H1O01, H1O01 (genetic_marker) Cicer arietinum | PulseDB

Marker Overview

Marker Overview


Name	H1O01
Genbank ID	N/A
Type	SSR
Species	Cicer arietinum
Germplasm	Hadas
Repeat Motif	(TG)16 (TA)5
Primer 1	H1O01.Forward primer: GCCGTTCTGCCATAAGATT
Primer 2	H1O01.Reverse primer: AGCCCGTAAGTGGTATCCAA
Product Length	194
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold352	supercontig	scaffold352:73084..73277 .
scaffold352	chromosome	scaffold352:73084..73277 .

Publications


Year	Publication
2005	Lichtenzveig J, Scheuring C, Dodge J, Abbo S, Zhang HB. Construction of BAC and BIBAC libraries and their applications for generation of SSR markers for genome analysis of chickpea, Cicer arietinum L. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2005 Feb; 110(3):492-510.

Germplasm


Stock Name	Type
Hadas	accession

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	chickpea-ICC4958xPI489777-RIL-2011	LG5	N/A	76.2	H1O01	View
2	chickpea-ICC4958xPI489777-RIL-F10	LG5	N/A	81.61	H1O01	View
3	chickpea-ICC4958xPI489777-RIL-F10-2012	LG05	N/A	76.06	H1O01	View
4	chickpea-ICC3996xILWC184-F2	LG5	N/A	14.3	H1O01	View
5	chickpea-ICC4958xPI489777-RIL-2010	LG5	N/A	161.4	H1O01	View