FG528872

EST Overview


Name	FG528872
Unique Name	FG528872
Type	EST
Organism	Pisum sativum (pea)
Sequence length	566

Libraries


Library Name	Type
LIBEST_023214 MeriC Pisum sativum Shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of FG528872 vs. TrEMBL
Match: Q1SN35_MEDTR (Ribosomal protein L24E OS=Medicago truncatula GN=MtrDRAFT_AC139525g5v2 PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.156e-50
Identity = 108/147 (73.47%), Postives = 110/147 (74.83%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREIXXXXXXXXXXXXXXXXXXXXXXXXGVGKGNVT 449
            MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSK KRYFHNKLKPSKLTWTAM+RKQHKKDIAQE           PYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI                         VGKGNV+
Sbjct:    1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREIKERVKKTKDEKKAKKAESQAKAQKSVGKGNVS 147

[Close]

BLAST of FG528872 vs. TrEMBL
Match: B7FGN9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.345e-49
Identity = 100/115 (86.96%), Postives = 102/115 (88.70%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 353
            MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSK KRYFHNKLKPSKLTWTAM+RKQHKKDIAQE           PYSRSIVG TLEVIQKKR+EKPEVRDAAREAALREI
Sbjct:    1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGTTLEVIQKKRTEKPEVRDAAREAALREI 115

[Close]

BLAST of FG528872 vs. TrEMBL
Match: B7FN60_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.082e-48
Identity = 100/115 (86.96%), Postives = 102/115 (88.70%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 353
            MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSK KRYFHNKLKPSKL WTAM+RKQHKKDIAQE           PYSRSIVGATLEVIQKKR+EKPEVRDAAREAALREI
Sbjct:    1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLIWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 115

[Close]

BLAST of FG528872 vs. TrEMBL
Match: Q2XPV7_SOLTU (Ribosomal protein L24-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.149e-48
Identity = 103/147 (70.07%), Postives = 108/147 (73.47%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREIXXXXXXXXXXXXXXXXXXXXXXXXGVGKGNVT 449
            MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSK K YFHN+LKPSKLTWTAM+RKQHKKDIAQE           PYSRSIVGATLEVIQKKR+E+PEVRDAAREAALREI                          GKGNV+
Sbjct:    1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKHYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVRKRRRATKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKSQKAGGKGNVS 147

[Close]

BLAST of FG528872 vs. TrEMBL
Match: A9PHF8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_813781 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.149e-48
Identity = 99/115 (86.09%), Postives = 101/115 (87.83%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 353
            MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLF NSK KRYFHNKLKPSKLTWTAM+RKQHKKDIA E           PYSRSIVGATLEVIQKKR+EKPEVRDAAREAALREI
Sbjct:    1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFANSKCKRYFHNKLKPSKLTWTAMYRKQHKKDIAAETVKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115

[Close]

BLAST of FG528872 vs. TrEMBL
Match: B9SRL5_RICCO (60S ribosomal protein L24, putative OS=Ricinus communis GN=RCOM_0840480 PE=4 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.015e-48
Identity = 97/115 (84.35%), Postives = 102/115 (88.70%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 353
            MVLKTELCRFSGAKIYPG+GIRFIRSDSQVFLF NSK KRYFHN+LKPSKLTWTAM+RKQHKKDIAQE           PYSRSIVGATLEVIQK+R+EKPEVRDAAREAALREI
Sbjct:   23 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 137

[Close]

BLAST of FG528872 vs. TrEMBL
Match: D7LJ56_ARALY (RPL24A OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_482640 PE=4 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.162e-48
Identity = 98/115 (85.22%), Postives = 100/115 (86.96%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 353
            MVLKTELCRFSG KIYPGRGIRFIRSDSQVFLF NSK KRYFHNKLKPSKLTWTAM+RKQHKKD AQE           PYSRSIVGATLEVIQKKR+EKPEVRDAAREAALREI
Sbjct:    1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFANSKCKRYFHNKLKPSKLTWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115

[Close]

