Va07G066340.1

Transcript Overview


Name	Va07G066340.1
Unique Name	Va07G066340.1_Jingnong6
Type	mRNA
Organism	Vigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length	1110

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr7	chromosome	Chr7:39183833..39187072 -	Vigna angularis cv. Jingnong6 genome v1.7.1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna angularis cv. Jingnong6 genome v1.7.1	2024-05-08
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL	2024-05-23
InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1	2024-05-23
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot	2024-05-23
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11	2024-05-23

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
avjavjL287	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anavjL0137	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anavjL0366	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anavjL0421	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjcaR733	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
avjcaR747	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
avjccR1200	Cajanus cajan Asha genome v1.0	Cajanus cajan
avjcaR782	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
anavjL0829	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjccR1266	Cajanus cajan Asha genome v1.0	Cajanus cajan
anavjL0840	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjpsR783	Pisum sativum Cameor genome v1a	Pisum sativum
avjvfhR810	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
avjvfhR818	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
avjvssR845	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvssR885	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvssR900	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvumR621	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjvumR631	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjvasR608	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvasR617	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjpvfR778	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
avjpvfR829	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Orthologs


Gene/Transcript	Assembly	Species
Vum_03G01797.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Vigan.03G256700.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Va07G066340	Va07G066340_Jingnong6	Vigna angularis	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va07G066340.1:three_prime_UTR_1_Jingnong6	Va07G066340.1:three_prime_UTR_1_Jingnong6	Vigna angularis	three_prime_UTR
Va07G066340.1:three_prime_UTR_2_Jingnong6	Va07G066340.1:three_prime_UTR_2_Jingnong6	Vigna angularis	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va07G066340.1:exon_1_Jingnong6	Va07G066340.1:exon_1_Jingnong6	Vigna angularis	exon
Va07G066340.1:exon_2_Jingnong6	Va07G066340.1:exon_2_Jingnong6	Vigna angularis	exon
Va07G066340.1:exon_3_Jingnong6	Va07G066340.1:exon_3_Jingnong6	Vigna angularis	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va07G066340.1_Jingnong6-cds	Va07G066340.1_Jingnong6-cds-Chr7_Jingnong6:39184975..39185856	Vigna angularis	CDS
Va07G066340.1_Jingnong6-cds	Va07G066340.1_Jingnong6-cds-Chr7_Jingnong6:39186737..39186964	Vigna angularis	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va07G066340.1:five_prime_UTR_1_Jingnong6	Va07G066340.1:five_prime_UTR_1_Jingnong6	Vigna angularis	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Va07G066340.1_Jingnong6	Va07G066340.1_Jingnong6	Vigna angularis	polypeptide
Va07G066340.1_Jingnong6	Va07G066340.1_Jingnong6-protein	Vigna angularis	polypeptide

Homology

[Close]

BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RPR0|A0A0S3RPR0_PHAAN (CCHC-type domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G256700 PE=4 SV=1)

HSP 1 Score: 761.911 bits (1966), Expect = 0.000e+0
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0

Query:    1 MTRASIDLFSQKTKAKRRRSTCERETQKEALALATTVRRRRRGVLPPRHHLLQTINTHFPLLGTLKFGDLKLLIFQLCLIFHIIKGLVFFFLGNLGLEKLWEFSSKVAGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKNNN 369
            MTRASIDLFSQKTKAKRRRSTCERETQKEALALATTVRRRRRGVLPPRHHLLQTINTHFPLLGTLKFGDLKLLIFQLCLIFHIIKGLVFFFLGNLGLEKLWEFSSKVAGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKNNN
Sbjct:    1 MTRASIDLFSQKTKAKRRRSTCERETQKEALALATTVRRRRRGVLPPRHHLLQTINTHFPLLGTLKFGDLKLLIFQLCLIFHIIKGLVFFFLGNLGLEKLWEFSSKVAGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKNNN 369

[Close]

BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0K2B7|A0A8T0K2B7_PHAAN (CCHC-type domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0223410 PE=4 SV=1)

HSP 1 Score: 761.911 bits (1966), Expect = 0.000e+0
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0

Query:    1 MTRASIDLFSQKTKAKRRRSTCERETQKEALALATTVRRRRRGVLPPRHHLLQTINTHFPLLGTLKFGDLKLLIFQLCLIFHIIKGLVFFFLGNLGLEKLWEFSSKVAGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKNNN 369
            MTRASIDLFSQKTKAKRRRSTCERETQKEALALATTVRRRRRGVLPPRHHLLQTINTHFPLLGTLKFGDLKLLIFQLCLIFHIIKGLVFFFLGNLGLEKLWEFSSKVAGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKNNN
Sbjct:    1 MTRASIDLFSQKTKAKRRRSTCERETQKEALALATTVRRRRRGVLPPRHHLLQTINTHFPLLGTLKFGDLKLLIFQLCLIFHIIKGLVFFFLGNLGLEKLWEFSSKVAGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKNNN 369

