AM162073

EST Overview
NameAM162073
Unique NameAM162073
TypeEST
OrganismPisum sativum (pea)
Sequence length536
Libraries
Library NameType
LIBEST_019360 Pisum sativum leaf vegetativecdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of AM162073 vs. TrEMBL
Match: B9GXD4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_413838 PE=4 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 5.247e-36
Identity = 82/126 (65.08%), Postives = 92/126 (73.02%), Query Frame = 1
Query:  157 FFPDFYRTVVYSYKKQKKDYEDRIKIQKADAEERKKMKALEAESGWTXXXXXXXXXXXXXXXXNPYLKMTKQFMKSGARVRRAQNRRVPQYLERGADVKFTDVAGLGKIRLELEEIVESSSHHGRY 534
            FF  FYRTVV SY+KQKKDY+DR+KI+KADAEERKKM+ LE E                    NPYLKM  QFMKSGARVRRA N+R+PQYLERG DVKF+DVAGLGKIRLELEEIV+  +H   Y
Sbjct:  284 FFVIFYRTVVLSYRKQKKDYDDRLKIEKADAEERKKMRELEREL-MGIEEEEEDESVPGKAEQNPYLKMAMQFMKSGARVRRAHNKRLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMY 408          
BLAST of AM162073 vs. TrEMBL
Match: D7U0E5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017029001 PE=4 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.994e-35
Identity = 80/126 (63.49%), Postives = 92/126 (73.02%), Query Frame = 1
Query:  157 FFPDFYRTVVYSYKKQKKDYEDRIKIQKADAEERKKMKALEAESGWTXXXXXXXXXXXXXXXXNPYLKMTKQFMKSGARVRRAQNRRVPQYLERGADVKFTDVAGLGKIRLELEEIVESSSHHGRY 534
            FF  FYRTVV SY+KQKKDYEDR+KI+KA+AEE+KKM+ LE +                    NPY+KM  QFMKSGARVRRA N+R+PQYLERG DVKFTDVAGLGKIRLELEEIV+  +H   Y
Sbjct:  340 FFYIFYRTVVLSYRKQKKDYEDRLKIEKAEAEEKKKMRELERQL--EGIEGGEDESEIVGGEQNPYMKMAMQFMKSGARVRRAHNKRLPQYLERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMY 463          
BLAST of AM162073 vs. TrEMBL
Match: B9RQG8_RICCO (Cell division protein ftsH, putative OS=Ricinus communis GN=RCOM_1491270 PE=4 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.442e-35
Identity = 81/126 (64.29%), Postives = 91/126 (72.22%), Query Frame = 1
Query:  157 FFPDFYRTVVYSYKKQKKDYEDRIKIQKADAEERKKMKALEAESGWTXXXXXXXXXXXXXXXXNPYLKMTKQFMKSGARVRRAQNRRVPQYLERGADVKFTDVAGLGKIRLELEEIVESSSHHGRY 534
            FF  FYRTVV SY+KQKKDYEDR+KI+KA+AEERKKM+ LE E                    N YLKM  QFM+SGARVRRA NRR+PQYLERG DVKF+DVAGLGKIRLELEEIV+  +H   Y
Sbjct:  320 FFVIFYRTVVLSYRKQKKDYEDRLKIEKAEAEERKKMRELEREM-MGIEDEEEDESEQGKGEKNAYLKMAMQFMRSGARVRRAHNRRLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMY 444          
BLAST of AM162073 vs. TrEMBL
Match: D7L5M9_ARALY (EMB2083 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479081 PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.205e-34
Identity = 78/126 (61.90%), Postives = 91/126 (72.22%), Query Frame = 1
Query:  157 FFPDFYRTVVYSYKKQKKDYEDRIKIQKADAEERKKMKALEAESGWTXXXXXXXXXXXXXXXXNPYLKMTKQFMKSGARVRRAQNRRVPQYLERGADVKFTDVAGLGKIRLELEEIVESSSHHGRY 534
            FF  FYR VV +Y+KQKKDYEDR+KI+KA+A+ERKKM+ LE E                    NPYL+M  QFMKSGARVRRA N+R+P+YLERG DVKFTDVAGLGKIRLELEEIV+  +H   Y
Sbjct:  310 FFYIFYRVVVLNYRKQKKDYEDRLKIEKAEADERKKMRELEREM--EGIEEEDEELEEGTGEKNPYLQMAMQFMKSGARVRRASNKRLPEYLERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMY 433          
BLAST of AM162073 vs. TrEMBL
Match: A8MPR5_ARATH (Uncharacterized protein At3g16290.1 OS=Arabidopsis thaliana GN=At3g16290 PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.205e-34
Identity = 78/126 (61.90%), Postives = 91/126 (72.22%), Query Frame = 1
Query:  157 FFPDFYRTVVYSYKKQKKDYEDRIKIQKADAEERKKMKALEAESGWTXXXXXXXXXXXXXXXXNPYLKMTKQFMKSGARVRRAQNRRVPQYLERGADVKFTDVAGLGKIRLELEEIVESSSHHGRY 534
            FF  FYR VV +Y+KQKKDYEDR+KI+KA+A+ERKKM+ LE E                    NPYL+M  QFMKSGARVRRA N+R+P+YLERG DVKFTDVAGLGKIRLELEEIV+  +H   Y
