BMc-017 | PulseDB

Marker Overview

Marker Overview


Name	BMc-017
Genbank ID	HO212334
Type	EST-SSR
Species	Phaseolus vulgaris
Repeat Motif	(ACA)2(CAA)5
Primer 1	BMc-017.Forward: TGCAGGGTTCACAGTCAGAG
Primer 2	BMc-017.Reverse: CAAACCAGCAGCAACAAGAG
Product Length	103
Publication	[view all]
Contact	Matthew Blair

Contact

Name

Details

Matthew Blair

First name:	Matthew
Last name:	Blair
Institution:	International Center for Tropical Agriculture
Country:	Colombia
Email:	mwblaircgiar@gmail.com
Last update:	Aug 2009

References

External references for this genetic_marker


Database	Accession
DB:genbank	HO212334

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr10	supercontig	Chr10:8105581..8105683 .	Phaseolus vulgaris G19833 genome v2.1	PCD marker alignment to genome using primer sequences
Chr10_WLD	supercontig	Chr10_WLD:7162913..7163015 .	Phaseolus acutifolius acc. W6 15578 genome v2.0	PCD marker alignment to genome using primer sequences

Publications


Year	Publication
2011	Blair MW, Hurtado N, Chavarro CM, Muñoz-Torres MC, Giraldo MC, Pedraza F, Tomkins J, Wing R. Gene-based SSR markers for common bean (Phaseolus vulgaris L.) derived from root and leaf tissue ESTs: an integration of the BMc series. BMC plant biology. 2011 Mar 22; 11:50.