[Close]

BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151RTE7|A0A151RTE7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_032664 PE=4 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 2.579e-121
Identity = 184/259 (71.04%), Postives = 212/259 (81.85%), Query Frame = 0

Query:  111 MALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKNNN 369
            MALEEGKVKIEKFDG DFGFWKMQIEDYLYQKKLY PL GEKP+DM+Q +W LLDRQALGVIRLTLAKNVA NI+N+KTTA LM+ LS+MYEKPS ANKV+++RRL NLKM EGN V +HI+ FNTI+A L S+QI F+DE+KAL+LLSSLPESW ATVT  S+ A ++KLK ++I DLILSEDV RR   E S S S SAL+ E+RGR +QKG N  RGRSKSR + Q K RNDI CWNC K GHF NQC+A +KN N
Sbjct:    1 MALEEGKVKIEKFDGKDFGFWKMQIEDYLYQKKLYQPLIGEKPDDMKQEEWNLLDRQALGVIRLTLAKNVAFNIVNEKTTASLMKTLSDMYEKPSAANKVHIMRRLFNLKMGEGNLVINHINDFNTILAMLESVQIKFEDEVKALILLSSLPESWAATVTAVSSSARDNKLKLNDIRDLILSEDVRRRDSEEPSSSTSSSALNTESRGRTTQKGYNS-RGRSKSRAKGQPKFRNDIVCWNCDKRGHFTNQCKAPKKNKN 258

[Close]

BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151QVU7|A0A151QVU7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_044546 PE=4 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 1.885e-120
Identity = 184/259 (71.04%), Postives = 212/259 (81.85%), Query Frame = 0

Query:  111 MALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKNNN 369
            MALEEGKVKIEKFDG DFGFWKMQIEDYLYQKKLY PL GEKP+DM+Q +W LLDRQALGVIRLTLAKNVA NI+N+KTTA LM+ LS+MYEKPS ANKV+++RRL NLKM EGN V +HI+ FNTI+A L S+QI F+DE+KAL+LLSSLPESW ATVT  S+ A ++KLK ++I DLILSEDV RR   E S S S SAL+ E+RGR +QKG N  RGRSKSR + Q K RNDI CWNC K GHF NQC+A +KN N
Sbjct:    1 MALEEGKVKIEKFDGKDFGFWKMQIEDYLYQKKLYQPLIGEKPDDMKQEEWNLLDRQALGVIRLTLAKNVAFNIVNEKTTASLMKTLSDMYEKPSAANKVHIMRRLFNLKMGEGNLVINHINDFNTILAMLESVQIKFEDEVKALILLSSLPESWAATVTAVSSSARDNKLKLNDIRDLILSEDVRRRDSEEPSSSTSSSALNTESRGRTTQKGYNS-RGRSKSRAKGQPKFRNDIVCWNCDKRGHFTNQCKAPKKNKN 258

[Close]

BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4Y1RMK2|A0A4Y1RMK2_PRUDU (CCHC-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_016848 PE=4 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 2.993e-102
Identity = 156/267 (58.43%), Postives = 198/267 (74.16%), Query Frame = 0

Query:  111 MALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQG----RGRSKSRRRSQTKVRND-----ITCWNCQKNGHFKNQCRASRKNN 368
            MA +EGK+KIEKFDG+DFGFWKMQIEDYLYQKKLY PL   KP  M   DW LLDRQALGVIRLTL++NVA NI  +KTTA LM ALS+MYEKPS +NKV+L+RRL NL+M EG SV  H+++ NT+  QL+S+ I FD+E++AL+LLSSLPESW ATVT  S+ + ++KL FD++ DL+LSE++ RR   ES  S++ S L  E+RGRNS +G  +G    RGRSK RR       N      + CWNC K GH+KNQC+++ K++
Sbjct:    1 MAADEGKMKIEKFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDWTLLDRQALGVIRLTLSRNVAFNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTVTTQLSSVGIEFDEEVRALILLSSLPESWNATVTAVSSSSGSNKLTFDDVRDLVLSEEIRRR---ESGESSTSSVLHTESRGRNSTRGNGRGRSNYRGRSKDRRSKSRNPNNSHSSKTVECWNCGKIGHYKNQCKSASKDH 264

