Vfaba.Hedin2.R1.5g174480.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5B7BYE3|A0A5B7BYE3_DAVIN (Dimer_Tnp_hAT domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_042422 PE=4 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.344e-52 Identity = 86/137 (62.77%), Postives = 110/137 (80.29%), Query Frame = 0 Query: 1 MELLSLSNSLVPKDIYKAFDLNNICALVDKFYSTDFSEHEKINLRYQLQHFHLDVVGHPDLNNLSTMSELCQALKKTGKTNTCYLIDRLIHVILTLPVSTATTERSFSAMKIIKT-LCNKTEDGFLTDNTMLYIEKE 136 +ELL+LS+SL P+D Y++F+++NIC LV KFY DF+E EKI L Y+LQH+ LD+ HPDL N+ST+SELC+ L +TGK T LIDRLI +ILTLPVSTATTER+FSAM I+KT L +K ED FLT+ ++YIEKE Sbjct: 47 VELLTLSSSLDPRDSYRSFNIDNICKLVKKFYPEDFTEQEKIRLPYELQHYRLDIAQHPDLQNMSTISELCRGLTETGKAVTYPLIDRLIRLILTLPVSTATTERAFSAMNIVKTRLRSKMEDYFLTNCLIIYIEKE 183
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445EFI4|A0A445EFI4_ARAHY (Dimer_Tnp_hAT domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A02g008944 PE=4 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.285e-52 Identity = 89/136 (65.44%), Postives = 105/136 (77.21%), Query Frame = 0 Query: 2 ELLSLSNSLVPKDIYKAFDLNNICALVDKFYSTDFSEHEKINLRYQLQHFHLDVVGHPDLNNLSTMSELCQALKKTGKTNTCYLIDRLIHVILTLPVSTATTERSFSAMKIIKT-LCNKTEDGFLTDNTMLYIEKE 136 ELL LS SL PKD++K F + NIC LV FYS DFSE EKI L Y+LQH+ LDVV PD NLST++ELCQ L +TGK+N LIDRLI ++LTLPV+TATTER+FSA+KIIKT L NK ED FL D ++YIEKE Sbjct: 16 ELLILSTSLDPKDVFKLFSVCNICNLVKNFYSLDFSEQEKIQLDYELQHYELDVVKAPDFQNLSTLAELCQKLTETGKSNIYPLIDRLIRLVLTLPVTTATTERAFSAIKIIKTRLRNKMEDEFLADCMIVYIEKE 151
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445EG70|A0A445EG70_ARAHY (Dimer_Tnp_hAT domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A02g008943 PE=4 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 2.764e-52 Identity = 89/136 (65.44%), Postives = 104/136 (76.47%), Query Frame = 0 Query: 2 ELLSLSNSLVPKDIYKAFDLNNICALVDKFYSTDFSEHEKINLRYQLQHFHLDVVGHPDLNNLSTMSELCQALKKTGKTNTCYLIDRLIHVILTLPVSTATTERSFSAMKIIKT-LCNKTEDGFLTDNTMLYIEKE 136 ELL LS SL PKD++K F + NIC LV FYS DFSE EKI L Y+LQH+ LDVV PD NLST++ELCQ L +TGK+N LIDRLI ++LTLPV+TATTER+FSAMKIIKT NK ED FL D ++YIEKE Sbjct: 57 ELLILSTSLDPKDVFKLFSVCNICNLVKNFYSLDFSEQEKIQLDYELQHYELDVVKAPDFQNLSTLAELCQKLTETGKSNIYPLIDRLIRLVLTLPVTTATTERAFSAMKIIKTRFRNKMEDEFLADCMIVYIEKE 192
