FG528814

EST Overview
NameFG528814
Unique NameFG528814
TypeEST
OrganismPisum sativum (pea)
Sequence length527
Libraries
Library NameType
LIBEST_023214 MeriC Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
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BLAST of FG528814 vs. TrEMBL
Match: B9N9C2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_674781 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 7.619e-8
Identity = 27/34 (79.41%), Postives = 29/34 (85.29%), Query Frame = 3 
Query:   75 HFAAPHGYPNYYHSQSGISMEHQQQNPRDASLAG 176
            HF AP GYPNYYHSQSG+S+EHQQQN RD SL G
Sbjct:  265 HFGAP-GYPNYYHSQSGMSLEHQQQNTRDGSLGG 297
[Close]
BLAST of FG528814 vs. TrEMBL
Match: D7TJZ7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021389001 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.895e-7
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 3 
Query:   75 HFAAPHGYPNYYHSQSGISMEHQQQNPRDASLAG 176
            HF A  GYPN+YHSQ+GIS+EHQQQNPRD SL+G
Sbjct:  750 HFGAL-GYPNFYHSQAGISLEHQQQNPRDGSLSG 782
The following BLAST results are available for this feature:
BLAST of FG528814 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
B9N9C2_POPTR7.619e-879.41Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TJZ7_VITVI2.895e-776.47Whole genome shotgun sequence of line PN40024, sca... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 2..24
score: NAcoord: 59..70
score
NoneNo IPR availableSEGsegsegcoord: 37..48
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG528814 ID=FG528814; Name=FG528814; organism=Pisum sativum; type=EST; length=527bp
TATACAGCTTCCAGGGACAGAATCAACAACAACAACAACAAAGTGTATTT
CGGCAAAGCCAGCAGCCATCACAGCATTTTGCTGCACCCCATGGATATCC
TAATTACTACCATTCTCAGAGTGGAATTTCTATGGAACATCAGCAGCAGA
ACCCTAGGGATGCTTCCCTTGCTGGCTCTCAAAGCCAACCACCTAAGCAG
TCCCAACAACAGTTATGGCAAAACAGTTACTAATCCTAATCACCTCCCGG
TTTTTAAGGGGCTTGATGTGATGTCAGTTTGAGAAAATGACCATTCAATC
CGAGGCGTTCCCCATTGGTCTAAATGTTCCATTGTTTGGTCTGAATAGAC
CTGATATGGCCGCTGCCCCCATGTGACGGAAGTTGTATTCTACATAATTT
ATGTGCTTGTGATGTTAACTTAGGTTTTAAGTGTGCTAATTTGTGTACTG
CGTACAATAGACCCTTTTTTTTTCCATTTTACAATTTTCTCATCTTGCTA
TAGTGAAAATTTCGTATTTTGGCTCNN
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