[Close]

BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4Y1RCM7|A0A4Y1RCM7_PRUDU (CCHC-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_012406 PE=4 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 6.408e-102
Identity = 156/267 (58.43%), Postives = 198/267 (74.16%), Query Frame = 0

Query:  111 MALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQG----RGRSKSRRRSQTKVRND-----ITCWNCQKNGHFKNQCRASRKNN 368
            MA +EGK+KIEKFDG+DFGFWKMQIEDYLYQKKLY PL   KP  M   DW LLDRQALGVIRLTL++NVA NI  +KTTA LM ALS+MYEKPS +NKV+L+RRL NL+M EG SV  H+++ NT+  QL+S+ I FD+E++AL+LLSSLPESW ATVT  S+ + ++KL FD++ DL+LSE++ RR   ES  S++ S L  E+RGRNS +G  +G    RGRSK RR       N      + CWNC K GH+KNQC+++ K++
Sbjct:    1 MAADEGKMKIEKFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDWTLLDRQALGVIRLTLSRNVAFNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTVTTQLSSVGIEFDEEVRALILLSSLPESWNATVTAVSSSSGSNKLTFDDVRDLVLSEEIRRR---ESGESSTSSVLHTESRGRNSTRGNGRGRSNYRGRSKDRRSKSRNPNNSHSSKTVECWNCGKIGHYKNQCKSASKDH 264

[Close]

BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4Y1R3K4|A0A4Y1R3K4_PRUDU (CCHC-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_008085 PE=4 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 5.822e-101
Identity = 156/267 (58.43%), Postives = 198/267 (74.16%), Query Frame = 0

Query:  111 MALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQG----RGRSKSRRRSQTKVRND-----ITCWNCQKNGHFKNQCRASRKNN 368
            MA +EGK+KIEKFDG+DFGFWKMQIEDYLYQKKLY PL   KP  M   DW LLDRQALGVIRLTL++NVA NI  +KTTA LM ALS+MYEKPS +NKV+L+RRL NL+M EG SV  H+++ NT+  QL+S+ I FD+E++AL+LLSSLPESW ATVT  S+ + ++KL FD++ DL+LSE++ RR   ES  S++ S L  E+RGRNS +G  +G    RGRSK RR       N      + CWNC K GH+KNQC+++ K++
Sbjct:    1 MAADEGKMKIEKFDGADFGFWKMQIEDYLYQKKLYQPLSENKPEGMNDEDWTLLDRQALGVIRLTLSRNVAFNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTVTTQLSSVGIEFDEEVRALILLSSLPESWNATVTAVSSSSGSNKLTFDDVRDLVLSEEIRRR---ESGESSTSSVLHTESRGRNSTRGNGRGRSNYRGRSKDRRSKSRNPNNSHSSKTVECWNCGKIGHYKNQCKSASKDH 264

[Close]

BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A3CMG8|A0A6A3CMG8_HIBSY (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00004205pilonHSYRG00041 PE=4 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 2.059e-100
Identity = 160/258 (62.02%), Postives = 200/258 (77.52%), Query Frame = 0

Query:  110 AMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKN 367
            AMA +EGKVKIEKFDG+DFGFWKMQIED+LYQK LY PL G++P  M+  DW LLDRQALGVIRLTL++NVA NI  +KTTA LM ALS+MYEKPS +NKV+L+RRL NL+M EG SV  H+++ NTI  QL+S++I FDDE++AL+LLSSLP+SW ATVT  S+ + NSKLKFD++ DL+LSE++ RR   ES  +++ SAL  E+RGR S++  N  RGRSKSRR        D TC+NC K GHFK  CRA +K+
Sbjct:   14 AMAADEGKVKIEKFDGADFGFWKMQIEDFLYQKNLYQPLSGKQPEGMKNEDWALLDRQALGVIRLTLSRNVAFNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTITTQLSSVEIEFDDEVRALILLSSLPDSWNATVTAVSSSSGNSKLKFDDVRDLVLSEEIRRR---ESGEASTSSALHTESRGRTSERNSN--RGRSKSRRGKSRTGNKDFTCYNCGKKGHFKRDCRALKKD 266

[Close]

BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A2WXJ4|A0A6A2WXJ4_HIBSY (F-box family protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116958pilonHSYRG00301 PE=4 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 9.508e-100
Identity = 162/260 (62.31%), Postives = 201/260 (77.31%), Query Frame = 0

