BM-0197 | PulseDB

Marker Overview

Marker Overview


Name	BM-0197
Genbank ID	N/A
Type	SSR
Species	Phaseolus vulgaris
Repeat Motif	(GT)8
Primer 1	BM-0197.Forward: TGGACTGGTCGATACGAAGC
Primer 2	BM-0197.Reverse: CCCAGAAGATTGAGAACACCAC
Product Length	201
Publication	[view all]
Contact	Matthew Blair J. Tohme

Contact

Name

Details

Matthew Blair

First name:	Matthew
Last name:	Blair
Institution:	International Center for Tropical Agriculture
Country:	Colombia
Email:	mwblaircgiar@gmail.com
Last update:	Aug 2009

J. Tohme

First name:	J
Last name:	Tohme
Institution:	International Center for Tropical Agriculture
Email:	j.tohme@cgiar.org
Last update:	Nov 2002

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr03	supercontig	Chr03:36828160..36828360 .
Pl03_G27455	supercontig	Pl03_G27455:27893039..27893237 .
Chr03_WLD	supercontig	Chr03_WLD:26287798..26287994 .

Publications


Year	Publication
2010	Córdoba JM, Chavarro C, Schlueter JA, Jackson SA, Blair MW. Integration of physical and genetic maps of common bean through BAC-derived microsatellite markers. BMC genomics. 2010 Jul 16; 11:436.
2002	Gaitan-Solis E, Duque MC, Edwards KJ, Tohme J. Microsatellite Repeats in Common Bean (Phaseolus vulgaris): Isolation, Characterization, and Cross-Species Amplification in Phaseolus ssp.. Crop Science. 2002; 42:2128-2136.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Bean-DOR364/G19833-RIL-2010	LG03	N/A	48.8	BM197	View
2	Bean-Cerinza/G10022-BC2	LG03	N/A	244.2	BM197	View
3	Bean-Cerinza/G10022-BC2-2012	LG03	N/A	202.6	BM197	View
4	Bean-DOR364/G19833-RIL-2008	LG03	N/A	124.7	BM197	View