AM161907

EST Overview
NameAM161907
Unique NameAM161907
TypeEST
OrganismPisum sativum (pea)
Sequence length248
Libraries
Library NameType
LIBEST_019360 Pisum sativum leaf vegetativecdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of AM161907 vs. TrEMBL
Match: C6TMG5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.658e-33
Identity = 71/79 (89.87%), Postives = 73/79 (92.41%), Query Frame = 3
Query:    9 SKRFANHATFSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIASAGG 245
            S  FA HA FSISASAAEKKKVLI+NTNSGGHA+IGFYFAKELLGAGHSVTILTVGDE SDKMKKPPFNRFSEI SAGG
Sbjct:   59 STHFATHAAFSISASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSDKMKKPPFNRFSEIVSAGG 137          
BLAST of AM161907 vs. TrEMBL
Match: C6TM93_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.922e-33
Identity = 70/80 (87.50%), Postives = 74/80 (92.50%), Query Frame = 3
Query:    6 TSKRFANHATFSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIASAGG 245
            +S  FA HA FSISASAAEKKKVLI+NTNSGGHA+IGFYFAKELLGAGHSVTILTVG+E SDKMKKPPFNRFSEI SAGG
Sbjct:   57 SSTHFATHAAFSISASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKMKKPPFNRFSEIVSAGG 136          
BLAST of AM161907 vs. TrEMBL
Match: B9S425_RICCO (NAD dependent epimerase/dehydratase, putative OS=Ricinus communis GN=RCOM_0557820 PE=4 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.972e-29
Identity = 62/79 (78.48%), Postives = 72/79 (91.14%), Query Frame = 3
Query:    9 SKRFANHATFSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIASAGG 245
            S+RF+  ++F++ ASAA KKKVLI+NTNSGGHAVIGFYFAKELLG+GH VTI TVGDE+SDKMKKPPF+RFSEI SAGG
Sbjct:   59 SRRFSASSSFTVKASAAAKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTIFTVGDENSDKMKKPPFSRFSEIVSAGG 137          
BLAST of AM161907 vs. TrEMBL
Match: Q7X998_TOBAC (MRNA-binding protein (Fragment) OS=Nicotiana tabacum GN=csp41 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.188e-29
Identity = 63/79 (79.75%), Postives = 70/79 (88.61%), Query Frame = 3
Query:    9 SKRFANHATFSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIASAGG 245
            S+RF+    F++ ASAAEKKKVLI+NTNSGGHAVIGFYFAKELLG+GH VTILTVG+ESSDKMKK PFNRFSEI  AGG
Sbjct:   60 SRRFSTFQYFTVQASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHDVTILTVGEESSDKMKKTPFNRFSEITGAGG 138          
BLAST of AM161907 vs. TrEMBL
Match: B9GSN8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_830112 PE=4 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.972e-28
Identity = 61/72 (84.72%), Postives = 69/72 (95.83%), Query Frame = 3
Query:   30 ATFSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIASAGG 245
            ++F++ ASAAEKKKVLI+NTNSGGHAVIGFYFAKELLG+GH VTILTVG+ESSDKMKKPPF+RFSEI SAGG
Sbjct:   66 SSFTVKASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEESSDKMKKPPFSRFSEIVSAGG 137          
BLAST of AM161907 vs. TrEMBL
Match: B9H883_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_205442 PE=4 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.718e-27
Identity = 58/72 (80.56%), Postives = 67/72 (93.06%), Query Frame = 3
Query:   30 ATFSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIASAGG 245
            ++F + ASAAEKKK+LI+NTNSGGHAVIGFYFAKELLG+GH V+ILTVG+ESSDKMKKPPF+RFSEI  AGG
Sbjct:   39 SSFPVKASAAEKKKILIVNTNSGGHAVIGFYFAKELLGSGHEVSILTVGEESSDKMKKPPFSRFSEIVGAGG 110          
BLAST of AM161907 vs. TrEMBL
Match: A5AWW0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039540 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.196e-25
Identity = 58/81 (71.60%), Postives = 67/81 (82.72%), Query Frame = 3
Query:    3 LTSKRFANHATFSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIASAGG 245
            LTS       +FS     A+KKKVLI+NTNSGGHAVIGFYFAK+LLG+GH VTI+TVG+E+SDKMKKPPF+RFSEI SAGG
Sbjct:   50 LTSPTSTKRLSFSTLNVKAQKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTIMTVGEENSDKMKKPPFSRFSEITSAGG 130          
BLAST of AM161907 vs. TrEMBL
Match: D7LTD9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486816 PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.562e-25
Identity = 58/80 (72.50%), Postives = 65/80 (81.25%), Query Frame = 3
Query:    6 TSKRFANHATFSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIASAGG 245
            TS+R +       ++S  +KK VLI+NTNSGGHAVIGFYFAKELL AGH VTI+TVGDESSDKMKKPPFNRFSEI S GG
Sbjct:   62 TSRRLSPQGFTVKASSVGDKKNVLIVNTNSGGHAVIGFYFAKELLSAGHGVTIMTVGDESSDKMKKPPFNRFSEIISGGG 141          
BLAST of AM161907 vs. TrEMBL
Match: O24365_SPIOL (Chloroplast mRNA-binding protein CSP41 (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.753e-25
Identity = 57/70 (81.43%), Postives = 63/70 (90.00%), Query Frame = 3
Query:   39 SISASAA-EKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIASAGG 245
            SI+AS + +KKKVLI+NTNSGGHAVIGFYFAKELLG+GH VT+ TVGDE SDKMKKPPF RFSEI SAGG
Sbjct:   80 SINASTSTDKKKVLIVNTNSGGHAVIGFYFAKELLGSGHQVTVFTVGDEGSDKMKKPPFTRFSEITSAGG 149          
BLAST of AM161907 vs. TrEMBL
Match: C5XDB8_SORBI (Putative uncharacterized protein Sb02g006430 OS=Sorghum bicolor GN=Sb02g006430 PE=4 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.753e-25
Identity = 55/72 (76.39%), Postives = 63/72 (87.50%), Query Frame = 3
Query:   30 ATFSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIASAGG 245
            A   + A AA+K+ VLI+NTNSGGHAVIGFYFAKELL AGH+VT+LTVGDE SDKMKKPPF+RFSE+ SAGG
Sbjct:   63 AGVKVRAEAAKKQSVLIVNTNSGGHAVIGFYFAKELLAAGHAVTVLTVGDEGSDKMKKPPFSRFSELTSAGG 134          
BLAST of AM161907 vs. SwissProt
Match: Y3314_ARATH (Uncharacterized protein At3g63140, chloroplastic OS=Arabidopsis thaliana GN=At3g63140 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.389e-27
Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 3
Query:    6 TSKRFANHATFSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIASAGG 245
            TS+R +       ++S  EKK VLI+NTNSGGHAVIGFYFAKELL AGH+VTILTVGDESS+KMKKPPFNRFSEI S GG
Sbjct:   60 TSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGGG 139          
BLAST of AM161907 vs. TAIR peptide
Match: AT3G63140.1 (| Symbols: CSP41A | chloroplast stem-loop binding protein of 41 kDa | chr3:23327006-23328620 REVERSE LENGTH=406)