Query:  108 AGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKN 367
             GAMA +EGKVKIEKFDG+DFGFWKMQIED+LYQK LY PL G++P  M+  DW LLDRQALGVIRLTL++NVA NI  +KTTA LM ALS+MYEKPS +NKV+L+RRL NL+M EG SV  H+++ NTI  QL+S++I FDDE++AL+LLSSLP+SW ATVT  S+ + NSKLKFD++ DL+LSE++ RR   ES  +++ SAL  E+RGR S++  N  RGRSKSRR        D TC+NC K GHFK  CRA +KN
Sbjct:  474 VGAMAADEGKVKIEKFDGADFGFWKMQIEDFLYQKNLYQPLSGKQPEGMKDEDWALLDRQALGVIRLTLSRNVAFNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMAEGASVAQHLNELNTITTQLSSVEIEFDDEVRALILLSSLPDSWNATVTAVSSSSGNSKLKFDDVRDLVLSEEIRRR---ESGEASTSSALHTESRGRTSER--NSNRGRSKSRRGKSRTGNKDFTCYNCGKKGHFKRDCRAPKKN 728

[Close]

BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A2ZX47|A0A6A2ZX47_HIBSY (RING-type E3 ubiquitin transferase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110683pilonHSYRG00417 PE=4 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 8.407e-99
Identity = 162/260 (62.31%), Postives = 199/260 (76.54%), Query Frame = 0

Query:  108 AGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKN 367
             GAMA +EGKVKIEKFDG+DFGFWKMQIED+LYQK LY PL G++P  M+  DW LLDRQALGVIRLTL++NVA NI  +KTT  LM ALS+MYEKPS +NKV+L+RRL NL+M +G SV  H++K NTI  QL+SM+I FDDE++AL+LLSSLP+SW ATVT  ++ + NSKLKFD++ DL+LSE++ RR   E+S S   SAL  E+RGR S++  N  RGRSKSRR          TC+NC K GHFK  CRAS+KN
Sbjct:  321 VGAMAADEGKVKIEKFDGADFGFWKMQIEDFLYQKNLYQPLSGKQPEGMKNEDWALLDRQALGVIRLTLSRNVAFNIAKEKTTVGLMAALSSMYEKPSTSNKVHLMRRLFNLRMAKGASVAQHLNKLNTITTQLSSMEIEFDDEVRALILLSSLPDSWNATVTAVNSSSGNSKLKFDDVRDLVLSEEIRRREAGEASTS---SALHTESRGRTSER--NSNRGRSKSRRGKSRTCNKGFTCYNCGKKGHFKRDCRASKKN 575

[Close]

BLAST of Va07G066340.1 vs. UniProtKB/Swiss-Prot
Match: Retrovirus-related (Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.931e-38
Identity = 93/256 (36.33%), Postives = 147/256 (57.42%), Query Frame = 0

Query:  117 KVKIEKFDGSD-FGFWKMQIEDYLYQKKLY--LPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSLMESSRSNSGSALSVENRGRNSQKGCNQ-GR--GRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRK 366
            K ++ KF+G + F  W+ ++ D L Q+ L+  L +  +KP+ M+  DW  LD +A   IRL L+ +V  NI+++ T   +   L ++Y   +L NK+YL ++L  L M EG +   H++ FN +I QLA++ +  ++E KA+LLL+SLP S+    T   +  +  +LK D    L+L+E + ++        N G AL  E RGR+ Q+  N  GR   R KS+ RS+++VRN   C+NC + GHFK  C   RK
Sbjct:    5 KYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELK-DVTSALLLNEKMRKKP------ENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRN---CYNCNQPGHFKRDCPNPRK 250

[Close]

BLAST of Va07G066340.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:11612357-11612686 REVERSE LENGTH=109)

HSP 1 Score: 93.9745 bits (232), Expect = 2.371e-23
Identity = 46/90 (51.11%), Postives = 64/90 (71.11%), Query Frame = 0

Query:  121 EKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNMYEKPSLANKV 210
            +K DG+ + F +M+IEDYLY KKL+ PL G+K   M Q DW +L RQ L VIRLT++KN+A N+  +K+   LM+ LS++Y+KPS  N V
Sbjct:    7 DKVDGTSYSFCRMKIEDYLYGKKLHQPL-GKKVETMSQDDWNILYRQVLDVIRLTISKNIAHNVAKEKSPDGLMKVLSDIYKKPSTNNTV 95

[Close]

BLAST of Va07G066340.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:422732-424580 REVERSE LENGTH=488)

HSP 1 Score: 52.373 bits (124), Expect = 3.611e-7
Identity = 59/277 (21.30%), Postives = 99/277 (35.74%), Query Frame = 0