BLAST of FG528872 vs. TrEMBL
Match: C6SVV1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.162e-48
Identity = 101/147 (68.71%), Postives = 107/147 (72.79%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREIXXXXXXXXXXXXXXXXXXXXXXXXGVGKGNVT 449
            MVLKTELCRFSGAKIYPG+GIRF+R DSQVFLF NSK KRYFHN+LKPSKLTWTAM+RKQHKKDIAQE           PYSRSIVGATLEVIQKKR+EKPEVRDAAREAALREI                          GKGNV+
Sbjct:    1 MVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVRKRRRAAKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVASKSQKAGGKGNVS 147

[Close]

BLAST of FG528872 vs. TrEMBL
Match: B9ID62_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_824919 PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.563e-47
Identity = 97/115 (84.35%), Postives = 101/115 (87.83%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 353
            MVLKTELCRFSGAKIYPG+GIRFIRSDSQVFLF NSK KRYFHN+LKPSKLTWTAM+RKQHKKDIA E           PYSRSIVGATLEVIQKKR+EKPEVRDAAREAALREI
Sbjct:    1 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAETIKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 115

[Close]

BLAST of FG528872 vs. TrEMBL
Match: A9P8N0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1121327 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.563e-47
Identity = 97/115 (84.35%), Postives = 101/115 (87.83%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 353
            MVLKTELCRFSGAKIYPG+GIRFIRSDSQVFLF NSK KRYFHN+LKPSKLTWTAM+RKQHKKDIA E           PYSRSIVGATLEVIQKKR+EKPEVRDAAREAALREI
Sbjct:    1 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAETIKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 115

[Close]

BLAST of FG528872 vs. SwissProt
Match: RL24_PRUAV (60S ribosomal protein L24 OS=Prunus avium GN=RPL24 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.210e-49
Identity = 97/115 (84.35%), Postives = 102/115 (88.70%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 353
            MVLKTELCRFSGAKIYPG+GIRFIRSDSQVFLF NSK KRYFHN+LKPSKLTWTAM+RKQHKKDIAQE           PYSRSIVGATLEVIQK+R+EKPEVRDAAREAALREI
Sbjct:    1 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 115

[Close]

BLAST of FG528872 vs. SwissProt
Match: RL24_CICAR (60S ribosomal protein L24 OS=Cicer arietinum GN=RPL24 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 6.804e-49
Identity = 103/146 (70.55%), Postives = 105/146 (71.92%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREIXXXXXXXXXXXXXXXXXXXXXXXXGVGKGNV 446
            MVLKTELCRFSGAKIYPGRGIRFIR DSQVFLFVNSK KRYFHN+LKPSKLTWTAM RKQHKKD AQE           PYSRSIVGATLEVIQKKR+EKPEVRDAAREAALREI                          GKGNV
Sbjct:    1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVASKAQKSQGKGNV 146

[Close]

BLAST of FG528872 vs. SwissProt
Match: RL242_ARATH (60S ribosomal protein L24-2 OS=Arabidopsis thaliana GN=RPL24B PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 1.980e-48
Identity = 97/115 (84.35%), Postives = 100/115 (86.96%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 353
            MVLKTELCRFSG KIYPGRGIRFIRSDSQVFLF+NSK KRYFHNKLKPSKL WTAM+RKQHKKD AQE           PYSRSIVGATLEVIQKKR+EKPEVRDAAREAALREI
Sbjct:    1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115

[Close]

BLAST of FG528872 vs. SwissProt
Match: RL241_ARATH (60S ribosomal protein L24-1 OS=Arabidopsis thaliana GN=RPL24A PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 2.585e-48
Identity = 97/115 (84.35%), Postives = 100/115 (86.96%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 353
            MVLKTELCRFSG KIYPGRGIRFIRSDSQVFLF+NSK KRYFHNKLKPSKL WTAM+RKQHKKD AQE           PYSRSIVGATLEVIQKKR+EKPEVRDAAREAALREI
Sbjct:    1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115

[Close]

BLAST of FG528872 vs. SwissProt
Match: RL24_HORVU (60S ribosomal protein L24 OS=Hordeum vulgare GN=RPL24 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.420e-46
Identity = 93/115 (80.87%), Postives = 98/115 (85.22%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 353
            MVLKTELCRFSG KIYPG+GIRFIRSDSQVFLF NSK KRYFHN+LKP+KL WTAM+RKQHKKDI  E           PYSRSIVGATLEVIQKKR+EKPEVRDAAREAALREI
Sbjct:    1 MVLKTELCRFSGQKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPAKLCWTAMYRKQHKKDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115