Sbjct:  312 FFYIFYRVVVLNYRKQKKDYEDRLKIEKAEADERKKMRELEREM--EGIEEEDEEVEEGTGEKNPYLQMAMQFMKSGARVRRASNKRLPEYLERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMY 435          
BLAST of AM162073 vs. TrEMBL
Match: A9SCI8_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_210834 PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.443e-25
Identity = 66/126 (52.38%), Postives = 83/126 (65.87%), Query Frame = 1
Query:  157 FFPDFYRTVVYSYKKQKKDYEDRIKIQKADAEERKKMKALEAESGWTXXXXXXXXXXXXXXXXNPYLKMTKQFMKSGARVRRAQNRRVPQYLERGADVKFTDVAGLGKIRLELEEIVESSSHHGRY 534
            FF  FY+TVV   KK+K+DYEDR+KI+ A+ EER+KM+  E+E                    NP L+M  +FMKSGARVRRA+ RR PQYL+  ADVKF DVAGLG IR ELEEIV+  ++  +Y
Sbjct:  240 FFWLFYQTVVVGVKKRKQDYEDRLKIEAAEEEERRKMREWESEM----EAAEEEKKRLEELEKNPQLQMGMKFMKSGARVRRAKGRRPPQYLDLDADVKFADVAGLGDIRKELEEIVDFFTYGEKY 361          
BLAST of AM162073 vs. TAIR peptide
Match: AT3G16290.1 (| Symbols: EMB2083 | AAA-type ATPase family protein | chr3:5521187-5524995 REVERSE LENGTH=876)

HSP 1 Score: 148.673 bits (374), Expect = 1.831e-36
Identity = 78/126 (61.90%), Postives = 91/126 (72.22%), Query Frame = 1
Query:  157 FFPDFYRTVVYSYKKQKKDYEDRIKIQKADAEERKKMKALEAESGWTXXXXXXXXXXXXXXXXNPYLKMTKQFMKSGARVRRAQNRRVPQYLERGADVKFTDVAGLGKIRLELEEIVESSSHHGRY 534
            FF  FYR VV +Y+KQKKDYEDR+KI+KA+A+ERKKM+ LE E                    NPYL+M  QFMKSGARVRRA N+R+P+YLERG DVKFTDVAGLGKIRLELEEIV+  +H   Y
Sbjct:  312 FFYIFYRVVVLNYRKQKKDYEDRLKIEKAEADERKKMRELEREM--EGIEEEDEEVEEGTGEKNPYLQMAMQFMKSGARVRRASNKRLPEYLERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMY 435          
The following BLAST results are available for this feature:
BLAST of AM162073 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
B9GXD4_POPTR5.247e-3665.08Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7U0E5_VITVI1.994e-3563.49Whole genome shotgun sequence of line PN40024, sca... [more]
B9RQG8_RICCO4.442e-3564.29Cell division protein ftsH, putative OS=Ricinus co... [more]
D7L5M9_ARALY2.205e-3461.90EMB2083 OS=Arabidopsis lyrata subsp. lyrata GN=ARA... [more]
A8MPR5_ARATH2.205e-3461.90Uncharacterized protein At3g16290.1 OS=Arabidopsis... [more]
A9SCI8_PHYPA2.443e-2552.38Predicted protein OS=Physcomitrella patens subsp. ... [more]
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BLAST of AM162073 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G16290.11.831e-3661.90| Symbols: EMB2083 | AAA-type ATPase family protei... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23076METALLOPROTEASE M41 FTSHcoord: 6..122
score: 3.8
NoneNo IPR availablePANTHERPTHR23076:SF3FTSH HOMOLOGcoord: 6..122
score: 3.8
NoneNo IPR availableSEGsegsegcoord: 53..68
score
NoneNo IPR availableSEGsegsegcoord: 2..17
score: NAcoord: 76..88
score
NoneNo IPR availableSEGsegsegcoord: 83..108
score: NAcoord: 149..172
score
NoneNo IPR availableSEGsegsegcoord: 55..75
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>AM162073 ID=AM162073; Name=AM162073; organism=Pisum sativum; type=EST; length=536bp
GAATGAGAAGAGAAAGAAGGAGAGAGAAAAGAGAGAGAAAAGGAAGAAAG
AGTATAGGCAAAGAATGCTTGAAGTTAAGAACAGTTCGTTTATGAATGCC
AATCTTTGGTATCGAATGGCAAAGGATAAAGCTGTGATTAATGCACTTGG
AGTGGTTTTTTTCCTGATTTTTATAGGACTGTGGTGTATAGCTATAAGAA
ACAGAAGAAAGATTATGAGGACAGGATTAAGATTCAGAAAGCTGATGCTG
AGGAGAGGAAGAAGATGAAGGCGTTGGAAGCCGAATCGGGGTGGACTGAA
GCTGGTGCTGATGATGATGAAGGTGAGCCAGGGGAAGTAGATGAGAATCC
TTATTTGAAAATGACAAAGCAGTTTATGAAATCGGGGGCACGAGTTCGAA
GAGCGCAGAATAGAAGGGTTCCTCAGTATCTTGAGAGAGGTGCCGATGTG
AAGTTTACTGATGTTGCTGGTCTTGGTAAAATACGGCTTGAACTTGAGGA
GATTGTAGAAAGTTCTTCACATCATGGAAGATATGT
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