Query:  118 VKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRGEKPN-----DMEQSDWELLDRQALGVIRLTLAKNVALNIMNK-------------KTTADLMQALSNMYEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDDEIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSED---------VHRRSLMESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWNCQKNGHFKNQCRASRKN 367
            +KI +FDG  + +W  Q+E +L Q KL   L    P+       E +  E+    A G   L        ++MN              K   +L   L  +Y+     +K   +R+ +  +M E   +   +  FN I   + S  +  D+      ++S  P SW    T          L    +++ + +E+         V  R    SS+     +L   +RG  S             R+  +   R  I C NC + GH    C  S+ +
Sbjct:  193 IKISRFDGKSYLYWASQMELFLKQLKLTYVLSEPCPSIGSSQGPETNPREITRADATGKKWLRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQCDESKSKRSQVRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFPPSWRGFCT---RLMEEEYLPVWMLMERVKAEEELLRNGAKGVTYRPATGSSQMERTPSLGTTHRGSQSV---------GWKRKEPERDERVIIVCDNCGRKGHLAKHCWGSKSD 457

The following BLAST results are available for this feature:

BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
BLAST of Va07G066340.1 vs. UniProtKB/Swiss-Prot
BLAST of Va07G066340.1 vs. Araport11

BLAST of Va07G066340.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
tr\|A0A0S3RPR0\|A0A0S3RPR0_PHAAN	0.000e+0	100.00	CCHC-type domain-containing protein OS=Vigna angul...	[more]
tr\|A0A8T0K2B7\|A0A8T0K2B7_PHAAN	0.000e+0	100.00	CCHC-type domain-containing protein OS=Phaseolus a...	[more]
tr\|A0A151RTE7\|A0A151RTE7_CAJCA	2.579e-121	71.04	Retrovirus-related Pol polyprotein from transposon...	[more]
tr\|A0A151QVU7\|A0A151QVU7_CAJCA	1.885e-120	71.04	Retrovirus-related Pol polyprotein from transposon...	[more]
tr\|A0A4Y1RMK2\|A0A4Y1RMK2_PRUDU	2.993e-102	58.43	CCHC-type domain-containing protein OS=Prunus dulc...	[more]
tr\|A0A4Y1RCM7\|A0A4Y1RCM7_PRUDU	6.408e-102	58.43	CCHC-type domain-containing protein OS=Prunus dulc...	[more]
tr\|A0A4Y1R3K4\|A0A4Y1R3K4_PRUDU	5.822e-101	58.43	CCHC-type domain-containing protein OS=Prunus dulc...	[more]
tr\|A0A6A3CMG8\|A0A6A3CMG8_HIBSY	2.059e-100	62.02	CCHC-type domain-containing protein OS=Hibiscus sy...	[more]
tr\|A0A6A2WXJ4\|A0A6A2WXJ4_HIBSY	9.508e-100	62.31	F-box family protein OS=Hibiscus syriacus OX=10633...	[more]
tr\|A0A6A2ZX47\|A0A6A2ZX47_HIBSY	8.407e-99	62.31	RING-type E3 ubiquitin transferase OS=Hibiscus syr...	[more]

BLAST of Va07G066340.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
Retrovirus-related	4.931e-38	36.33	Pol polyprotein from transposon TNT 1-94 OS=Nicoti...	[more]

BLAST of Va07G066340.1 vs. Araport11
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11)
Total hits: 2

Position :

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Match Name	E-value	Identity	Description
\|	2.371e-23	51.11	Symbols: no symbol available \| no full name availa...	[more]
\|	3.611e-7	21.30	Symbols: no symbol available \| no full name availa...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1
Date Performed: 2024-05-23

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 346..362 e-value: 0.85 score: 21.0
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 348..362 score: 9.092303
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 161..298 e-value: 2.4E-24 score: 97.1
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 161..360
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 343..367

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr7:39183833..39187072-
coding sequence from alignment at Chr7:39183833..39187072-