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151TTU4|A0A151TTU4_CAJCA (Dimer_Tnp_hAT domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_009638 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 7.733e-51 Identity = 87/137 (63.50%), Postives = 105/137 (76.64%), Query Frame = 0 Query: 1 MELLSLSNSLVPKDIYKAFDLNNICALVDKFYSTDFSEHEKINLRYQLQHFHLDVVGHPDLNNLSTMSELCQALKKTGKTNTCYLIDRLIHVILTLPVSTATTERSFSAMKIIKT-LCNKTEDGFLTDNTMLYIEKE 136 MELL+LS +LVPKD YKAF++ +IC LVDK+Y DFSE EKINL +QLQHF +D +L NLSTM ELC L T K+ YLIDRL+ +I+TLPVSTATTERSFSAMKIIKT L NK E FL D+ ++YIE++ Sbjct: 89 MELLTLSMTLVPKDAYKAFNIEDICTLVDKYYPMDFSEQEKINLHFQLQHFIVDARQDSNLKNLSTMQELCTCLATTKKSEVYYLIDRLLRLIMTLPVSTATTERSFSAMKIIKTRLRNKMEADFLADSMIVYIERD 225
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151SM28|A0A151SM28_CAJCA (Dimer_Tnp_hAT domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_002034 PE=4 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.629e-50 Identity = 82/132 (62.12%), Postives = 103/132 (78.03%), Query Frame = 0 Query: 6 LSNSLVPKDIYKAFDLNNICALVDKFYSTDFSEHEKINLRYQLQHFHLDVVGHPDLNNLSTMSELCQALKKTGKTNTCYLIDRLIHVILTLPVSTATTERSFSAMKIIKT-LCNKTEDGFLTDNTMLYIEKE 136 LS +L PKD +K+F+ +IC+L KFYS+DFS+ E I++ Y+LQH+ DV P +NLST+ ELCQ L + GK+N LIDRLI ++LTLPVSTATTER+FSAMKIIKT LCNK EDGFLTD ++YIEKE Sbjct: 2 LSVALDPKDAFKSFNACDICSLAKKFYSSDFSDQEMIHMEYELQHYEFDVPKDPKFHNLSTLGELCQKLVEVGKSNVYPLIDRLIRLVLTLPVSTATTERAFSAMKIIKTSLCNKMEDGFLTDYMIVYIEKE 133
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151SHJ0|A0A151SHJ0_CAJCA (Dimer_Tnp_hAT domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_000404 PE=4 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 4.308e-50 Identity = 86/137 (62.77%), Postives = 105/137 (76.64%), Query Frame = 0 Query: 1 MELLSLSNSLVPKDIYKAFDLNNICALVDKFYSTDFSEHEKINLRYQLQHFHLDVVGHPDLNNLSTMSELCQALKKTGKTNTCYLIDRLIHVILTLPVSTATTERSFSAMKIIKT-LCNKTEDGFLTDNTMLYIEKE 136 MELL+LS +LVPKD YKAF++ +IC LVDK+Y DFSE EKINL +QLQHF +D +L NLSTM ELC L T K+ YLIDRL+ +I+TLPVSTATTERSFSAMKIIKT L NK + FL D+ ++YIE++ Sbjct: 100 MELLTLSMALVPKDAYKAFNIEDICTLVDKYYPMDFSEQEKINLHFQLQHFIVDARQDSNLKNLSTMQELCTCLATTKKSEVYYLIDRLLRLIMTLPVSTATTERSFSAMKIIKTRLRNKMKADFLADSMIVYIERD 236
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151SF14|A0A151SF14_CAJCA (Dimer_Tnp_hAT domain-containing protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_024752 PE=4 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 8.329e-50 Identity = 84/136 (61.76%), Postives = 105/136 (77.21%), Query Frame = 0 Query: 2 ELLSLSNSLVPKDIYKAFDLNNICALVDKFYSTDFSEHEKINLRYQLQHFHLDVVGHPDLNNLSTMSELCQALKKTGKTNTCYLIDRLIHVILTLPVSTATTERSFSAMKIIKT-LCNKTEDGFLTDNTMLYIEKE 136 ELL LS +L PKD +K+F+ +IC+L KFYS+DFS+ E I++ Y+LQH+ DV P +NLST+ ELCQ L + GK+N LIDRLI ++LTLPVSTATTER+FSAMKIIKT L NK EDGFLTD ++YIEKE Sbjct: 65 ELLMLSVALDPKDAFKSFNACDICSLAKKFYSSDFSDQEMIHMEYELQHYEFDVPKDPKFHNLSTLGELCQKLVEVGKSNVYPLIDRLIRLVLTLPVSTATTERAFSAMKIIKTSLRNKMEDGFLTDYMIVYIEKE 200
