TH EAALAIQMGNTQ YL  + IKCSWG+KPTPPGTASN           GLSA D+L YERQ+A+SKM  V+ ALMH Q QHPL+QA    A GA+ A+YDGGFQNVAAAQQ+M
Sbjct:  311 THPEAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVN-ALMHQQGQHPLRQAHGINAAGATAAMYDGGFQNVAAAQQLM 424          
BLAST of AJ308176 vs. TAIR peptide
Match: AT1G17370.2 (| Symbols: UBP1B | oligouridylate binding protein 1B | chr1:5951842-5954825 REVERSE LENGTH=416)

HSP 1 Score: 139.043 bits (349), Expect = 5.590e-34
Identity = 71/114 (62.28%), Postives = 83/114 (72.81%), Query Frame = 1
Query:    1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAIGA---SQAIYDGGFQNVAAAQQMM 333
            TH EAALAIQMGNT SYL G+ +KCSWGSKPTP GTASN           G SA+D+L YERQ+AMSKM G++  + HPQ QH  KQAA+GA   +QAIYDGG+QN   AQQ+M
Sbjct:  303 THVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHAFKQAAMGATGSNQAIYDGGYQN---AQQLM 413          
BLAST of AJ308176 vs. TAIR peptide
Match: AT1G17370.1 (| Symbols: UBP1B | oligouridylate binding protein 1B | chr1:5951842-5954825 REVERSE LENGTH=419)

HSP 1 Score: 139.043 bits (349), Expect = 5.590e-34
Identity = 71/114 (62.28%), Postives = 83/114 (72.81%), Query Frame = 1
Query:    1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAIGA---SQAIYDGGFQNVAAAQQMM 333
            TH EAALAIQMGNT SYL G+ +KCSWGSKPTP GTASN           G SA+D+L YERQ+AMSKM G++  + HPQ QH  KQAA+GA   +QAIYDGG+QN   AQQ+M
Sbjct:  306 THVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHAFKQAAMGATGSNQAIYDGGYQN---AQQLM 416          
BLAST of AJ308176 vs. TAIR peptide
Match: AT1G54080.1 (| Symbols: UBP1A | oligouridylate-binding protein 1A | chr1:20183923-20186824 REVERSE LENGTH=426)

HSP 1 Score: 118.627 bits (296), Expect = 7.819e-28
Identity = 62/116 (53.45%), Postives = 76/116 (65.52%), Query Frame = 1
Query:    1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAI-----GASQAIYDGGFQNVAAAQQMM 333
            TH EAALAIQMGN Q +L  + I+CSWG+KPTP GTASN            LSA D+L YERQ+A++K        MHPQAQH L+QA +     G + A+YDGG+QNVAAA Q +
Sbjct:  315 THDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQLALAK--------MHPQAQHSLRQAGLGVNVAGGTAAMYDGGYQNVAAAHQQL 422          
BLAST of AJ308176 vs. TAIR peptide
Match: AT1G54080.2 (| Symbols: UBP1A | oligouridylate-binding protein 1A | chr1:20183923-20186824 REVERSE LENGTH=430)

HSP 1 Score: 118.627 bits (296), Expect = 7.819e-28
Identity = 62/116 (53.45%), Postives = 76/116 (65.52%), Query Frame = 1
Query:    1 THAEAALAIQMGNTQSYLCGKLIKCSWGSKPTPPGTASNXXXXXXXXXXXGLSATDILGYERQIAMSKMGGVHAALMHPQAQHPLKQAAI-----GASQAIYDGGFQNVAAAQQMM 333
            TH EAALAIQMGN Q +L  + I+CSWG+KPTP GTASN            LSA D+L YERQ+A++K        MHPQAQH L+QA +     G + A+YDGG+QNVAAA Q +
Sbjct:  319 THDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQLALAK--------MHPQAQHSLRQAGLGVNVAGGTAAMYDGGYQNVAAAHQQL 426          
The following BLAST results are available for this feature:
BLAST of AJ308176 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FLK8_MEDTR2.227e-4886.49Putative uncharacterized protein OS=Medicago trunc... [more]
B9ST80_RICCO3.807e-4075.86Nucleolysin tia-1, putative OS=Ricinus communis GN... [more]
D7TZP5_VITVI1.889e-3975.00Whole genome shotgun sequence of line PN40024, sca... [more]
A5AXF7_VITVI1.889e-3975.00Putative uncharacterized protein OS=Vitis vinifera... [more]
B9N7F5_POPTR2.728e-3874.14Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GVQ6_POPTR1.768e-3772.17Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q8LAP3_ARATH1.401e-3466.96Oligouridylate binding protein, putative OS=Arabid... [more]
D7L2C5_ARALY5.325e-3465.52Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9LJH8_ARATH1.186e-3366.09AT3g14100/MAG2_5 OS=Arabidopsis thaliana GN=At3g14... [more]
D7KFE8_ARALY1.004e-3264.04Putative uncharacterized protein OS=Arabidopsis ly... [more]
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BLAST of AJ308176 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G14100.14.573e-3666.09| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
AT1G17370.25.590e-3462.28| Symbols: UBP1B | oligouridylate binding protein ... [more]
AT1G17370.15.590e-3462.28| Symbols: UBP1B | oligouridylate binding protein ... [more]
AT1G54080.17.819e-2853.45| Symbols: UBP1A | oligouridylate-binding protein ... [more]
AT1G54080.27.819e-2853.45| Symbols: UBP1A | oligouridylate-binding protein ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 40..50
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>AJ308176 ID=AJ308176; Name=AJ308176; organism=Pisum sativum; type=EST; length=334bp
ACTCATGCTGAAGCAGCTCTGGCAATTCAGATGGGAAACACCCAGTCTTA
TCTCTGCGGAAAACTAATTAAGTGCTCCTGGGGGAGCAAGCCCACTCCAC
CTGGGACTGCTTCAAATCCTCTTCCCCCACCTGCTGCCGCGCCTTTGCCA
GGTCTGTCCGCAACTGATATTTTGGGCTACGAGAGGCAGATAGCAATGAG
CAAGATGGGCGGTGTTCATGCTGCATTGATGCATCCCCAAGCGCAACATC
CTCTTAAGCAGGCTGCAATCGGAGCAAGCCAGGCGATATATGACGGCGGG
TTCCAAAATGTTGCTGCTGCACAGCAAATGATGT
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