Cc_v2.0_07376.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cc_v2.0_07376.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TU20|A0A151TU20_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_009773 PE=4 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.389e-37 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 Query: 113 MATFGGYGAQFLMAVMVMGLFYVTNTVAQESEIAPTSQLETGAGFALSVSSVTLCSSVLASLVAFMMQ 180 MATFGGYGAQFLMAVMVMGLFYVTNTVAQESEIAPTSQLETGAGFALSVSSVTLCSSVLASLVAFMMQ Sbjct: 1 MATFGGYGAQFLMAVMVMGLFYVTNTVAQESEIAPTSQLETGAGFALSVSSVTLCSSVLASLVAFMMQ 68
BLAST of Cc_v2.0_07376.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7CVP6|V7CVP6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G136900g PE=4 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.978e-23 Identity = 50/68 (73.53%), Postives = 57/68 (83.82%), Query Frame = 0 Query: 113 MATFGGYGAQFLMAVMVMGLFYVTNTVAQESEIAPTSQLETGAGFALSVSSVTLCSSVLASLVAFMMQ 180 MA GG+ AQF +AVM++ +FYVT VAQES IAPTSQ+ETGAGFALSVS VTL SSVLAS+VA MMQ Sbjct: 1 MAKLGGFEAQFCIAVMILSMFYVTKIVAQESAIAPTSQMETGAGFALSVSEVTLYSSVLASVVALMMQ 68
BLAST of Cc_v2.0_07376.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6MUU8|A0A4D6MUU8_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g239 PE=4 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.365e-23 Identity = 49/68 (72.06%), Postives = 58/68 (85.29%), Query Frame = 0 Query: 113 MATFGGYGAQFLMAVMVMGLFYVTNTVAQESEIAPTSQLETGAGFALSVSSVTLCSSVLASLVAFMMQ 180 MA FG + A+ LM VM++G+F VTN VAQ+SEIAPT QLETGAGFAL VS+V +CSSVLASLVAFM+Q Sbjct: 1 MAPFGRFTAEILMTVMIVGMFCVTNIVAQDSEIAPTGQLETGAGFALPVSAVIMCSSVLASLVAFMLQ 68
BLAST of Cc_v2.0_07376.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA87B926|A0AA87B926_9FABA (Uncharacterized protein (Fragment) OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS30828 PE=4 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.953e-23 Identity = 52/71 (73.24%), Postives = 57/71 (80.28%), Query Frame = 0 Query: 35 DAYWNKAKKDKTEAPTKEPTRGMVAEAPLAPAGPGAGAGTSAAATAALTEAAAMRRAQVTFFMFMMSKINI 105 +AYWNKAKK+KTEAPTKEPT G AEAPL GPGAGA TSA A A LTEAAAMR AQVTF M MM+K+ + Sbjct: 2 NAYWNKAKKEKTEAPTKEPTSGKAAEAPL--LGPGAGAATSAVAMAELTEAAAMRTAQVTFLMSMMNKMRL 70
BLAST of Cc_v2.0_07376.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7BKQ8|V7BKQ8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G255700g PE=4 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.226e-22 Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = 0 Query: 113 MATFGGYGAQFLMAVMVMGLFYVTNTVAQESEIAPTSQLETGAGFALSVSSVTLCSSVLASLVAFMMQ 180 MA FG + A+ L+A+M++G+F VTN VAQ+SEIAPT QLE GAGFAL VS V +CSSVLASLVAFM+Q Sbjct: 1 MAPFGRFTAEVLIALMILGMFCVTNIVAQDSEIAPTGQLEAGAGFALPVSKVIMCSSVLASLVAFMLQ 68
BLAST of Cc_v2.0_07376.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1JG62|I1JG62_SOYBN (PGG domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_02G180500 PE=4 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.341e-22 Identity = 49/68 (72.06%), Postives = 55/68 (80.88%), Query Frame = 0 Query: 113 MATFGGYGAQFLMAVMVMGLFYVTNTVAQESEIAPTSQLETGAGFALSVSSVTLCSSVLASLVAFMMQ 180 MA FG + A+ LMAVM +GLF VTN VAQ+SEIAPT QLE G GFAL VS V +CSSVLASLVAFM+Q Sbjct: 1 MAPFGRFTAEILMAVMFVGLFCVTNIVAQDSEIAPTGQLEAGTGFALPVSKVIMCSSVLASLVAFMLQ 68
