Vfaba.Hedin2.R1.5g177640.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.5g177640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XEM1|A0A1S2XEM1_CICAR (uncharacterized protein LOC101495594 OS=Cicer arietinum OX=3827 GN=LOC101495594 PE=4 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 7.213e-21 Identity = 85/253 (33.60%), Postives = 119/253 (47.04%), Query Frame = 0 Query: 1 MSYMNLKNLIKDEGYRNIKCTWYWNPKYSFSRGLRPLNCDSDVLKFAEDIKGFELVDVYVEHSIEVTPIEDD-------DYGGLNYVHDEVDSD------VQIISNHDEAE--------VEVESEHVEAEV------EDGSEHIEAEVEV------RIDDDEDYIGSGGKI----------SSSSHDDYKLNEHVVEGENVEQNVDLDWTTAIPCDEPGDKVRNYDKDDDSDMLHTPNESGSDEEHV-EFPSF 209 MS++ + LIK GY +IKC WY +PKYSF+RGLRPLN D DV+KFAED+K F ++DV++EHSI+ I D+ + L ++V ++ VQI N E E V+ E + +E+E + SE ++ E E ++DEDYI + I SS H + + N N E+N D + D L TP ES DEE V +FP F Sbjct: 19 MSHIQITKLIKSLGYMSIKCLWYQHPKYSFTRGLRPLNNDEDVVKFAEDVKWFNIIDVFMEHSIDNPIISDESPIQEPIEAEKLQGEGEQVQTEPVQAETVQIKPNQPETEPDQLDSEPVQTEQDKLESEPIQTEPDQPDSEPVQPESEAVHGEDYLSEEDEDYIATSMMIWIFVNVGDENSSERHANPRGNPGPSSTTNFEEN-----------------------DVNYDDLDTPPESEVDEEDVRKFPKF 248
BLAST of Vfaba.Hedin2.R1.5g177640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q7YBE4|A0A3Q7YBE4_CICAR (uncharacterized protein LOC113784480 OS=Cicer arietinum OX=3827 GN=LOC113784480 PE=4 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 3.270e-19 Identity = 61/150 (40.67%), Postives = 85/150 (56.67%), Query Frame = 0 Query: 1 MSYMNLKNLIKDEGYRNIKCTWYWNPKYSFSRGLRPLNCDSDVLKFAEDIKGFELVDVYVEHSIEVTPIEDDDYGGLNYVHDEVDSD-VQIISNHDEAEVEV--------ESEHVEAEV-EDGSEHIEAEVEV------RIDDDEDYIGS 134 MS+M + ++K GY + K WY +PKYSF+RGLRPLN D DVLKFAED+KGF ++DV+VEH I+ E D D+ + + VQ+ S + E E ESE V+ E + SE +E E E ++DEDY+ + Sbjct: 66 MSHMQITKMVKSLGYMSFKSLWYQHPKYSFTRGLRPLNNDEDVLKFAEDVKGFNVIDVFVEHCIDNPETEPDQPDSEPLQPDQPEPEAVQLESEAVQPESEAVQTEEDKSESEPVQTEPDQPQSEPVEPESEAVHGEDYLSEEDEDYVAN 215
BLAST of Vfaba.Hedin2.R1.5g177640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6P7R7|A0A2Z6P7R7_TRISU (ZnF_PMZ domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_84730 PE=4 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.535e-17 Identity = 74/234 (31.62%), Postives = 122/234 (52.14%), Query Frame = 0 Query: 1 MSYMNLKNLIKDEGYRNIKCTWYWNPKYSFSRGLRPLNCDSDVLKFAEDIKGFELVDVYVEHSIEVTPIEDDDYGGLNYVHDEVDSDVQIISNHDEAEVEVESEHV-EAEVEDGSEHIEAEVEVRIDDDEDYIGSGGKISSSSHDDYKLNEHVVEGENVEQNVDL----DWTTAIP-------CDE--PGDKVRNYD---------KDDDSDMLHTPNESGSDEE-HVEFPSFK 210 MSYM++ LIK GY + K +Y +PK + S GLRPL+CD DVLKFA D+ G+E++++YVEH ++ TPI ++ ++++ ++ + + +E +E+E + + E + E++E E EV + + + + S ++Y N V + E + D +W T +P C P + V N D +DDDSD+L TP S DE +FP +K Sbjct: 74 MSYMDISTLIKSLGYSDFKSLYYRHPKLALSHGLRPLHCDDDVLKFANDVNGYEVIEIYVEHLLD-TPIVVEE-----HINETINGKGKRKAFDEEVVIELEDAYKGDGEGDSEGEYVELEDEVDVQGNANIDDE----NDSEDEEYVANSDDVSDDYTEDDSDFKENWNWATVLPQETVNEVCSNVGPIENVMNLDPIMTAEFELEDDDSDILDTPKGSEIDEATRPKFPKYK 297