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151R424|A0A151R424_CAJCA (Zinc finger MYM-type protein 1 OS=Cajanus cajan OX=3821 GN=KK1_041513 PE=4 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.418e-48 Identity = 84/136 (61.76%), Postives = 105/136 (77.21%), Query Frame = 0 Query: 2 ELLSLSNSLVPKDIYKAFDLNNICALVDKFYSTDFSEHEKINLRYQLQHFHLDVVGHPDLNNLSTMSELCQALKKTGKTNTCYLIDRLIHVILTLPVSTATTERSFSAMKIIKT-LCNKTEDGFLTDNTMLYIEKE 136 ELL LS +L PKD +K+F+ +IC+L KFYS+DFS+ E I++ Y+LQH+ DV P +NLST+ ELCQ L + GK+N LIDRLI ++LTLPVSTATTER+FSAMKIIKT L NK EDGFLTD ++YIEKE Sbjct: 156 ELLMLSVALDPKDAFKSFNACDICSLAKKFYSSDFSDQEMIHMEYELQHYEFDVPKDPKFHNLSTLGELCQKLVEVGKSNVYPLIDRLIRLVLTLPVSTATTERAFSAMKIIKTSLRNKMEDGFLTDYMIVYIEKE 291
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151S9T6|A0A151S9T6_CAJCA (Zinc finger MYM-type protein 1 OS=Cajanus cajan OX=3821 GN=KK1_026671 PE=4 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 2.973e-48 Identity = 84/136 (61.76%), Postives = 105/136 (77.21%), Query Frame = 0 Query: 2 ELLSLSNSLVPKDIYKAFDLNNICALVDKFYSTDFSEHEKINLRYQLQHFHLDVVGHPDLNNLSTMSELCQALKKTGKTNTCYLIDRLIHVILTLPVSTATTERSFSAMKIIKT-LCNKTEDGFLTDNTMLYIEKE 136 ELL LS +L PKD +K+F+ +IC+L KFYS+DFS+ E I++ Y+LQH+ DV P +NLST+ ELCQ L + GK+N LIDRLI ++LTLPVSTATTER+FSAMKIIKT L NK EDGFLTD ++YIEKE Sbjct: 163 ELLMLSVALDPKDAFKSFNACDICSLAKKFYSSDFSDQEMIHMEYELQHYEFDVPKDPKFHNLSTLGELCQKLVEVGKSNVYPLIDRLIRLVLTLPVSTATTERAFSAMKIIKTSLRNKMEDGFLTDYMIVYIEKE 298
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2N9H7R5|A0A2N9H7R5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38349 PE=4 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 8.615e-48 Identity = 81/137 (59.12%), Postives = 107/137 (78.10%), Query Frame = 0 Query: 1 MELLSLSNSLVPKDIYKAFDLNNICALVDKFYSTDFSEHEKINLRYQLQHFHLDVVGHPDLNNLSTMSELCQALKKTGKTNTCYLIDRLIHVILTLPVSTATTERSFSAMKIIKT-LCNKTEDGFLTDNTMLYIEKE 136 +ELL+LS++L PK+ YK+F+++NIC LV+KFY DF+E EK LR+QLQH+ DV HPD N+ T+SELC+ L GK+ +L+DRLI ++LTLPVSTATTER+FSAMK +KT L N+ ED FL DN ++YIEKE Sbjct: 336 VELLNLSSALNPKNAYKSFNIDNICKLVEKFYPQDFTEQEKTLLRFQLQHYEFDVPKHPDFQNMDTISELCRGLASLGKSKIYHLVDRLIRLVLTLPVSTATTERAFSAMKHVKTRLRNRMEDEFLADNLVVYIEKE 472
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. Araport11
