Va04G052040.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Va04G052040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UFF2|A0A0L9UFF2_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g163600 PE=4 SV=1) HSP 1 Score: 543.117 bits (1398), Expect = 0.000e+0 Identity = 271/275 (98.55%), Postives = 273/275 (99.27%), Query Frame = 0 Query: 1 FSRSEFESTIEPHLCITVPPSPLDVLELLSILQKCVGLKDGGIDVTTSIVDGASPRHEKRHRRKRRRCQSCSDLGFAEISSNDDSGENSLDISDHEEKVEEVDTVVNDHNSSNILIESGTWKWKRLEMTHQQKSRPAPLLSRARARDSLEKSRPGARLSGKIESGRASTEIWTSVLFSGLDERPKSWTRTLLSHWTSVLLTLWTSVLYCLAGRASSSAWLDERPLLGRAFTSAGTIVLSKRPGRTSSSHVIWTSVLFKTSRTSVLFCSRTSVLFR 275 +R +FESTIEPHLCITVPPSPLDVLELLSILQKCVGLKDGGIDVTTSIVDGASPRHEKRHRRKRRRCQSCSDLGFAEISSNDDSGENSLDISDHEEKVEEVDTVVNDHNSSNILIESGTWKWKRLEMTHQQKSRPAPLLSRARARDSLEKSRPGARLSGKIESGRASTEIWTSVLFSGLDERPKSWTRTLLSHWTSVLLTLWTSVLYCLAGRASSSAWLDERPLLGRAFTSAGTIVLSKRPGRTSSSHVIWTSVLFKTSRTSVLFCSRTSVLFR Sbjct: 6 LNRGKFESTIEPHLCITVPPSPLDVLELLSILQKCVGLKDGGIDVTTSIVDGASPRHEKRHRRKRRRCQSCSDLGFAEISSNDDSGENSLDISDHEEKVEEVDTVVNDHNSSNILIESGTWKWKRLEMTHQQKSRPAPLLSRARARDSLEKSRPGARLSGKIESGRASTEIWTSVLFSGLDERPKSWTRTLLSHWTSVLLTLWTSVLYCLAGRASSSAWLDERPLLGRAFTSAGTIVLSKRPGRTSSSHVIWTSVLFKTSRTSVLFCSRTSVLFR 280
BLAST of Va04G052040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UYB1|A0A0L9UYB1_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g127100 PE=4 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.381e-18 Identity = 51/68 (75.00%), Postives = 51/68 (75.00%), Query Frame = 0 Query: 2 SRSEFESTIE--PHLCITVPPSPLDVLELLSILQKCVGLKDGGIDVTTSIVDGASPRHEKRHRRKRRR 67 SRSEFESTI H ITVPPSPLDVLELLSILQKCVGLKDGGIDVT SIVDGAS R RR Sbjct: 205 SRSEFESTIGIVSHSSITVPPSPLDVLELLSILQKCVGLKDGGIDVTASIVDGASLRRLPVQASAYRR 272
BLAST of Va04G052040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6LVY1|A0A4D6LVY1_VIGUN (DNA-binding protein RHL1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG5g574 PE=4 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.113e-12 Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 0 Query: 76 FAEISSNDDSGENSLDISDHEEKVEEVDTVVNDHNSSNILIES 118 FAEISS DDSGENS D+SDHEEKVEEVDT VN+HNSSNILI+S Sbjct: 248 FAEISSGDDSGENSPDLSDHEEKVEEVDTAVNNHNSSNILIQS 290
BLAST of Va04G052040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3TBL8|A0A0S3TBL8_PHAAN (DNA-binding protein RHL1 OS=Vigna angularis var. angularis OX=157739 GN=Vigan.11G212700 PE=4 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.948e-10 Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 0 Query: 76 FAEISSNDDSGENSLDISDHEEKVEEVDTVVNDHNSS 112 FAEIS++DDSGENS DISDHEEKVEEVDT VNDHNSS Sbjct: 246 FAEISASDDSGENSPDISDHEEKVEEVDTAVNDHNSS 282
BLAST of Va04G052040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0JWM7|A0A8T0JWM7_PHAAN (DNA-binding protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0121100 PE=4 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.181e-10 Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 0 Query: 76 FAEISSNDDSGENSLDISDHEEKVEEVDTVVNDHNSS 112 FAEIS++DDSGENS DISDHEEKVEEVDT VNDHNSS Sbjct: 246 FAEISASDDSGENSPDISDHEEKVEEVDTAVNDHNSS 282