mRNA sequence

>Va07G066340.1_Jingnong6 ID=Va07G066340.1_Jingnong6; Name=Va07G066340.1; organism=Vigna angularis; type=mRNA; length=1110bp
ATGACCCGGGCCAGTATAGATTTGTTTTCTCAGAAAACCAAAGCAAAACG
ACGACGCTCTACCTGTGAGAGAGAGACACAGAAGGAAGCCCTTGCTCTAG
CCACCACTGTAAGGCGACGTCGTAGGGGTGTCTTGCCGCCGCGCCACCAT
CTTCTTCAAACTATAAACACTCACTTTCCCTTACTTGGAACCCTTAAATT
TGGAGACCTAAAACTTCTCATTTTTCAGCTTTGTCTGATCTTCCACATCA
TAAAAGGTTTGGTTTTCTTTTTTCTTGGGAATCTTGGTTTAGAGAAGTTG
TGGGAGTTTTCTTCAAAAGTAGCGGGAGCAATGGCATTGGAAGAAGGTAA
GGTGAAGATTGAGAAATTTGATGGGAGTGACTTTGGGTTTTGGAAGATGC
AGATAGAAGACTACCTTTATCAGAAGAAGTTGTATCTACCCTTAAGAGGA
GAGAAGCCAAATGACATGGAACAGTCAGATTGGGAGTTATTAGATCGGCA
GGCCCTTGGTGTGATTCGGCTGACATTAGCCAAGAATGTTGCGTTAAACA
TCATGAACAAGAAAACAACTGCAGATTTGATGCAAGCGTTATCAAATATG
TATGAGAAGCCCTCTCTAGCCAATAAAGTGTATTTGATTCGCAGACTTGT
CAACCTTAAAATGGATGAAGGTAACTCTGTTACTCATCATATTAGTAAAT
TTAATACAATTATTGCACAGTTGGCATCAATGCAAATAACTTTTGATGAT
GAAATAAAAGCATTACTTTTATTATCGTCTCTTCCGGAAAGTTGGGGTGC
TACTGTTACTATAGGTAGTAATTTTGCAAGCAATAGCAAGTTGAAGTTTG
ATAACATCCTTGACTTGATCTTAAGCGAAGATGTTCACAGGAGAAGTTTA
ATGGAATCTTCCCGTTCTAATTCTGGTTCAGCATTGAGTGTTGAGAATAG
AGGAAGAAATAGCCAGAAAGGTTGTAATCAAGGCCGAGGCAGATCAAAGT
CTAGAAGGAGATCACAAACAAAAGTACGAAATGATATCACCTGTTGGAAT
TGTCAGAAAAATGGTCACTTTAAAAATCAATGTCGTGCTTCAAGGAAGAA
CAACAACTAA

protein sequence of Va07G066340.1_Jingnong6

>Va07G066340.1_Jingnong6 ID=Va07G066340.1_Jingnong6; Name=Va07G066340.1_Jingnong6; organism=Vigna angularis; type=polypeptide; length=369bp
MTRASIDLFSQKTKAKRRRSTCERETQKEALALATTVRRRRRGVLPPRHH
LLQTINTHFPLLGTLKFGDLKLLIFQLCLIFHIIKGLVFFFLGNLGLEKL
WEFSSKVAGAMALEEGKVKIEKFDGSDFGFWKMQIEDYLYQKKLYLPLRG
EKPNDMEQSDWELLDRQALGVIRLTLAKNVALNIMNKKTTADLMQALSNM
YEKPSLANKVYLIRRLVNLKMDEGNSVTHHISKFNTIIAQLASMQITFDD
EIKALLLLSSLPESWGATVTIGSNFASNSKLKFDNILDLILSEDVHRRSL
MESSRSNSGSALSVENRGRNSQKGCNQGRGRSKSRRRSQTKVRNDITCWN
CQKNGHFKNQCRASRKNNN