Match: AT1G19260.1 (| TTF-type zinc finger protein with HAT dimerization domain-containing protein | Chr1:6657260-6659569 REVERSE LENGTH=769 | 201606) HSP 1 Score: 77.0258 bits (188), Expect = 3.567e-17 Identity = 52/136 (38.24%), Postives = 80/136 (58.82%), Query Frame = 0 Query: 2 ELLSLSNSLVPKDIYKAFDLNNICALVDKFYSTDFSEHEKINLRYQLQHFHLDVVGHPDLNNLSTMSELCQALKKTGKTNTCYLIDRLIHVILTLPVSTATTERSFSAMKIIK-TLCNKTEDGFLTDNTMLYIEKE 136 ELL +SL P D ++ FD + + L + FY DFS E+ +L +QL+ + +V +L + +L + + +T K + L+ RL+ V L LPV+TAT ER FSAM +K TL N+ D FL+D + +IEK+ Sbjct: 611 ELLICMSSLSPIDSFRQFDKSMLVRLTE-FYPDDFSFVERRSLDHQLEIYLDNVKNDERFTDLKCLGDLARVMVETRKHLSHPLVYRLLKVSLILPVATATVERCFSAMNFVKTTLRNRIGDMFLSDCLVCFIEKQ 745
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. Araport11
Match: AT2G06541.2 (| TTF-type zinc finger protein with HAT dimerization domain-containing protein | Chr2:2598222-2600326 REVERSE LENGTH=564 | 201606) HSP 1 Score: 73.9442 bits (180), Expect = 4.281e-16 Identity = 45/135 (33.33%), Postives = 75/135 (55.56%), Query Frame = 0 Query: 2 ELLSLSNSLVPKDIYKAFDLNNICALVDKFYSTDFSEHEKINLRYQLQHFHLDVVGHPDLNNLSTMSELCQALKKTGKTNTCYLIDRLIHVILTLPVSTATTERSFSAMKIIKTLCNKTEDGFLTDNTMLYIEKE 136 ELL SL P D+++ FD + L + FY DF+ + +L +QL + ++ NL ++ +L + + +T K + + RL+ V+LTLP++TAT ER FSA + TL N+ D FL D + +++E Sbjct: 407 ELLGCVASLSPTDLFREFDQLKVMRLAE-FYPQDFTRVDWRSLEHQLGLYIDNIREDDRFANLKSLGDLARVMIETRKHLSHPQVYRLLKVVLTLPIATATVERCFSATVVKTTLRNRISDQFLNDYVVCLVKRE 540
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. Araport11
Match: AT2G06541.1 (| TTF-type zinc finger protein with HAT dimerization domain-containing protein | Chr2:2598222-2600326 REVERSE LENGTH=592 | 201606) HSP 1 Score: 73.9442 bits (180), Expect = 4.315e-16 Identity = 45/135 (33.33%), Postives = 75/135 (55.56%), Query Frame = 0 Query: 2 ELLSLSNSLVPKDIYKAFDLNNICALVDKFYSTDFSEHEKINLRYQLQHFHLDVVGHPDLNNLSTMSELCQALKKTGKTNTCYLIDRLIHVILTLPVSTATTERSFSAMKIIKTLCNKTEDGFLTDNTMLYIEKE 136 ELL SL P D+++ FD + L + FY DF+ + +L +QL + ++ NL ++ +L + + +T K + + RL+ V+LTLP++TAT ER FSA + TL N+ D FL D + +++E Sbjct: 435 ELLGCVASLSPTDLFREFDQLKVMRLAE-FYPQDFTRVDWRSLEHQLGLYIDNIREDDRFANLKSLGDLARVMIETRKHLSHPQVYRLLKVVLTLPIATATVERCFSATVVKTTLRNRISDQFLNDYVVCLVKRE 568
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. Araport11
Match: AT3G29765.1 (| General transcription factor 2-related zinc finger protein | Chr3:11595467-11597077 REVERSE LENGTH=536 | 201606) HSP 1 Score: 72.0182 bits (175), Expect = 1.761e-15 Identity = 50/136 (36.76%), Postives = 79/136 (58.09%), Query Frame = 0 Query: 2 ELLSLSNSLVPKDIYKAFDLNNICALVDKFYSTDFSEHEKINLRYQLQHFHLDVVGHPDLNNLSTMSELCQALKKTGKTNTCYLIDRLIHVILTLPVSTATTERSFSAMKIIK-TLCNKTEDGFLTDNTMLYIEKE 136 ELL +SL P D ++ FD + + L + FY DFS E+ +L +QL+ + +V +L + +L + + +T K + L+ RL+ + L LPV+TAT R FSAM +K TL N+ D FL+D + +IEK+ Sbjct: 378 ELLICMSSLSPIDSFRQFDKSMLVRLTE-FYPDDFSFVERRSLDHQLEIYLDNVKNDERFTDLEHLGDLARVMVETRKHLSHPLVYRLLKLSLILPVATATVVRCFSAMNFVKTTLRNRFGDVFLSDCLVCFIEKQ 512
