EX571143

EST Overview
NameEX571143
Unique NameEX571143
TypeEST
OrganismPisum sativum (pea)
Sequence length691
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of EX571143 vs. TrEMBL
Match: B9N4H9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_581872 PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 4.712e-9
Identity = 61/176 (34.66%), Postives = 70/176 (39.77%), Query Frame = 2
Query:  107 SPAGGKGPEKDNK---------GGEDSG------KKKIKKVQCAGEXXXXXXXXXXXXXXNNGLSSASNG--APAHSGSEFLCPGKV-VGH-VNLSPTRQQPYMMYPETCYPPLVQQHATYNRLCPMGTMDCPSYYVPPLPYMCAGLDRDSYQFQSAPLIPFEFFSDENANGCSIM 577
            SP GG+ P  D K         GG   G      KKK KK   AG               NN +  A +   APA +GS  L    V + H  N SP RQ  Y     T Y P V  +A  + +    T    SYY PP  Y C     D   +   P   FE FSDEN N CSIM
Sbjct:  147 SPGGGQSPVTDKKVDGQSEVGAGGSAGGGKKKKKKKKKKKAHTAGN--------------NNPVDEAEHSVRAPAGTGSPTLGNVHVQIAHPTNHSPQRQHVYDYPATTYYAPTV--YAVSSHVACPSTFYGASYYSPPYSYACMHPPSDLDTYPPQPSGSFEIFSDENPNACSIM 306          
BLAST of EX571143 vs. TrEMBL
Match: D7T6F1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017753001 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 6.804e-8
Identity = 57/171 (33.33%), Postives = 71/171 (41.52%), Query Frame = 2
Query:   95 SPEKSPAGGKGPEKDNKGGEDS--------GKKKIKKVQCAGEXXXXXXXXXXXXXXNNGLSSASNGAPAHSGSEFLCPG--KVVGHVNLSPTRQQPYMMYPETCYPPLVQQHATYNRLCPMGTMDCPSYYVPPLPYMCAGLDRDSYQFQSAPLIPFEFFSDENANGCSIM 577
            +PEK+PA    P  ++KG E          GKKK KK Q                       S  +G PA +GS    PG  +V+G VNLSPTRQ+P   YP T +P  V   A+Y+   P          + P PY                   FE FSDEN N CSI+
Sbjct:  176 APEKAPASDHPPAVEHKGSESGCGTGKSGGGKKKKKKGQKGNNTQGGPP------------GSQLSGVPAGTGSPAHNPGTDQVMGTVNLSPTRQEP-CPYPPTFFPHPVYV-ASYSTAHPS---------ISPYPYT------------------FEIFSDENPNSCSII 305          
BLAST of EX571143 vs. TrEMBL
Match: D7KQ41_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_474782 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 9.825e-7
Identity = 33/88 (37.50%), Postives = 41/88 (46.59%), Query Frame = 2
Query:  329 NLSPTRQQPYMMYPETCYPPLVQQHATYNRLCPMGTMDCPSYYVPPLPYMCAGLDR-----DSYQFQSAPLIPFEFFSDENANGCSIM 577
            N +P R   Y       Y P V    +YN   P  ++D  SYY PP PY  A +       D   +Q  P   FE FSDEN NGCS++
Sbjct:  268 NNNPPRHDMYPYPAAGYYAPQVMYGVSYNVAQPPVSVDAASYYTPPPPYSYAYMHNGYQPSDQNPYQPRPSDSFELFSDENPNGCSVI 355          
BLAST of EX571143 vs. TAIR peptide
Match: AT1G56210.1 (| Symbols: | Heavy metal transport/detoxification superfamily protein | chr1:21035715-21037019 FORWARD LENGTH=364)

HSP 1 Score: 56.225 bits (134), Expect = 1.939e-8
Identity = 33/86 (38.37%), Postives = 40/86 (46.51%), Query Frame = 2
Query:  335 SPTRQQPYMMYPETCYPPLVQQHATYNRLCPMGTMDCPSYYVPPLPYMCAGLDR-----DSYQFQSAPLIPFEFFSDENANGCSIM 577
            +P R   Y    +  Y P V    +YN   P  ++D  SYY PP PY  A +       D    Q  P   FE FSDEN NGC+IM
Sbjct:  279 NPPRHDLYPYPAQGYYAPQVMYGVSYNVAQPPVSVDAASYYTPPPPYSYAYMHNGYQPSDQNPCQPRPSDSFELFSDENPNGCAIM 364          
The following BLAST results are available for this feature:
BLAST of EX571143 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
B9N4H9_POPTR4.712e-934.66Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7T6F1_VITVI6.804e-833.33Whole genome shotgun sequence of line PN40024, sca... [more]
D7KQ41_ARALY9.825e-737.50Putative uncharacterized protein OS=Arabidopsis ly... [more]
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BLAST of EX571143 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G56210.11.939e-838.37| Symbols: | Heavy metal transport/detoxification... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 21..30
score: NAcoord: 67..80
score
NoneNo IPR availableSEGsegsegcoord: 31..49
score
NoneNo IPR availableSEGsegsegcoord: 6..19
score: NAcoord: 27..41
score: NAcoord: 64..71
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX571143 ID=EX571143; Name=EX571143; organism=Pisum sativum; type=EST; length=691bp
AACAATTCTTCAGGAAATAGTACTGAATTCAACCGTAGTTCAGTTGTTGA
AAATGCTGGTGAAAAAAAACAGTAGTAAAACAAAAACTAAGGGGTCGCCG
GAAAAGTCTCCGGCAGGTGGTAAGGGACCGGAAAAGGACAACAAGGGAGG
AGAGGATTCTGGGAAGAAGAAGATAAAGAAAGTTCAGTGTGCTGGTGAAA
CTGGAACTGGAACTAGAACTAGAACTAGAACTAGAACCAGAAACAATGGG
TTGAGTTCAGCATCTAACGGTGCGCCTGCACACAGTGGATCAGAATTCCT
TTGTCCAGGTAAGGTAGTGGGCCACGTGAATCTCAGCCCTACACGTCAGC
AACCGTACATGATGTATCCAGAAACGTGTTATCCTCCTTTGGTACAACAA
CATGCTACATACAACAGATTATGTCCCATGGGTACAATGGATTGTCCTTC
TTACTATGTTCCGCCATTACCCTACATGTGTGCAGGCCTTGATCGTGACT
CTTATCAGTTTCAATCTGCACCGTTGATTCCATTTGAGTTTTTTAGTGAT
GAAAATGCAAATGGGTGCTCTATTATGTGATGTTGCACTTTTAACTGGTT
TTGGTTTGTTCTCTTATAGGATAGTTTTGTTGTGTTATGGTAATTTTGTA
ATTTAGGGAAATTTAGCTAAGCATTATGTTTTTGGTTTTTT
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