BMb-0414 | PulseDB

Marker Overview

Marker Overview


Name	BMb-0414
Genbank ID	N/A
Type	SSR
Species	Phaseolus vulgaris
Repeat Motif	(AT)17
Primer 1	BMb-0414.Forward: CCATGATGATTGTTGTTTGA
Primer 2	BMb-0414.Reverse: AGTGTTTCGGTCGTCATAAT
Product Length	212
Publication	[view all]
Contact	Matthew Blair

Contact

Name

Details

Matthew Blair

First name:	Matthew
Last name:	Blair
Institution:	International Center for Tropical Agriculture
Country:	Colombia
Email:	mwblaircgiar@gmail.com
Last update:	Aug 2009

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr07	supercontig	Chr07:16872764..16872973 .	Phaseolus vulgaris G19833 genome v2.1	PCD marker alignment to genome using primer sequences

Publications


Year	Publication
2014	Blair MW, Córdoba JM, Muñóz C, Yuyó DK. BAC-end microsatellites from intra and inter-genic regions of the common bean genome and their correlation with cytogenetic features. PloS one. 2014; 9(9):e101873.
2010	Córdoba JM, Chavarro C, Schlueter JA, Jackson SA, Blair MW. Integration of physical and genetic maps of common bean through BAC-derived microsatellite markers. BMC genomics. 2010 Jul 16; 11:436.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Bean-DOR364/G19833-RIL	LG10	N/A	119.7	BMb414	View
2	Bean-DOR364/G19833-RIL-2010	LG10	N/A	93.7	BMb414	View
3	Bean-PMB0225/PHA1037-RIL	LG10	N/A	7	BMb414	View
4	Bean-PMB0225/PHA1037-RIL-2015	LG10	N/A	44.7	BMb414	View
5	Bean-Tiber/Starozagorski-RIL	LG10	N/A	61.66	BMb414	View