[Close]

BLAST of FG528872 vs. SwissProt
Match: RL24B_SCHPO (60S ribosomal protein L24-B OS=Schizosaccharomyces pombe GN=rpl24b PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.413e-23
Identity = 51/112 (45.54%), Postives = 76/112 (67.86%), Query Frame = 3

Query:   15 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRE 350
            +K E+C FSG+K+YPG G  F+R D++VF FVN K +  F  +  P +L+WT ++R+ HKK I++E            + R IVGA L+VI++KR+++PEVR AAR AAL++
Sbjct:    1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEE-HAKKRTRRTVKHQRGIVGANLDVIKEKRNQRPEVRAAARAAALKQ 111

[Close]

BLAST of FG528872 vs. SwissProt
Match: RL24A_SCHPO (60S ribosomal protein L24-A OS=Schizosaccharomyces pombe GN=rpl24a PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.413e-23
Identity = 51/112 (45.54%), Postives = 76/112 (67.86%), Query Frame = 3

Query:   15 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRE 350
            +K E+C FSG+K+YPG G  F+R D++VF FVN K +  F  +  P +L+WT ++R+ HKK I++E            + R IVGA L+VI++KR+++PEVR AAR AAL++
Sbjct:    1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEE-HAKKRTRRTVKHQRGIVGANLDVIKEKRNQRPEVRAAARAAALKQ 111

[Close]

BLAST of FG528872 vs. SwissProt
Match: RL24_DEBHA (60S ribosomal protein L24 OS=Debaryomyces hansenii GN=RPL24 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.694e-21
Identity = 50/110 (45.45%), Postives = 72/110 (65.45%), Query Frame = 3

Query:   15 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAAL 344
            +K EL  FSG KIYPGRG  F+R DS++F F +SK    FH +  P +++WT ++R+QHKK I++E              R+IVGA+LE+I+++RS+KP  R AAR+  L
Sbjct:    1 MKVELDSFSGTKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRISWTVLYRRQHKKGISEE-SAKRRTRKTVKNQRAIVGASLELIKERRSQKPSDRKAARDVKL 109

[Close]

BLAST of FG528872 vs. SwissProt
Match: RL24_KLULA (60S ribosomal protein L24 OS=Kluyveromyces lactis GN=RPL24 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.337e-20
Identity = 48/107 (44.86%), Postives = 69/107 (64.49%), Query Frame = 3

Query:   15 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAARE 335
            +K E+  FSGAKIYPGRG  F+R DS++F F +SK    FH +  P ++ WT ++R+ HKK I +E              R++VGA+LE+I+++RS KPEVR A R+
Sbjct:    1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITEEVARKRTRKSVKA-QRAVVGASLELIKERRSLKPEVRKAQRD 106

[Close]

BLAST of FG528872 vs. SwissProt
Match: RL24_DICDI (60S ribosomal protein L24 OS=Dictyostelium discoideum GN=rpl24 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.337e-20
Identity = 49/113 (43.36%), Postives = 73/113 (64.60%), Query Frame = 3

Query:   15 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 353
            +KT LC +S  KIYP RG++F+R DS+VF F+N+K +  F  K+ P  + W+ ++R+ + K+   +              R+IVGA+LEVIQ+KR++KPEV+ AA E A REI
Sbjct:    1 MKTSLCNYSEFKIYPARGMKFVRGDSKVFHFINTKVESLFFRKINPRDIRWSMVYRRIY-KNTTTDVSAKKKARKTKKVERNIVGASLEVIQQKRAQKPEVKQAAAEQAKREI 112

[Close]

BLAST of FG528872 vs. TAIR peptide
Match: AT3G53020.1 (| Symbols: STV1, RPL24B, RPL24 | Ribosomal protein L24e family protein | chr3:19660749-19661912 REVERSE LENGTH=163)

