EX569335

EST Overview


Name	EX569335
Unique Name	EX569335
Type	EST
Organism	Pisum sativum (pea)
Sequence length	225

Libraries


Library Name	Type
LIBEST_021973 Pisum sativum shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of EX569335 vs. TrEMBL
Match: B9SWZ0_RICCO (Exosome complex exonuclease RRP41, putative OS=Ricinus communis GN=RCOM_0490080 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.636e-33
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMD+KL
Sbjct:  129 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDAKL 201

[Close]

BLAST of EX569335 vs. TrEMBL
Match: A5BIU1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022853 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.636e-33
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMD+KL
Sbjct:  129 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDAKL 201

[Close]

BLAST of EX569335 vs. TrEMBL
Match: B9I8T9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_834773 PE=4 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 7.671e-33
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            GTRSACINAATLALADAGIPMRDLVTSCSAG+LNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMD+KL
Sbjct:  129 GTRSACINAATLALADAGIPMRDLVTSCSAGFLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDAKL 201

[Close]

BLAST of EX569335 vs. TrEMBL
Match: A9PK13_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 7.671e-33
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            GTRSACINAATLALADAGIPMRDLVTSCSAG+LNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMD+KL
Sbjct:  129 GTRSACINAATLALADAGIPMRDLVTSCSAGFLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDAKL 201

[Close]

BLAST of EX569335 vs. TrEMBL
Match: D7LSC2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486650 PE=4 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.468e-31
Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            GTRSACINAATLALADAGIPMRDL  SCSAGYLNSTPLLDLNYVEDSAGG DVTVGILPKLDKVTLLQMD+KL
Sbjct:  129 GTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGADVTVGILPKLDKVTLLQMDAKL 201

[Close]

BLAST of EX569335 vs. TrEMBL
Match: Q9SP08_ARATH (Exonuclease RRP41 OS=Arabidopsis thaliana GN=RRP41 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.180e-31
Identity = 68/73 (93.15%), Postives = 70/73 (95.89%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            GTRSACINAATLALADAGIPMRDL  SCSAGYLNSTPLLDLNYVEDSAGG DVTVGILPKLDKV+LLQMD+KL
Sbjct:  129 GTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGADVTVGILPKLDKVSLLQMDAKL 201

[Close]

BLAST of EX569335 vs. TrEMBL
Match: B9G2C8_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_28540 PE=4 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.078e-30
Identity = 65/73 (89.04%), Postives = 70/73 (95.89%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            GTR+ACINAATLALADAGIPMRD+VTSCSAGYL STPLLDLNY+EDSAGGPDVTVG L K+DKVTLLQMD+KL
Sbjct:  131 GTRAACINAATLALADAGIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGPDVTVGFLTKMDKVTLLQMDAKL 203

[Close]

BLAST of EX569335 vs. TrEMBL
Match: B8BDD9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30553 PE=4 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.078e-30
Identity = 65/73 (89.04%), Postives = 70/73 (95.89%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            GTR+ACINAATLALADAGIPMRD+VTSCSAGYL STPLLDLNY+EDSAGGPDVTVG L K+DKVTLLQMD+KL
Sbjct:  131 GTRAACINAATLALADAGIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGPDVTVGFLTKMDKVTLLQMDAKL 203

[Close]

BLAST of EX569335 vs. TrEMBL
Match: C5YZ99_SORBI (Putative uncharacterized protein Sb09g022550 OS=Sorghum bicolor GN=Sb09g022550 PE=4 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.354e-29
Identity = 66/73 (90.41%), Postives = 70/73 (95.89%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            GTRSACINAATLALADAGIPMRD+VTSCSAGYL STPLLDLNY+EDSAGG DVTVGIL K+DKVTLLQMD+KL
Sbjct:  131 GTRSACINAATLALADAGIPMRDIVTSCSAGYLCSTPLLDLNYLEDSAGGSDVTVGILAKMDKVTLLQMDAKL 203

[Close]

