BM-0157 | PulseDB

Marker Overview

Marker Overview


Name	BM-0157
Genbank ID	N/A
Type	SSR
Species	Phaseolus vulgaris
Repeat Motif	(GA)16
Primer 1	BM-0157.Forward: ACTTAACAAGGAATAGCCACACA
Primer 2	BM-0157.Reverse: GTTAATTGTTTCCAATATCAACCTG
Product Length	113
Publication	[view all]
Contact	Matthew Blair J. Tohme

Contact

Name

Details

Matthew Blair

First name:	Matthew
Last name:	Blair
Institution:	International Center for Tropical Agriculture
Country:	Colombia
Email:	mwblaircgiar@gmail.com
Last update:	Aug 2009

J. Tohme

First name:	J
Last name:	Tohme
Institution:	International Center for Tropical Agriculture
Email:	j.tohme@cgiar.org
Last update:	Nov 2002

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr10	supercontig	Chr10:10005813..10005925 .
Vu10	supercontig	Vu10:438390..438501 .
Scaffold133612-KQ483928.1	supercontig	Scaffold133612-KQ483928.1:71952..72053 .
chr09	chromosome	chr09:7690884..7691003 .
Chr_11-CM003381.1	supercontig	Chr_11-CM003381.1:25972119..25972249 .

Publications


Year	Publication
2010	Córdoba JM, Chavarro C, Schlueter JA, Jackson SA, Blair MW. Integration of physical and genetic maps of common bean through BAC-derived microsatellite markers. BMC genomics. 2010 Jul 16; 11:436.
2002	Gaitan-Solis E, Duque MC, Edwards KJ, Tohme J. Microsatellite Repeats in Common Bean (Phaseolus vulgaris): Isolation, Characterization, and Cross-Species Amplification in Phaseolus ssp.. Crop Science. 2002; 42:2128-2136.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Bean-DOR364/G19833-RIL-2010	LG10	N/A	20	BM157	View
2	Bean-Beluga/PHA0399-RIL	LG10	N/A	6.24	BM157	View
3	Bean-Gonzalez_consensus_map-2016	LG10	N/A	8.9	BM157	View
4	Bean-PHA0419/Beluga-RIL	LG10	N/A	18.33	BM157	View
5	Bean-DOR364/G19833-RIL-2008	LG10	N/A	201.4	BM157	View
6	Bean-AND277/Milenio-BC2F3	LG10	N/A	26.54	SSR_BM157	View