HSP 1 Score: 191.815 bits (486), Expect = 2.110e-49
Identity = 97/115 (84.35%), Postives = 100/115 (86.96%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 353
            MVLKTELCRFSG KIYPGRGIRFIRSDSQVFLF+NSK KRYFHNKLKPSKL WTAM+RKQHKKD AQE           PYSRSIVGATLEVIQKKR+EKPEVRDAAREAALREI
Sbjct:    1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115

[Close]

BLAST of FG528872 vs. TAIR peptide
Match: AT2G36620.1 (| Symbols: RPL24A | ribosomal protein L24 | chr2:15350548-15351819 REVERSE LENGTH=164)

HSP 1 Score: 191.43 bits (485), Expect = 2.756e-49
Identity = 97/115 (84.35%), Postives = 100/115 (86.96%), Query Frame = 3

Query:    9 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 353
            MVLKTELCRFSG KIYPGRGIRFIRSDSQVFLF+NSK KRYFHNKLKPSKL WTAM+RKQHKKD AQE           PYSRSIVGATLEVIQKKR+EKPEVRDAAREAALREI
Sbjct:    1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115

[Close]

BLAST of FG528872 vs. TAIR peptide
Match: AT2G44860.2 (| Symbols: | Ribosomal protein L24e family protein | chr2:18501034-18502128 REVERSE LENGTH=159)

HSP 1 Score: 65.855 bits (159), Expect = 1.746e-11
Identity = 33/95 (34.74%), Postives = 50/95 (52.63%), Query Frame = 3

Query:   15 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXP--YSRSIVGATLEVIQK 293
            ++ E C F  + IYPG GI+F+R+D+++F F  SK  + F  K  P K+ WT   R  H KD+ ++           P  Y R++   TL  I+K
Sbjct:    1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHGKDMTKDTTFEFEKKRNRPERYDRNVTENTLMAIKK 95

[Close]

BLAST of FG528872 vs. TAIR peptide
Match: AT2G44860.1 (| Symbols: | Ribosomal protein L24e family protein | chr2:18501034-18502128 REVERSE LENGTH=159)

HSP 1 Score: 65.855 bits (159), Expect = 1.746e-11
Identity = 33/95 (34.74%), Postives = 50/95 (52.63%), Query Frame = 3

Query:   15 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKFKRYFHNKLKPSKLTWTAMHRKQHKKDIAQEXXXXXXXXXXXP--YSRSIVGATLEVIQK 293
            ++ E C F  + IYPG GI+F+R+D+++F F  SK  + F  K  P K+ WT   R  H KD+ ++           P  Y R++   TL  I+K
Sbjct:    1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHGKDMTKDTTFEFEKKRNRPERYDRNVTENTLMAIKK 95

The following BLAST results are available for this feature:

BLAST of FG528872 vs. TrEMBL
BLAST of FG528872 vs. SwissProt
BLAST of FG528872 vs. TAIR peptide

BLAST of FG528872 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q1SN35_MEDTR	1.156e-50	73.47	Ribosomal protein L24E OS=Medicago truncatula GN=M...	[more]
B7FGN9_MEDTR	6.345e-49	86.96	Putative uncharacterized protein OS=Medicago trunc...	[more]
B7FN60_MEDTR	1.082e-48	86.96	Putative uncharacterized protein OS=Medicago trunc...	[more]
Q2XPV7_SOLTU	3.149e-48	70.07	Ribosomal protein L24-like protein OS=Solanum tube...	[more]
A9PHF8_POPTR	3.149e-48	86.09	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SRL5_RICCO	7.015e-48	84.35	60S ribosomal protein L24, putative OS=Ricinus com...	[more]
D7LJ56_ARALY	9.162e-48	85.22	RPL24A OS=Arabidopsis lyrata subsp. lyrata GN=ARAL...	[more]
C6SVV1_SOYBN	9.162e-48	68.71	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9ID62_POPTR	1.563e-47	84.35	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9P8N0_POPTR	1.563e-47	84.35	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of FG528872 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL24_PRUAV	5.210e-49	84.35	60S ribosomal protein L24 OS=Prunus avium GN=RPL24...	[more]
RL24_CICAR	6.804e-49	70.55	60S ribosomal protein L24 OS=Cicer arietinum GN=RP...	[more]
RL242_ARATH	1.980e-48	84.35	60S ribosomal protein L24-2 OS=Arabidopsis thalian...	[more]
RL241_ARATH	2.585e-48	84.35	60S ribosomal protein L24-1 OS=Arabidopsis thalian...	[more]
RL24_HORVU	2.420e-46	80.87	60S ribosomal protein L24 OS=Hordeum vulgare GN=RP...	[more]
RL24B_SCHPO	6.413e-23	45.54	60S ribosomal protein L24-B OS=Schizosaccharomyces...	[more]
RL24A_SCHPO	6.413e-23	45.54	60S ribosomal protein L24-A OS=Schizosaccharomyces...	[more]
RL24_DEBHA	2.694e-21	45.45	60S ribosomal protein L24 OS=Debaryomyces hansenii...	[more]
RL24_KLULA	1.337e-20	44.86	60S ribosomal protein L24 OS=Kluyveromyces lactis ...	[more]
RL24_DICDI	1.337e-20	43.36	60S ribosomal protein L24 OS=Dictyostelium discoid...	[more]