BLAST of Va04G052040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TXS9|A0A1S3TXS9_VIGRR (DNA-binding protein RHL1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106759730 PE=4 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.677e-10 Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 0 Query: 76 FAEISSNDDSGENSLDISDHEEKVEEVDTVVNDHNSS 112 FAE+SS+DDSGENS DISDHEEKVEEVDT VNDHNSS Sbjct: 246 FAEVSSSDDSGENSPDISDHEEKVEEVDTAVNDHNSS 282
BLAST of Va04G052040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151TWT0|A0A151TWT0_CAJCA (DNA-binding protein RHL1 OS=Cajanus cajan OX=3821 GN=KK1_010673 PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.040e-9 Identity = 40/78 (51.28%), Postives = 46/78 (58.97%), Query Frame = 0 Query: 41 GGIDVTTSIVDGASP---RHEKRHRRKRRRCQSCSDLGFAEISSNDDSGENSLDISDHEEKVEEVDTVVNDHNSSNIL 115 GG D ++ D RH R RK + FAEISS DDSGENS D+S+HEEK EVD VNDHN+SNIL Sbjct: 185 GGADSEVNLEDTKESVPVRHSARTARKSYK--------FAEISSGDDSGENSPDLSEHEEKAAEVDNSVNDHNNSNIL 254
BLAST of Va04G052040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0KJB7|A0A8T0KJB7_PHAAN (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit KCP2 OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0103410 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.025e-8 Identity = 66/161 (40.99%), Postives = 81/161 (50.31%), Query Frame = 0 Query: 133 KSRPAPLLSRARARDSLEKSRPGARLSGKIESGRASTEIWTSVLFS------GLDERPKSWTRTLLSHWTSVLLTLWTSVLYCLAGRASSSAWLDERPLLGRAFTSAG---------TIVLSKRP--GRTSSSHVIWTSVLF--KTSRTSVLFCSRTSVLF 274 K P LS A R++L K ++ K+ GR S V + L ERP SWT LL+ TSVL +WTSVL CLAG AS+SAWLDERPL G S+G +L +RP GR SS WTSVL + + + C TSVL Sbjct: 358 KVAPGRPLSVAPEREALAK----IQIWRKVAPGRPSVFAPERVPLAFGRTSFNLAERPLSWTSVLLAG-TSVLSAIWTSVL-CLAGLASTSAWLDERPLTGTNVLSSGRASSSLDERPPLLDERPLLGRASS----WTSVLLDERPPAWTNVHCPGTSVLL 508 The following BLAST results are available for this feature:
BLAST of Va04G052040.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL) Total hits: 8 Position : 0 Zoom : x 1
BLAST of Va04G052040.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Va04G052040.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11) Total hits: 0 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Va04G052040.1_Jingnong6 ID=Va04G052040.1_Jingnong6; Name=Va04G052040.1; organism=Vigna angularis; type=mRNA; length=828bpback to top protein sequence of Va04G052040.1_Jingnong6 >Va04G052040.1_Jingnong6 ID=Va04G052040.1_Jingnong6; Name=Va04G052040.1_Jingnong6; organism=Vigna angularis; type=polypeptide; length=275bpback to top mRNA from alignment at Chr4:32553712..32556924- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Va04G052040.1_Jingnong6 ID=Va04G052040.1_Jingnong6; Name=Va04G052040.1; organism=Vigna angularis; type=mRNA; length=3213bp; location=Sequence derived from: Chr4:32553712..32556924- (Vigna angularisback to top Coding sequence (CDS) from alignment at Chr4:32553712..32556924- >Va04G052040.1_Jingnong6 ID=Va04G052040.1_Jingnong6; Name=Va04G052040.1; organism=Vigna angularis; type=CDS; length=828bp; location=Sequence derived from: Chr4:32553712..32556924- (Vigna angularisback to top |