BMb-1679s | PulseDB

Marker Overview

Marker Overview


Name	BMb-1679s
Genbank ID	N/A
Type	SSR
Species	Phaseolus vulgaris
Repeat Motif	(TA)8
Primer 1	BMb-1679s.Forward: AGGTTTTGGTCTATCCTAGT
Primer 2	BMb-1679s.Reverse: AGTACATGTCTCAATCCTCTC
Product Length	334
Publication	[view all]
Contact	Matthew Blair

Contact

Name

Details

Matthew Blair

First name:	Matthew
Last name:	Blair
Institution:	International Center for Tropical Agriculture
Country:	Colombia
Email:	mwblaircgiar@gmail.com
Last update:	Aug 2009

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr04	supercontig	Chr04:41553765..41554098 .	Phaseolus vulgaris G19833 genome v2.1	PCD marker alignment to genome using primer sequences
Pl04_G27455	supercontig	Pl04_G27455:43772378..43772707 .	Phaseolus lunatus cv. G27455 genome v1.0	PCD marker alignment to genome using primer sequences

Publications


Year	Publication
2014	Blair MW, Córdoba JM, Muñóz C, Yuyó DK. BAC-end microsatellites from intra and inter-genic regions of the common bean genome and their correlation with cytogenetic features. PloS one. 2014; 9(9):e101873.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Bean-DOR364/G19833-RIL	LG04	N/A	76.4	BMb1679s	View