BLAST of FG528872 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT3G53020.1	2.110e-49	84.35	\| Symbols: STV1, RPL24B, RPL24 \| Ribosomal protein...	[more]
AT2G36620.1	2.756e-49	84.35	\| Symbols: RPL24A \| ribosomal protein L24 \| chr2:1...	[more]
AT2G44860.2	1.746e-11	34.74	\| Symbols: \| Ribosomal protein L24e family protei...	[more]
AT2G44860.1	1.746e-11	34.74	\| Symbols: \| Ribosomal protein L24e family protei...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000988	Ribosomal protein L24e	GENE3D	2.30.170.20	no description	coord: 6..69 score: 2.1
IPR000988	Ribosomal protein L24e	PANTHER	PTHR10792	60S RIBOSOMAL PROTEIN L24	coord: 6..166 score: 1.3
IPR000988	Ribosomal protein L24e	PFAM	PF01246	Ribosomal_L24e	coord: 5..75 score: 7.3
IPR000988	Ribosomal protein L24e	PROSITE	PS01073	RIBOSOMAL_L24E	coord: 12..29 score
None	No IPR available	PANTHER	PTHR10792:SF1	60S RIBOSOMAL PROTEIN L24	coord: 6..166 score: 1.3
None	No IPR available	SEG	seg	seg	coord: 71..81 score: NAcoord: 118..141 score: NAcoord: 150..165 score
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 8..60 score: 4.7
None	No IPR available	SEG	seg	seg	coord: 25..29 score
None	No IPR available	SEG	seg	seg	coord: 9..36 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG528872 ID=FG528872; Name=FG528872; organism=Pisum sativum; type=EST; length=566bp
TAAGCAAAATGGTTCTCAAGACCGAGCTGTGCCGTTTTAGTGGTGCCAAG
ATCTATCCTGGGAGGGGAATCAGATTTATCCGAAGTGATTCACAGGTTTT
CCTTTTCGTTAATTCGAAATTCAAAAGGTACTTCCATAACAAGTTGAAGC
CATCCAAGCTTACCTGGACTGCCATGCACCGGAAGCAACATAAGAAGGAC
ATTGCCCAAGAAGCTGCAAAGAAGAGGCGCAGAGCTACCAAAAAGCCTTA
CTCAAGGTCTATTGTTGGTGCAACTTTGGAAGTTATTCAGAAGAAAAGAT
CAGAGAAGCCTGAGGTTCGCGATGCTGCCAGAGAAGCTGCTCTTCGTGAA
ATTAAGGAGAGAGTGAAGAAAACCAAGGATGAGAAGAAGGCAAAGAAGGC
AGAAAGTCAAGCTAAGGCACAAAAGGGTGTAGGAAAAGGGAATGTTACCA
AGGGTGCTGCATCAAAAGGTCCTAAGCTTGGTGGTGGAGGCGGAAAGCGC
TGAACACTTGGTGTGTTGGATTTTTGGATAGCTCTCGAGTAGAGTTTTGA
AATTTTTGCTTTGATA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR000988	Ribosomal_eL24-rel

Search form