AM162061

EST Overview
NameAM162061
Unique NameAM162061
TypeEST
OrganismPisum sativum (pea)
Sequence length160
Libraries
Library NameType
LIBEST_019360 Pisum sativum leaf vegetativecdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
[Close]
BLAST of AM162061 vs. TrEMBL
Match: Q3LSN5_PEA (Putative lipoic acid synthase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.449e-7
Identity = 33/53 (62.26%), Postives = 33/53 (62.26%), Query Frame = 1 
Query:    1 LKCAXXXXXXXXXXXXXXXAPSEFQQNLAGLRARLATESPSLSDFISLKSDKA 159
            L CA               APSE QQNLA LRARLA ESPSLSDFISLKSD A
Sbjct:   13 LNCAAKRLSSSSTTTTTTSAPSELQQNLAALRARLAMESPSLSDFISLKSDNA 65
[Close]
BLAST of AM162061 vs. TrEMBL
Match: Q3LSN4_PEA (Putative lipoic acid synthase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.449e-7
Identity = 33/53 (62.26%), Postives = 33/53 (62.26%), Query Frame = 1 
Query:    1 LKCAXXXXXXXXXXXXXXXAPSEFQQNLAGLRARLATESPSLSDFISLKSDKA 159
            L CA               APSE QQNLA LRARLA ESPSLSDFISLKSD A
Sbjct:   13 LNCAAKRLSSSSTTTTTTSAPSELQQNLAALRARLAMESPSLSDFISLKSDNA 65
The following BLAST results are available for this feature:
BLAST of AM162061 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
Q3LSN5_PEA1.449e-762.26Putative lipoic acid synthase OS=Pisum sativum PE=... [more]
Q3LSN4_PEA1.449e-762.26Putative lipoic acid synthase OS=Pisum sativum PE=... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 5..19
score
NoneNo IPR availableSEGsegsegcoord: 35..49
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>AM162061 ID=AM162061; Name=AM162061; organism=Pisum sativum; type=EST; length=160bp
CTCAAGTGCGCTACAAAAACCTTCTCTTCATCTTCCACCACCACCACAAC
CACCTCAGCTCCGTCTGAATTCCAGCAGAATCTGGCAGGACTTCGGGCTC
GGCTAGCGACCGAGTCACCATCTCTGTCGGACTTCATTTCCTTGAAATCG
GACAAAGCGT
back to top