HSP 1 Score: 119.783 bits (299), Expect = 3.552e-28
Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 3
Query:    6 TSKRFANHATFSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIASAGG 245
            TS+R +       ++S  EKK VLI+NTNSGGHAVIGFYFAKELL AGH+VTILTVGDESS+KMKKPPFNRFSEI S GG
Sbjct:   60 TSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGGG 139          
The following BLAST results are available for this feature:
BLAST of AM161907 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TMG5_SOYBN2.658e-3389.87Putative uncharacterized protein OS=Glycine max PE... [more]
C6TM93_SOYBN5.922e-3387.50Putative uncharacterized protein OS=Glycine max PE... [more]
B9S425_RICCO3.972e-2978.48NAD dependent epimerase/dehydratase, putative OS=R... [more]
Q7X998_TOBAC5.188e-2979.75MRNA-binding protein (Fragment) OS=Nicotiana tabac... [more]
B9GSN8_POPTR1.972e-2884.72Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9H883_POPTR3.718e-2780.56Predicted protein (Fragment) OS=Populus trichocarp... [more]
A5AWW0_VITVI1.196e-2571.60Putative uncharacterized protein OS=Vitis vinifera... [more]
D7LTD9_ARALY1.562e-2572.50Putative uncharacterized protein OS=Arabidopsis ly... [more]
O24365_SPIOL7.753e-2581.43Chloroplast mRNA-binding protein CSP41 (Fragment) ... [more]
C5XDB8_SORBI7.753e-2576.39Putative uncharacterized protein Sb02g006430 OS=So... [more]
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BLAST of AM161907 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
Y3314_ARATH4.389e-2773.75Uncharacterized protein At3g63140, chloroplastic O... [more]
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BLAST of AM161907 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G63140.13.552e-2873.75| Symbols: CSP41A | chloroplast stem-loop binding ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.50.50.60no descriptioncoord: 15..67
score: 0.0
NoneNo IPR availablePANTHERPTHR10366NAD DEPENDENT EPIMERASE/DEHYDRATASEcoord: 32..62
score: 4.2
NoneNo IPR availablePANTHERPTHR10366:SF3NAD DEPENDENT EPIMERASE/DEHYDRATASEcoord: 32..62
score: 4.2
NoneNo IPR availableSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 14..67
score: 8.7

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>AM161907 ID=AM161907; Name=AM161907; organism=Pisum sativum; type=EST; length=248bp
CTTTAACTTCTAAACGTTTTGCTAACCATGCTACTTTCAGCATCAGTGCC
AGTGCTGCAGAGAAGAAGAAGGTGCTGATCATAAATACCAACAGTGGTGG
ACATGCTGTGATTGGATTCTACTTTGCAAAAGAGCTTCTTGGTGCTGGAC
ACTCTGTCACCATTCTCACTGTTGGTGATGAAAGCTCAGATAAGATGAAG
AAACCTCCTTTTAACAGATTCTCAGAAATTGCGAGTGCTGGAGGCAGT
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