BLAST of EX569335 vs. TrEMBL
Match: C5YVG7_SORBI (Putative uncharacterized protein Sb09g028170 OS=Sorghum bicolor GN=Sb09g028170 PE=4 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.354e-29
Identity = 66/73 (90.41%), Postives = 70/73 (95.89%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            GTRSACINAATLALADAGIPMRD+VTSCSAGYL STPLLDLNY+EDSAGG DVTVGIL K+DKVTLLQMD+KL
Sbjct:  131 GTRSACINAATLALADAGIPMRDIVTSCSAGYLCSTPLLDLNYLEDSAGGSDVTVGILAKMDKVTLLQMDAKL 203

[Close]

BLAST of EX569335 vs. SwissProt
Match: EXOS4_MOUSE (Exosome complex exonuclease RRP41 OS=Mus musculus GN=Exosc4 PE=2 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 5.898e-19
Identity = 41/73 (56.16%), Postives = 59/73 (80.82%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            GT +AC+NAATLA+ DAGIPMRD V +CSAG+++ T L DL++VE++AGGP + + +LP   ++ LL+MDS+L
Sbjct:  133 GTYAACVNAATLAVMDAGIPMRDFVCACSAGFVDGTALADLSHVEEAAGGPQLALALLPASGQIALLEMDSRL 205

[Close]

BLAST of EX569335 vs. SwissProt
Match: EXOS4_HUMAN (Exosome complex exonuclease RRP41 OS=Homo sapiens GN=EXOSC4 PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 1.314e-18
Identity = 40/73 (54.79%), Postives = 59/73 (80.82%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            GT +AC+NAATLA+ DAGIPMRD V +CSAG+++ T L DL++VE++AGGP + + +LP   ++ LL+MD++L
Sbjct:  133 GTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDGTALADLSHVEEAAGGPQLALALLPASGQIALLEMDARL 205

[Close]

BLAST of EX569335 vs. SwissProt
Match: EXOS4_BOVIN (Exosome complex exonuclease RRP41 OS=Bos taurus GN=EXOSC4 PE=2 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 1.314e-18
Identity = 40/73 (54.79%), Postives = 59/73 (80.82%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            GT +AC+NAATLA+ DAGIPMRD V +CSAG+++ T L DL++VE++AGGP + + +LP   ++ LL+MD++L
Sbjct:  133 GTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDGTALADLSHVEEAAGGPQLALALLPASGQIALLEMDARL 205

[Close]

BLAST of EX569335 vs. SwissProt
Match: ECX1_PYRFU (Probable exosome complex exonuclease 1 OS=Pyrococcus furiosus GN=PF1568 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.674e-16
Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 2

Query:    2 AGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            AGTR A I AA+LALADAGIPMRDLV +CSAG +    +LDLN  ED+ G  DV V I+P  + +TLLQMD  L
Sbjct:  134 AGTRVAGITAASLALADAGIPMRDLVAACSAGKIEGEIVLDLNKEEDNYGEADVPVAIMPIKNDITLLQMDGYL 207

[Close]

BLAST of EX569335 vs. SwissProt
Match: ECX1_CENSY (Probable exosome complex exonuclease 1 OS=Cenarchaeum symbiosum GN=CENSYa_1536 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.674e-16
Identity = 40/73 (54.79%), Postives = 56/73 (76.71%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            G+R A + AA++ALADAGIPMRD+V++C+AG +  T +LD+N  ED AG  D+ VG +P LD+VTL+Q+D  L
Sbjct:  135 GSRCAALAAASVALADAGIPMRDMVSACAAGKVADTIVLDVNNEEDQAGQADMPVGYMPNLDQVTLIQLDGVL 207

[Close]

BLAST of EX569335 vs. SwissProt
Match: ECX1_THEON (Probable exosome complex exonuclease 1 OS=Thermococcus onnurineus (strain NA1) GN=TON_0030 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.972e-16
Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 2

