BMd-0035 | PulseDB

Marker Overview

Marker Overview


Name	BMd-0035
Genbank ID	AX008671
Type	SSR
Species	Phaseolus coccineus
Repeat Motif	(CAA)5
Primer 1	BMd-0035.Forward: TCTCTTCCTTACCCTGTTCTGC
Primer 2	BMd-0035.Reverse: GCGTGGACTTGAATGGTTTC
Product Length	128
Publication	[view all]
Contact	Matthew Blair
Comment	GA 2-oxidase gene

Contact

Name

Details

Matthew Blair

First name:	Matthew
Last name:	Blair
Institution:	International Center for Tropical Agriculture
Country:	Colombia
Email:	mwblaircgiar@gmail.com
Last update:	Aug 2009

References

External references for this genetic_marker


Database	Accession
DB:genbank	AX008671

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr06	supercontig	Chr06:26788546..26788670 .	Phaseolus vulgaris G19833 genome v2.1	PCD marker alignment to genome using primer sequences
Chr06_WLD	supercontig	Chr06_WLD:22394441..22394565 .	Phaseolus acutifolius acc. W6 15578 genome v2.0	PCD marker alignment to genome using primer sequences

Publications


Year	Publication
2003	Blair MW, Pedraza F, Buendia HF, Gaitán-Solís E, Beebe SE, Gepts P, Tohme J. Development of a genome-wide anchored microsatellite map for common bean (Phaseolus vulgaris L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2003 Nov; 107(8):1362-74.