BMd-0005 | PulseDB

Marker Overview

Marker Overview


Name	BMd-0005
Genbank ID	AJ132438
Type	SSR
Species	Phaseolus coccineus
Repeat Motif	(CAA)5
Primer 1	BMd-0005.Forward: CGTGGACTTGAATGGTTTCAG
Primer 2	BMd-0005.Reverse: TCCTTACCCTGTTCTGCTTCTC
Product Length	122
Publication	[view all]
Contact	Matthew Blair
Comment	GA 2-oxidase

Contact

Name

Details

Matthew Blair

First name:	Matthew
Last name:	Blair
Institution:	International Center for Tropical Agriculture
Country:	Colombia
Email:	mwblaircgiar@gmail.com
Last update:	Aug 2009

References

External references for this genetic_marker


Database	Accession
DB:genbank	AJ132438

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr06	supercontig	Chr06:26788551..26788669 .	Phaseolus vulgaris G19833 genome v2.1	PCD marker alignment to genome using primer sequences
Chr06_WLD	supercontig	Chr06_WLD:22394446..22394564 .	Phaseolus acutifolius acc. W6 15578 genome v2.0	PCD marker alignment to genome using primer sequences

Publications


Year	Publication
2003	Blair MW, Pedraza F, Buendia HF, Gaitán-Solís E, Beebe SE, Gepts P, Tohme J. Development of a genome-wide anchored microsatellite map for common bean (Phaseolus vulgaris L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2003 Nov; 107(8):1362-74.