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. Araport11
Match: AT3G31402.1 (| General transcription factor 2-related zinc finger protein | Chr3:12770931-12773539 REVERSE LENGTH=393 | 201606) HSP 1 Score: 62.003 bits (149), Expect = 5.460e-12 Identity = 44/123 (35.77%), Postives = 64/123 (52.03%), Query Frame = 0 Query: 2 ELLSLSNSLVPKDIYKAFDLNNICALVDKFYSTDFSEHEKINLRYQLQHFHLDVVGHPDLNNLSTMSELCQALKKTGKTNTCYLIDRLIHVILTLPVSTATTERSFSAMKIIKTLCNKTEDGF 124 ELL + SL P D + FD + + L KFY DFS E I++ +L + V +NL + ++ Q + +T K + RL+ ++L L V+TAT ER FSAMKI + N D F Sbjct: 251 ELLICAASLSPIDAFYEFDHSKLVRL-SKFYQVDFSLGEFISIEKELSIYIDTVRNDERFSNLKNLGDIAQKVVETRKHLSYPFGYRLLKLVLILHVATATVERCFSAMKIRSPVLNYQGDDF 372
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. Araport11
Match: AT3G31402.2 (| General transcription factor 2-related zinc finger protein | Chr3:12770931-12773539 REVERSE LENGTH=311 | 201606) HSP 1 Score: 61.6178 bits (148), Expect = 5.807e-12 Identity = 44/123 (35.77%), Postives = 64/123 (52.03%), Query Frame = 0 Query: 2 ELLSLSNSLVPKDIYKAFDLNNICALVDKFYSTDFSEHEKINLRYQLQHFHLDVVGHPDLNNLSTMSELCQALKKTGKTNTCYLIDRLIHVILTLPVSTATTERSFSAMKIIKTLCNKTEDGF 124 ELL + SL P D + FD + + L KFY DFS E I++ +L + V +NL + ++ Q + +T K + RL+ ++L L V+TAT ER FSAMKI + N D F Sbjct: 169 ELLICAASLSPIDAFYEFDHSKLVRL-SKFYQVDFSLGEFISIEKELSIYIDTVRNDERFSNLKNLGDIAQKVVETRKHLSYPFGYRLLKLVLILHVATATVERCFSAMKIRSPVLNYQGDDF 290 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.5g174480.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 6 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.5g174480.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g174480.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g174480.1; organism=Vicia faba; type=mRNA; length=411bpback to top protein sequence of Vfaba.Hedin2.R1.5g174480.1_vfh_v1 >Vfaba.Hedin2.R1.5g174480.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g174480.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g174480.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=136bpback to top mRNA from alignment at chr5:1215207102..1215207512- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.5g174480.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g174480.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g174480.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:1215207102..1215207512- (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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