mRNA from alignment at Chr7:39183833..39187072-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Va07G066340.1_Jingnong6 ID=Va07G066340.1_Jingnong6; Name=Va07G066340.1; organism=Vigna angularis; type=mRNA; length=3240bp; location=Sequence derived from: Chr7:39183833..39187072- (Vigna angularis
GAAAATTTGAAATGCAAAACGTAGTGAAACTTGCAGTGATGAAAATGGGC
TGGGAAATGTTTGCAACCTTATGACCCGAACCGGTCAGACTTGACCCGGC
GAGTTTCAATGACCCGGGCCAGTATAGATTTGTTTTCTCAGAAAACCAAA
GCAAAACGACGACGCTCTACCTGTGAGAGAGAGACACAGAAGGAAGCCCT
TGCTCTAGCCACCACTGTAAGGCGACGTCGTAGGGGTGTCTTGCCGCCGC
GCCACCATCTTCTTCAAACTATAAACACTCACTTTCCCTTACTTGGAACC
CTTAAATTTGGAGACCTAAAACTTCTCATTTTTCAGGTAAGGTAAGCCCT
CCGTTGCTTTTTCATATTCTGCATACCTCATTCTTGTCATATTTTAGATT
TCACGAGCAAACAAACAAACTATATCCCTGTTTAAGTGGCGATTAATGTT
AATTCTCGTGTTTAAATTGAACAGTATGAATAAATTGTAATAATTTTTCG
TTTTTTAATTCAAATTTTCAGTGTTTGCGATCACCAAAACCCCCCATGAG
GATAGAAGTTTAGGAACGTAATAATTCCGTGCCGTTAAAGCAGAATTTAA
GCAAATTTAAAAATAACAGAATCAGAATGACTTTTAAATTGGATCCAATA
ACTGGAGATTTCTTTTAAGGGTACAAGCCAAGTTAAAACATGTAGTGTTG
AAGGACAAACTTTCATATTTCAAAACGTATTATTTAAATGTATCCATAGA
TATGTTGTGTATGCGTATTATGAAGGTATATAACTGAAAACTAAAGTTTT
ATTTTGAAATTTTGTGATATAATTTCCTTGGATAGGGAAATATTTGAGAC
ATCTCTTATGGTTTAGTTAGAAATTTAGATTTCAGGTTAGCAGAAGTGAG
ATAATTTCTCTCTTTGATTTGTGTGGTGTTATATTTTTAGCTAACATCTT
GTGCAAAGCTTATATTATTAGTATTGTAGAGCTTAATTTAGTCTCACATT
GCTCAATAATGATAGATAGTGTTCTCTATATAAGCAATTTTCTATAAAGC
TTGAAAGATAGACCAAAAATATAAATATACTTATTAGTGTAATCATGAAC
GTAGGTATTTGTATGTTGAACCATGTTAAATTCTTGTGTCATTTATTTCT
CTCTTTCCTTTTTTTTGTCTTCATATGTATCAGGAGTCAGTTTCTTAGTA
TGCTCTGTGTTTGCAGCTTTGTCTGATCTTCCACATCATAAAAGGTTTGG
TTTTCTTTTTTCTTGGGAATCTTGGTTTAGAGAAGTTGTGGGAGTTTTCT
TCAAAAGTAGCGGGAGCAATGGCATTGGAAGAAGGTAAGGTGAAGATTGA
GAAATTTGATGGGAGTGACTTTGGGTTTTGGAAGATGCAGATAGAAGACT
ACCTTTATCAGAAGAAGTTGTATCTACCCTTAAGAGGAGAGAAGCCAAAT
GACATGGAACAGTCAGATTGGGAGTTATTAGATCGGCAGGCCCTTGGTGT
GATTCGGCTGACATTAGCCAAGAATGTTGCGTTAAACATCATGAACAAGA
AAACAACTGCAGATTTGATGCAAGCGTTATCAAATATGTATGAGAAGCCC
TCTCTAGCCAATAAAGTGTATTTGATTCGCAGACTTGTCAACCTTAAAAT
GGATGAAGGTAACTCTGTTACTCATCATATTAGTAAATTTAATACAATTA
TTGCACAGTTGGCATCAATGCAAATAACTTTTGATGATGAAATAAAAGCA
TTACTTTTATTATCGTCTCTTCCGGAAAGTTGGGGTGCTACTGTTACTAT
AGGTAGTAATTTTGCAAGCAATAGCAAGTTGAAGTTTGATAACATCCTTG
ACTTGATCTTAAGCGAAGATGTTCACAGGAGAAGTTTAATGGAATCTTCC
CGTTCTAATTCTGGTTCAGCATTGAGTGTTGAGAATAGAGGAAGAAATAG
CCAGAAAGGTTGTAATCAAGGCCGAGGCAGATCAAAGTCTAGAAGGAGAT
CACAAACAAAAGTACGAAATGATATCACCTGTTGGAATTGTCAGAAAAAT
GGTCACTTTAAAAATCAATGTCGTGCTTCAAGGAAGAACAACAACTAAAA
GAAGCAAAATGATAATCAATCAGCAAATGCAGCAACAACAACAGATGAAA
ATTGCAAATGCATTATTATGTAATTTAGATAGTTCCATTGACTCATGGAT
TATGGACTCAGATAAGTCATTTCATACTACACCTTTCTTAGAACTATTAT
CTAACTAGTTTCTAGAAAGTTTGGAAAGGTTTATCTTGAAGATGAAAATC
TCTTGATATTGTGGGAAGAGGTAATATTAACATGAGGTTATGTGTTTTGT
CTTTTCCTTAGCTTTACTAATCTTCTTTCCTTGAATTGCTTTTTGTATTT
TAACTTTTATTTCTTTTTGTGGCTGTTGTTCTACATGATGGACAGGTTTA
CTTTTGAATCTTGATGCTCACCTTCTTCAAGTCAAGTATTGCAAACAGTA
ACAAATAATAAAGCTGGGAGAGATTTATTAAGTTTAGGAAGAAAATAATA
CACATTATTTCTGAATGCTTTCTACTCCAAGAAACCAACTATTATGTTTT
TTTACTGTTCTCATCTAATCCTTTTCTGTTCAATTATGTTTCTTAAAATT
ATCTAATCCCACTAAATTCTAAGAACATTGGGGTTGGCTTTTCTGCACAT
TTTGCGCTGTATATTATATGGTTAATTTAATAGGACTATGGTAAATAGAA
GCATGAAGAGACTATTTATATAGCTAAATTTTTTGAAAGAGCTGAACAGG
TTTAGTGAATTCAAGAATTAAGTATTTTTGTTCGTTACATAAATATTGGC
CTTATTACATCATACAGGAGTTGAAACTTCAGACACAAGCTCAAAATACA
CTGCCAAATGGAGAAGTGAGGGTTAAATCAGAGCATTGAGTGATATGTTT
CTTGTGCTTTTGCTTGTCTATACATGGAATTCAATATTTCTGTTTCTTTT
CCTATGTTATACGTATGCATTGTATAGTGAAGTTCATCTCTGCCTCTTTT
TGTCTGCATCTTGGTTAAATGTTGTAAATTTGATGACTCATTTTTGCTTA
CTATTAGTTAATTGAATATTATTGTCGTCTTTTGAGTTTGTGTACAAGTG
CTTTAGCTCAATTTTCCATCAAGAAATTAATTAAAGTTGTTTTTATGTGT
TCATTAAAATACTTAGTAATATATGTAATACTACTTTTTT