BLAST of Vfaba.Hedin2.R1.5g177640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NMD3|A0A2Z6NMD3_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_400350 PE=4 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.182e-16 Identity = 78/235 (33.19%), Postives = 121/235 (51.49%), Query Frame = 0 Query: 1 MSYMNLKNLIKDEGYRNIKCTWYWNPKYSFSRGLRPLNCDSDVLKFAEDIKGFELVDVYVEHSIEVTPIEDDDYGGLNYVHDEVDSDVQIISNHDEAEVEVESEHVEAEVEDGSEHIEAEVEVRIDDDEDYIGSGG--KISSSSHDDYKLNEHVVEGENVEQNVDL----DWTTAIP-------CDE--PGDKVRNYD---------KDDDSDMLHTPNESGSDEE-HVEFPSFK 210 MSYM++ LIK GY + K +Y +PK + S GL PL+CD DVLKFA D+ G+E+++VYVEH ++ TPI ++ ++++ ++ + + +E +E+E +A DG E E V +DD+ D G+ + S ++Y N V + E + D +W T +P C P + V N D +DDDSD+L TP S DE +FP +K Sbjct: 74 MSYMDISKLIKSLGYSDFKSLYYRHPKLALSHGLSPLHCDDDVLKFANDVNGYEVIEVYVEHLLD-TPIVVEE-----HINETINGKGKRKAFDEEVVIELE----DAYEGDGEGDSEGEY-VELDDEVDVQGNANIDDENDSEDEEYVANSDDVSDDYTEDDSDFEENWNWATVLPQETVNEVCSNVGPIENVMNLDPIMPAEFELEDDDSDILDTPEGSEIDEATRPKFPKYK 297
BLAST of Vfaba.Hedin2.R1.5g177640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6PF55|A0A2Z6PF55_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_407250 PE=4 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.204e-16 Identity = 73/254 (28.74%), Postives = 123/254 (48.43%), Query Frame = 0 Query: 1 MSYMNLKNLIKDEGYRNIKCTWYWNPKYSFSRGLRPLNCDSDVLKFAEDIKGFELVDVYVEHSIEVTPIEDDDYGGLNYVHDEVDSDVQIISNHDEAEVEVESEHVEAEVEDGSEHIEAEVEVRIDDDEDYIGSGGKISSSSHDDYKLNEHVVEGENVEQNVDLDWTTAIPCD---------EPGDKVRNYD---------KDDDSDMLHTPNESGSDEEHV-EFPSFK--SESSKLRLEAHHKPLHLHSHLNS 233 MSY ++ L+K GY K +Y +PK + SRGLRPLNCD +VL F EDIKG+E+V+VY+EH ++ TPI ++ D+ HD+ + + ID++ DY+ + ++S N++ ++ + E+N WT+ +P + +P + V N + ++ DSD+L+TP S DE V FP+F+ ++ ++ E K +L S +N+ Sbjct: 17 MSYKDVVELVKSLGYTEFKSLYYRHPKLALSRGLRPLNCDDNVLTFVEDIKGYEVVEVYLEHLVD-TPI-------------LIEEDI-----HDKGKGKT-----------------------IDEEVDYVANSEEVS---------NDYTIDESDYEEN--WHWTSVLPEEMVKEVHSNVDPSENVMNLNPNMRVEFEVENYDSDILNTPPGSEDDEATVMNFPTFRMSNDDENIKFEKGMK-FNLKSVVNT 216
BLAST of Vfaba.Hedin2.R1.5g177640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6M0H4|A0A2Z6M0H4_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_202990 PE=4 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.893e-16 Identity = 73/222 (32.88%), Postives = 111/222 (50.00%), Query Frame = 0 Query: 1 MSYMNLKNLIKDEGYRNIKCTWYWNPKYSFSRGLRPLNCDSDVLKFAEDIKGFELVDVYVEHSIEVTPIEDDDYGGLNYVHDEVDSDVQIISNHDEAEVEVESEHVEAEVEDGSEHIEAEVEVRIDDDEDYIGSGGKISSSSHDDYKLNEHVVEGENVEQNVDLDWTTAIPCD-----------EPGDKVRNYDKDDDSDMLHTPNESGSDE-EHVEFPSFK 210 S ++L+N++K GY ++KC WY +PKYSF GLRP N DSD K ED KG+ +D+YVEHSI+ +PI +D + +I + D+ ++ V+ + E E +DDEDYI + G +DD + +V+ D DWT +P + +V + D D++SD L TP ES DE ++ +FP +K Sbjct: 45 FSVLDLENIVKSLGYVDLKCMWYHHPKYSFVDGLRPFNNDSDFQKLVEDSKGYNTIDLYVEHSID-SPIV------------CLDRETPVIVDIDDEGPLLDEYGVDGVETEEVRVEEGLTES--EDDEDYIANYG----DENDDTDFDGDLVDE-------DWDWTHELPTETFVGNDATVYQRNTTQVEHEDVDNESD-LQTPPESEDDEADNRKFPKYK 239
BLAST of Vfaba.Hedin2.R1.5g177640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6N1A6|A0A2Z6N1A6_TRISU (SWIM-type domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_161700 PE=4 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.602e-16 Identity = 84/237 (35.44%), Postives = 123/237 (51.90%), Query Frame = 0 Query: 1 MSYMNLKNLIKDEGYRNIKCTWYWNPKYSFSRGLRPLNCDSDVLKFAEDIKGFELVDVYVEHSIEVTP--IEDD--DYGGLNYVHDEVDSDVQIISNHD---EAEVEVESEHVE-AEVEDGSEHIEAEVEVRIDDDEDYIGSGGKISSSSHDDYKLNEHVVEGENVEQNVDLDWTTAIPCD---------EPGDKVRNYDKDD---------DSDMLHTPNESGSDEEHV-EFPSFK 210 MSY ++ L+K G +Y +PK + SRGLRPLNCD +VL F EDIKG+E+V+VY+EH ++ TP IE+D D G + +EV DV D E EVE ES+ V+ ++ EDG DY+ + ++S DDY ++E + E+N DWT+ +P + +P + V N + + DSD+L+TP S DE V FP+F+ Sbjct: 71 MSYKDVVELVKSLGL------YYRHPKLALSRGLRPLNCDDNVLTFVEDIKGYEVVEVYLEHLVD-TPILIEEDIHDKGKGKTIDEEVVIDVDDEYEGDGDYEDEVEGESDKVDLSDTEDG----------------DYVANSEEVS----DDYTIDE-----SDFEEN--WDWTSVLPEEMVKEVHSNVDPSENVMNLNPNMRVEFEVENYDSDILNTPPGSEDDEATVMNFPTFR 273
