CaPOPII_781, CaPOPII_781 (genetic_marker) Cicer spp. | PulseDB

Marker Overview

Marker Overview


Name	CaPOPII_781
Genbank ID	N/A
Type	Indel
Species	Cicer spp.
Primer 1	CaPOPII_781.Forward: GACTTGTGGTTGCACG TGAT
Primer 2	CaPOPII_781.Reverse: GGGCTTGTTTGACGCA TTAT
Publication	[view all]
Contact	Swarup K. Parida

Contact

Name

Details

Swarup K. Parida

First name:	Swarup
Last name:	Parida
Institution:	National Institute of Plant Genome Research
Address:	Aruna Asaf Ali Marg, New Delhi 110067, India
Country:	India
Email:	swarup@nipgr.ac.in
Last update:	Apr 2018

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Ca2	chromosome	Ca2:32393435..32393879 .	Cicer arietinum CDC Frontier genome v1.0	PCD marker alignment to genome using primer sequences
chr2	chromosome	chr2:32393435..32393879 .	Cicer arietinum CDC Frontier NCBI RefSeq v1	PCD marker alignment to genome using primer sequences

Publications


Year	Publication
2016	Srivastava R, Singh M, Bajaj D, Parida S. A High-Resolution InDel (Insertion–Deletion) Markers-Anchored Consensus Genetic Map Identifies Major QTLs Governing Pod Number and Seed Yield in Chickpea. Frontiers in Plant Science. 2016; 7(1362):1-14.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Chickpea-pusa1103_Pusa256_x_ILWC46-F5	LG02	N/A	54.1	CaPOPII_781	View