Coding sequence (CDS) from alignment at Chr7:39183833..39187072-

>Va07G066340.1_Jingnong6 ID=Va07G066340.1_Jingnong6; Name=Va07G066340.1; organism=Vigna angularis; type=CDS; length=1110bp; location=Sequence derived from: Chr7:39183833..39187072- (Vigna angularis
ATGACCCGGGCCAGTATAGATTTGTTTTCTCAGAAAACCAAAGCAAAACG
ACGACGCTCTACCTGTGAGAGAGAGACACAGAAGGAAGCCCTTGCTCTAG
CCACCACTGTAAGGCGACGTCGTAGGGGTGTCTTGCCGCCGCGCCACCAT
CTTCTTCAAACTATAAACACTCACTTTCCCTTACTTGGAACCCTTAAATT
TGGAGACCTAAAACTTCTCATTTTTCAGCTTTGTCTGATCTTCCACATCA
TAAAAGGTTTGGTTTTCTTTTTTCTTGGGAATCTTGGTTTAGAGAAGTTG
TGGGAGTTTTCTTCAAAAGTAGCGGGAGCAATGGCATTGGAAGAAGGTAA
GGTGAAGATTGAGAAATTTGATGGGAGTGACTTTGGGTTTTGGAAGATGC
AGATAGAAGACTACCTTTATCAGAAGAAGTTGTATCTACCCTTAAGAGGA
GAGAAGCCAAATGACATGGAACAGTCAGATTGGGAGTTATTAGATCGGCA
GGCCCTTGGTGTGATTCGGCTGACATTAGCCAAGAATGTTGCGTTAAACA
TCATGAACAAGAAAACAACTGCAGATTTGATGCAAGCGTTATCAAATATG
TATGAGAAGCCCTCTCTAGCCAATAAAGTGTATTTGATTCGCAGACTTGT
CAACCTTAAAATGGATGAAGGTAACTCTGTTACTCATCATATTAGTAAAT
TTAATACAATTATTGCACAGTTGGCATCAATGCAAATAACTTTTGATGAT
GAAATAAAAGCATTACTTTTATTATCGTCTCTTCCGGAAAGTTGGGGTGC
TACTGTTACTATAGGTAGTAATTTTGCAAGCAATAGCAAGTTGAAGTTTG
ATAACATCCTTGACTTGATCTTAAGCGAAGATGTTCACAGGAGAAGTTTA
ATGGAATCTTCCCGTTCTAATTCTGGTTCAGCATTGAGTGTTGAGAATAG
AGGAAGAAATAGCCAGAAAGGTTGTAATCAAGGCCGAGGCAGATCAAAGT
CTAGAAGGAGATCACAAACAAAAGTACGAAATGATATCACCTGTTGGAAT
TGTCAGAAAAATGGTCACTTTAAAAATCAATGTCGTGCTTCAAGGAAGAA
CAACAACTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001878	Znf_CCHC
IPR036875	Znf_CCHC_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding

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