EX571143
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX571143 vs. TrEMBL
Match: B9N4H9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_581872 PE=4 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 4.712e-9 Identity = 61/176 (34.66%), Postives = 70/176 (39.77%), Query Frame = 2 Query: 107 SPAGGKGPEKDNK---------GGEDSG------KKKIKKVQCAGEXXXXXXXXXXXXXXNNGLSSASNG--APAHSGSEFLCPGKV-VGH-VNLSPTRQQPYMMYPETCYPPLVQQHATYNRLCPMGTMDCPSYYVPPLPYMCAGLDRDSYQFQSAPLIPFEFFSDENANGCSIM 577 SP GG+ P D K GG G KKK KK AG NN + A + APA +GS L V + H N SP RQ Y T Y P V +A + + T SYY PP Y C D + P FE FSDEN N CSIM Sbjct: 147 SPGGGQSPVTDKKVDGQSEVGAGGSAGGGKKKKKKKKKKKAHTAGN--------------NNPVDEAEHSVRAPAGTGSPTLGNVHVQIAHPTNHSPQRQHVYDYPATTYYAPTV--YAVSSHVACPSTFYGASYYSPPYSYACMHPPSDLDTYPPQPSGSFEIFSDENPNACSIM 306
BLAST of EX571143 vs. TrEMBL
Match: D7T6F1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017753001 PE=4 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 6.804e-8 Identity = 57/171 (33.33%), Postives = 71/171 (41.52%), Query Frame = 2 Query: 95 SPEKSPAGGKGPEKDNKGGEDS--------GKKKIKKVQCAGEXXXXXXXXXXXXXXNNGLSSASNGAPAHSGSEFLCPG--KVVGHVNLSPTRQQPYMMYPETCYPPLVQQHATYNRLCPMGTMDCPSYYVPPLPYMCAGLDRDSYQFQSAPLIPFEFFSDENANGCSIM 577 +PEK+PA P ++KG E GKKK KK Q S +G PA +GS PG +V+G VNLSPTRQ+P YP T +P V A+Y+ P + P PY FE FSDEN N CSI+ Sbjct: 176 APEKAPASDHPPAVEHKGSESGCGTGKSGGGKKKKKKGQKGNNTQGGPP------------GSQLSGVPAGTGSPAHNPGTDQVMGTVNLSPTRQEP-CPYPPTFFPHPVYV-ASYSTAHPS---------ISPYPYT------------------FEIFSDENPNSCSII 305
BLAST of EX571143 vs. TrEMBL
Match: D7KQ41_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_474782 PE=4 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 9.825e-7 Identity = 33/88 (37.50%), Postives = 41/88 (46.59%), Query Frame = 2 Query: 329 NLSPTRQQPYMMYPETCYPPLVQQHATYNRLCPMGTMDCPSYYVPPLPYMCAGLDR-----DSYQFQSAPLIPFEFFSDENANGCSIM 577 N +P R Y Y P V +YN P ++D SYY PP PY A + D +Q P FE FSDEN NGCS++ Sbjct: 268 NNNPPRHDMYPYPAAGYYAPQVMYGVSYNVAQPPVSVDAASYYTPPPPYSYAYMHNGYQPSDQNPYQPRPSDSFELFSDENPNGCSVI 355
BLAST of EX571143 vs. TAIR peptide
Match: AT1G56210.1 (| Symbols: | Heavy metal transport/detoxification superfamily protein | chr1:21035715-21037019 FORWARD LENGTH=364) HSP 1 Score: 56.225 bits (134), Expect = 1.939e-8 Identity = 33/86 (38.37%), Postives = 40/86 (46.51%), Query Frame = 2 Query: 335 SPTRQQPYMMYPETCYPPLVQQHATYNRLCPMGTMDCPSYYVPPLPYMCAGLDR-----DSYQFQSAPLIPFEFFSDENANGCSIM 577 +P R Y + Y P V +YN P ++D SYY PP PY A + D Q P FE FSDEN NGC+IM Sbjct: 279 NPPRHDLYPYPAQGYYAPQVMYGVSYNVAQPPVSVDAASYYTPPPPYSYAYMHNGYQPSDQNPCQPRPSDSFELFSDENPNGCAIM 364 The following BLAST results are available for this feature:
BLAST of EX571143 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 3
BLAST of EX571143 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX571143 ID=EX571143; Name=EX571143; organism=Pisum sativum; type=EST; length=691bpback to top |