BMc-014 | PulseDB

Marker Overview

Marker Overview


Name	BMc-014
Genbank ID	HO212331
Type	EST-SSR
Species	Phaseolus vulgaris
Repeat Motif	(AT)7(GA)4
Primer 1	BMc-014.Forward: TGTCTGCACAGCTCTGATTC
Primer 2	BMc-014.Reverse: CCTTTCCAACACACCACTGA
Product Length	127
Publication	[view all]
Contact	Matthew Blair

Contact

Name

Details

Matthew Blair

First name:	Matthew
Last name:	Blair
Institution:	International Center for Tropical Agriculture
Country:	Colombia
Email:	mwblaircgiar@gmail.com
Last update:	Aug 2009

References

External references for this genetic_marker


Database	Accession
DB:genbank	HO212331

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr06	supercontig	Chr06:21701175..21701301 .	Phaseolus vulgaris G19833 genome v2.1	PCD marker alignment to genome using primer sequences
Chr06_WLD	supercontig	Chr06_WLD:17299751..17299881 .	Phaseolus acutifolius acc. W6 15578 genome v2.0	PCD marker alignment to genome using primer sequences

Publications


Year	Publication
2011	Blair MW, Hurtado N, Chavarro CM, Muñoz-Torres MC, Giraldo MC, Pedraza F, Tomkins J, Wing R. Gene-based SSR markers for common bean (Phaseolus vulgaris L.) derived from root and leaf tissue ESTs: an integration of the BMc series. BMC plant biology. 2011 Mar 22; 11:50.