BLAST of Vfaba.Hedin2.R1.5g177640.1 vs. UniProtKB/TrEMBL
Match: tr|G7KG91|G7KG91_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_5g012040 PE=4 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.704e-15 Identity = 53/143 (37.06%), Postives = 80/143 (55.94%), Query Frame = 0 Query: 13 EGYRNIKCTWYWNPKYSFSRGLRPLNCDSDVLKFAEDIKGFELVDVYVEHSIEVTPIEDDDYGGL-------------------NYVHDEVDSDVQIISNHDEAEVEVESEHVEAEVEDGSE-HIEAEVEVRIDDDEDYIGSG 135 E Y++I WYWN +SF+RGLRPLN D DVL F EDI GF + DVYV+HS++ +++++ L N V E ++ + + +E EVEV++E V E E + H A V+ +++DD D++ SG Sbjct: 3 EEYKSITYLWYWNLGFSFARGLRPLNNDVDVLNFIEDISGFNVADVYVKHSVDNPIVKEEEIIALKKCNETDFAIGTESDDERINGVEVEFQNEEGVRVDANEIEVEVQNEGVGLEDEVNPQVHDGANVKGQMNDDVDFVPSG 145
BLAST of Vfaba.Hedin2.R1.5g177640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371I113|A0A371I113_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_07035 PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.481e-15 Identity = 37/68 (54.41%), Postives = 49/68 (72.06%), Query Frame = 0 Query: 1 MSYMNLKNLIKDEGYRNIKCTWYWNPKYSFSRGLRPLNCDSDVLKFAEDIKGFELVDVYVEHSIEVTP 68 MSY+++ LIK GY K WY + + S S+GL+PLNCD DVLKF ED+K FE+V V+V+H I+ TP Sbjct: 8 MSYIDITKLIKSIGYVYFKSLWYQHLRLSLSQGLKPLNCDGDVLKFVEDVKTFEVVSVFVKHLID-TP 74
BLAST of Vfaba.Hedin2.R1.5g177640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445FBB8|A0A445FBB8_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_050248 PE=4 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.358e-15 Identity = 45/111 (40.54%), Postives = 72/111 (64.86%), Query Frame = 0 Query: 1 MSYMNLKNLIKDEGYRNIKCTWYWNPKYSFSRGLRPLNCDSDVLKFAEDIKGFELVDVYVEHSI------EVTPIEDDDYGGLNYVHDE--VDSDVQIISNHDEAEVEVES 103 MSY++L +IK GY+ KC WY +PK + RGL+PLN DSD+L+ AED+ GF++V+VYVE + ++ ++ D+ ++ V E V+++VQ+ EA+VE E+ Sbjct: 182 MSYIDLMKVIKSIGYKAFKCLWYRHPKKALCRGLKPLNGDSDILQLAEDVAGFDVVEVYVEDGVIDRCDKKLNDLKGDEVVVIDGVEGEPVVEAEVQV-----EAKVEAEA 287 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.5g177640.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.5g177640.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.5g177640.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.5g177640.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g177640.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g177640.1; organism=Vicia faba; type=mRNA; length=711bpback to top protein sequence of Vfaba.Hedin2.R1.5g177640.1_vfh_v1 >Vfaba.Hedin2.R1.5g177640.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g177640.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g177640.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=236bpback to top mRNA from alignment at chr5:1234956700..1234957410- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.5g177640.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g177640.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g177640.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:1234956700..1234957410- (Vicia fababack to top |