BM-0159 | PulseDB

Marker Overview

Marker Overview


Name	BM-0159
Genbank ID	N/A
Type	SSR
Species	Phaseolus vulgaris
Repeat Motif	(CT)9(CA)8
Primer 1	BM-0159.Forward: GGTGCTGTTGCTGCTGTTAT
Primer 2	BM-0159.Reverse: GGGAGATGTGGTAAGATAATGAAA
Product Length	198
Publication	[view all]
Contact	Matthew Blair J. Tohme

Contact

Name

Details

Matthew Blair

First name:	Matthew
Last name:	Blair
Institution:	International Center for Tropical Agriculture
Country:	Colombia
Email:	mwblaircgiar@gmail.com
Last update:	Aug 2009

J. Tohme

First name:	J
Last name:	Tohme
Institution:	International Center for Tropical Agriculture
Email:	j.tohme@cgiar.org
Last update:	Nov 2002

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr03	supercontig	Chr03:39802104..39802301 .
Chr03_WLD	supercontig	Chr03_WLD:27173113..27173300 .

Publications


Year	Publication
2010	Córdoba JM, Chavarro C, Schlueter JA, Jackson SA, Blair MW. Integration of physical and genetic maps of common bean through BAC-derived microsatellite markers. BMC genomics. 2010 Jul 16; 11:436.
2002	Gaitan-Solis E, Duque MC, Edwards KJ, Tohme J. Microsatellite Repeats in Common Bean (Phaseolus vulgaris): Isolation, Characterization, and Cross-Species Amplification in Phaseolus ssp.. Crop Science. 2002; 42:2128-2136.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Bean-DOR364/G19833-RIL-2010	LG03	N/A	44.6	BM159	View
2	Bean-PMB0225/PHA1037-RIL	LG03	N/A	36	BM159	View
3	Bean-PMB0225/PHA1037-RIL-2015	LG03	N/A	70.6	BM159	View
4	Bean-Cerinza/G10022-BC2	LG03	N/A	263.4	BM159	View
5	Bean-Cerinza/G10022-BC2-2012	LG03	N/A	217.9	BM159	View
6	Bean-DOR364/G19833-RIL-2008	LG03	N/A	124.7	BM159	View
7	Bean-AND277/Milenio-BC2F3	LG03	N/A	130.19	SSR_BM159	View