Query:    2 AGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            AGTR A I AA+LALADAGIPMRDLV +C+AG +    +LDLN  ED+ G  DV V I+P  + +TLLQMD  L
Sbjct:  134 AGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEEDNYGEADVPVAIMPLKNDITLLQMDGYL 207

[Close]

BLAST of EX569335 vs. SwissProt
Match: ECX1_PYRHO (Probable exosome complex exonuclease 1 OS=Pyrococcus horikoshii GN=PH1549 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.972e-16
Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 2

Query:    2 AGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            AGTR A I AA+LALADAGIPMRDLV +C+AG +    +LDLN  ED+ G  DV V I+P  + +TLLQMD  L
Sbjct:  134 AGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEEDNYGEADVPVAIMPLKNDITLLQMDGYL 207

[Close]

BLAST of EX569335 vs. SwissProt
Match: ECX1_PYRAB (Probable exosome complex exonuclease 1 OS=Pyrococcus abyssi GN=PYRAB06100 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.972e-16
Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 2

Query:    2 AGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            AGTR A I AA+LALADAGIPMRDLV +C+AG +    +LDLN  ED+ G  DV V I+P  + +TLLQMD  L
Sbjct:  134 AGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEEDNYGEADVPVAIMPLKNDITLLQMDGYL 207

[Close]

BLAST of EX569335 vs. SwissProt
Match: ECX1_THEGJ (Probable exosome complex exonuclease 1 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=TGAM_2036 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.041e-15
Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 2

Query:    2 AGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            AGTR A I AA+LALADAG+PMRDLV +C+AG ++   +LDLN  ED+ G  DV V I+P  + +TLLQMD  L
Sbjct:  134 AGTRVAGITAASLALADAGVPMRDLVAACAAGKIDGEIVLDLNKDEDNYGEADVPVAIMPLKNDITLLQMDGYL 207

[Close]

BLAST of EX569335 vs. SwissProt
Match: ECX1_NITMS (Probable exosome complex exonuclease 1 OS=Nitrosopumilus maritimus (strain SCM1) GN=Nmar_0432 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.041e-15
Identity = 39/73 (53.42%), Postives = 54/73 (73.97%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            GTR A + AA++ALADAGIPMRD+V + +AG +  T +LD+N  ED AG  D+ +G +P L+K+TLLQ+D  L
Sbjct:  135 GTRCAALTAASVALADAGIPMRDMVAAIAAGKVADTVILDVNNEEDQAGQADMPIGYMPNLEKITLLQLDGVL 207

[Close]

BLAST of EX569335 vs. TAIR peptide
Match: AT3G61620.2 (| Symbols: RRP41 | 3'-5'-exoribonuclease family protein | chr3:22801382-22802910 REVERSE LENGTH=241)

HSP 1 Score: 136.732 bits (343), Expect = 2.765e-33
Identity = 68/73 (93.15%), Postives = 70/73 (95.89%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            GTRSACINAATLALADAGIPMRDL  SCSAGYLNSTPLLDLNYVEDSAGG DVTVGILPKLDKV+LLQMD+KL
Sbjct:  129 GTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGADVTVGILPKLDKVSLLQMDAKL 201

[Close]

BLAST of EX569335 vs. TAIR peptide
Match: AT3G61620.1 (| Symbols: RRP41 | 3'-5'-exoribonuclease family protein | chr3:22801382-22802910 REVERSE LENGTH=241)

HSP 1 Score: 136.732 bits (343), Expect = 2.765e-33
Identity = 68/73 (93.15%), Postives = 70/73 (95.89%), Query Frame = 2

Query:    5 GTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSKL 223
            GTRSACINAATLALADAGIPMRDL  SCSAGYLNSTPLLDLNYVEDSAGG DVTVGILPKLDKV+LLQMD+KL
Sbjct:  129 GTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGADVTVGILPKLDKVSLLQMDAKL 201

The following BLAST results are available for this feature:

BLAST of EX569335 vs. TrEMBL
BLAST of EX569335 vs. SwissProt
BLAST of EX569335 vs. TAIR peptide