BLAST of Cc_v2.0_07376.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2PJS2|A0A0B2PJS2_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_004297 PE=4 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.341e-22 Identity = 49/68 (72.06%), Postives = 55/68 (80.88%), Query Frame = 0 Query: 113 MATFGGYGAQFLMAVMVMGLFYVTNTVAQESEIAPTSQLETGAGFALSVSSVTLCSSVLASLVAFMMQ 180 MA FG + A+ LMAVM +GLF VTN VAQ+SEIAPT QLE G GFAL VS V +CSSVLASLVAFM+Q Sbjct: 1 MAPFGRFTAEILMAVMFVGLFCVTNIVAQDSEIAPTGQLEAGTGFALPVSKVIMCSSVLASLVAFMLQ 68
BLAST of Cc_v2.0_07376.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2QXS0|A0A0B2QXS0_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_029299 PE=4 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.972e-21 Identity = 50/68 (73.53%), Postives = 54/68 (79.41%), Query Frame = 0 Query: 113 MATFGGYGAQFLMAVMVMGLFYVTNTVAQESEIAPTSQLETGAGFALSVSSVTLCSSVLASLVAFMMQ 180 MA G A F +A MV+ FYVT TVAQ SEIAPTSQ+ETGAGFALSVS VTLCSSVL S+VAFMMQ Sbjct: 1 MAKLGDCAAHFFIAAMVLSTFYVTKTVAQ-SEIAPTSQMETGAGFALSVSGVTLCSSVLVSIVAFMMQ 67
BLAST of Cc_v2.0_07376.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1N936|I1N936_SOYBN (PGG domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_19G142700 PE=4 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.972e-21 Identity = 50/68 (73.53%), Postives = 54/68 (79.41%), Query Frame = 0 Query: 113 MATFGGYGAQFLMAVMVMGLFYVTNTVAQESEIAPTSQLETGAGFALSVSSVTLCSSVLASLVAFMMQ 180 MA G A F +A MV+ FYVT TVAQ SEIAPTSQ+ETGAGFALSVS VTLCSSVL S+VAFMMQ Sbjct: 1 MAKLGDCAAHFFIAAMVLSTFYVTKTVAQ-SEIAPTSQMETGAGFALSVSGVTLCSSVLVSIVAFMMQ 67
BLAST of Cc_v2.0_07376.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6M7U4|A0A4D6M7U4_VIGUN (Arabinogalactan peptide OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g2169 PE=4 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.924e-21 Identity = 48/68 (70.59%), Postives = 56/68 (82.35%), Query Frame = 0 Query: 113 MATFGGYGAQFLMAVMVMGLFYVTNTVAQESEIAPTSQLETGAGFALSVSSVTLCSSVLASLVAFMMQ 180 MA GG+ A F +AVM + +FYVT +VAQ+S IAPTSQ+ETGAG ALSVS VTL SSVLAS+VAFMMQ Sbjct: 1 MAKLGGFEAHFCIAVMTLCMFYVTKSVAQDSAIAPTSQMETGAGSALSVSEVTLYSSVLASVVAFMMQ 68 The following BLAST results are available for this feature:
BLAST of Cc_v2.0_07376.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Cc_v2.0_07376.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot ) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Cc_v2.0_07376.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11) Total hits: 0 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCajCajn.Asha.2.0.Cc_v2.0_07376.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07376.1; Name=Cc_v2.0_07376.1; organism=Cajanus cajan; type=mRNA; length=543bpback to top protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_07376.1 >drCajCajn.Asha.2.0.Cc_v2.0_07376.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07376.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_07376.1; organism=Cajanus cajan; type=polypeptide; length=180bpback to top mRNA from alignment at CcLG03_v2.0:39901584..39905577- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>drCajCajn.Asha.2.0.Cc_v2.0_07376.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07376.1; Name=Cc_v2.0_07376.1; organism=Cajanus cajan; type=mRNA; length=3994bp; location=Sequence derived from: CcLG03_v2.0:39901584..39905577- (Cajanus cajanback to top Coding sequence (CDS) from alignment at CcLG03_v2.0:39901584..39905577- >drCajCajn.Asha.2.0.Cc_v2.0_07376.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07376.1; Name=Cc_v2.0_07376.1; organism=Cajanus cajan; type=CDS; length=543bp; location=Sequence derived from: CcLG03_v2.0:39901584..39905577- (Cajanus cajanback to top |