Vfaba.Hedin2.R1.1g058160.1

Transcript Overview
NameVfaba.Hedin2.R1.1g058160.1
Unique NameVfaba.Hedin2.R1.1g058160.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length825
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr1Schromosomechr1S:370403941..370404978 -Vicia faba inbred line Hedin/2 genome v1.0n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.1g058160Vfaba.Hedin2.R1.1g058160_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.1g058160.1_vfh_v1-exonVfaba.Hedin2.R1.1g058160.1_vfh_v1-exon-chr1S_vfh_v1:370403941..370404330Vicia fabaexon
Vfaba.Hedin2.R1.1g058160.1_vfh_v1-exonVfaba.Hedin2.R1.1g058160.1_vfh_v1-exon-chr1S_vfh_v1:370404544..370404978Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.1g058160.1_vfh_v1-cdsVfaba.Hedin2.R1.1g058160.1_vfh_v1-cds-chr1S_vfh_v1:370403941..370404330Vicia fabaCDS
Vfaba.Hedin2.R1.1g058160.1_vfh_v1-cdsVfaba.Hedin2.R1.1g058160.1_vfh_v1-cds-chr1S_vfh_v1:370404544..370404978Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.1g058160.1_vfh_v1Vfaba.Hedin2.R1.1g058160.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.1g058160.1_vfh_v1Vfaba.Hedin2.R1.1g058160.1_vfh_v1-proteinVicia fabapolypeptide


Homology
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.1g058160.1 vs.
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Hedin2.R1.1g058160.1 vs.
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Hedin2.R1.1g058160.1 vs.
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.1g058160.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g058160.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g058160.1; organism=Vicia faba; type=mRNA; length=825bp
ATGTGCCATAAGGTGATTCATCTACTTCCTAAAGATGGTTTGAAATGGTA
CCATTACAATTTCTTGAATAAGCCTATTGATCCTGAGTATTATGTTGATT
CTATTTTTGAAACCGAGTCGAGAGGAAAATTTCTCAAACTCTATGCAAAC
CACGACTTGTTGAAATTTATTGGTCTGAGCAAGAAATTTAACCCCGGTCA
TGTTAATGCCTTTTACTGCAACCTTGAACTTACTATTGTTGGACTTAAGA
GTAGATCCAAGATTAATGTTATGAAATTTGCATATGGTTATCTTACTAAG
TACCTTGGTTTGACTTCTTCTAGTGCAAGCATAATTGCTGCTAAATTGTC
TGAGTATGATAAAGTTCATTTTGTTCTGTCTATTTCCAAGTTTGTGGCTA
AGAACATTGTTATGTTAAACTTCCTTATTAGTCATACAATTCTAGAAGTT
AATGGTATTGTGTCCAAGGAAGAAGACTTCGTTGAAGATTTGACGATTAT
GGATGAATACAGATTTTCCATGATGAGGTACTACATATACATTGATGGTG
TTTACTATTATCTTGAGAAATCTGGCAGGCAGATGTATGATGACCGAATT
ATGGAAACAGTGAAGGACCCTTCTAATGAGGTTGGTGCATCTAGTTATGG
ACTATTATCTACTGATGTGAAAACTTATCTTGATAAGTTGGTTAGGAAGA
TTTTGGAGGATAACAAGGTCAAAGAAGAAATTATTATGGGTAAAATTGAA
GTTGTGGCAAAAAAAGGTGAAGAAAGCCGAAACAGGTTGAAAGAAGAATT
GAAGGACGATGAAATTCTGGTATGA
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protein sequence of Vfaba.Hedin2.R1.1g058160.1_vfh_v1

>Vfaba.Hedin2.R1.1g058160.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g058160.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g058160.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=274bp
MCHKVIHLLPKDGLKWYHYNFLNKPIDPEYYVDSIFETESRGKFLKLYAN
HDLLKFIGLSKKFNPGHVNAFYCNLELTIVGLKSRSKINVMKFAYGYLTK
YLGLTSSSASIIAAKLSEYDKVHFVLSISKFVAKNIVMLNFLISHTILEV
NGIVSKEEDFVEDLTIMDEYRFSMMRYYIYIDGVYYYLEKSGRQMYDDRI
METVKDPSNEVGASSYGLLSTDVKTYLDKLVRKILEDNKVKEEIIMGKIE
VVAKKGEESRNRLKEELKDDEILV
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mRNA from alignment at chr1S:370403941..370404978-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.1g058160.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g058160.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g058160.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1S:370403941..370404978- (Vicia faba
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