BLAST of EX569335 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9SWZ0_RICCO	2.636e-33	98.63	Exosome complex exonuclease RRP41, putative OS=Ric...	[more]
A5BIU1_VITVI	2.636e-33	98.63	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9I8T9_POPTR	7.671e-33	97.26	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PK13_9ROSI	7.671e-33	97.26	Putative uncharacterized protein OS=Populus tricho...	[more]
D7LSC2_ARALY	2.468e-31	94.52	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9SP08_ARATH	7.180e-31	93.15	Exonuclease RRP41 OS=Arabidopsis thaliana GN=RRP41...	[more]
B9G2C8_ORYSJ	6.078e-30	89.04	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B8BDD9_ORYSI	6.078e-30	89.04	Putative uncharacterized protein OS=Oryza sativa s...	[more]
C5YZ99_SORBI	1.354e-29	90.41	Putative uncharacterized protein Sb09g022550 OS=So...	[more]
C5YVG7_SORBI	1.354e-29	90.41	Putative uncharacterized protein Sb09g028170 OS=So...	[more]

BLAST of EX569335 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
EXOS4_MOUSE	5.898e-19	56.16	Exosome complex exonuclease RRP41 OS=Mus musculus ...	[more]
EXOS4_HUMAN	1.314e-18	54.79	Exosome complex exonuclease RRP41 OS=Homo sapiens ...	[more]
EXOS4_BOVIN	1.314e-18	54.79	Exosome complex exonuclease RRP41 OS=Bos taurus GN...	[more]
ECX1_PYRFU	4.674e-16	60.81	Probable exosome complex exonuclease 1 OS=Pyrococc...	[more]
ECX1_CENSY	4.674e-16	54.79	Probable exosome complex exonuclease 1 OS=Cenarcha...	[more]
ECX1_THEON	7.972e-16	59.46	Probable exosome complex exonuclease 1 OS=Thermoco...	[more]
ECX1_PYRHO	7.972e-16	59.46	Probable exosome complex exonuclease 1 OS=Pyrococc...	[more]
ECX1_PYRAB	7.972e-16	59.46	Probable exosome complex exonuclease 1 OS=Pyrococc...	[more]
ECX1_THEGJ	1.041e-15	58.11	Probable exosome complex exonuclease 1 OS=Thermoco...	[more]
ECX1_NITMS	1.041e-15	53.42	Probable exosome complex exonuclease 1 OS=Nitrosop...	[more]

BLAST of EX569335 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G61620.2	2.765e-33	93.15	\| Symbols: RRP41 \| 3'-5'-exoribonuclease family pr...	[more]
AT3G61620.1	2.765e-33	93.15	\| Symbols: RRP41 \| 3'-5'-exoribonuclease family pr...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015847	Exoribonuclease, phosphorolytic domain 2	PFAM	PF03725	RNase_PH_C	coord: 24..73 score: 5.3
IPR015847	Exoribonuclease, phosphorolytic domain 2	SUPERFAMILY	55666	Ribonuclease PH domain 2-like	coord: 18..73 score: 3.1
None	No IPR available	PANTHER	PTHR11953	RIBONUCLEASE PH RELATED	coord: 1..74 score: 1.8

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EX569335 ID=EX569335; Name=EX569335; organism=Pisum sativum; type=EST; length=225bp
CGCAGGAACAAGGTCTGCTTGTATAAATGCTGCAACTCTGGCCCTAGCTG
ATGCTGGGATTCCCATGCGTGATCTTGTAACATCCTGTAGTGCTGGATAC
CTCAATAGCACCCCTCTACTTGATTTGAACTATGTAGAAGACAGTGCTGG
GGGTCCTGATGTAACCGTAGGAATTCTGCCGAAGTTGGATAAAGTGACGC
TTCTTCAGATGGATTCTAAACTACC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0000175	3'-5'-RNA exonuclease activity
GO:0003723	RNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006396	RNA processing

Vocabulary: **INTERPRO**
Term	Definition
IPR015847	ExoRNase_PH_dom2

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