Vfaba.Tiffany.R1.1g104600.1

Transcript Overview


Name	Vfaba.Tiffany.R1.1g104600.1
Unique Name	Vfaba.Tiffany.R1.1g104600.1_tif_v1
Type	mRNA
Organism	Vicia faba (Faba bean)
Sequence length	585

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr1S	chromosome	chr1S:914078183..914080032 -	Vicia faba cv. Tiffany genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vicia faba cv. Tiffany genome v1.0	2023-05-02
InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11	2023-05-10

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
tifzwsR096	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
tifzwsR131	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
tifzwsR135	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
catifL125	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
catifL134	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
catifL598	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
crtifL160	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
crtifL176	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
crtifL746	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
tiftifL081	Vicia faba cv. Tiffany genome v1.0	Vicia faba
tiftifR112	Vicia faba cv. Tiffany genome v1.0	Vicia faba
tiftifR113	Vicia faba cv. Tiffany genome v1.0	Vicia faba
tifvfhR071	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
tifvfhR078	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
tifvuR157	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
tifvuR160	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
tifvfhR099	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
tifvuR180	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
tifvuR193	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
caitifL176	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caitifL177	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caitifL187	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caitifL197	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caitifL231	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caitifL816	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
tifvuaR116	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
tifvuaR126	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
tifvssR130	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
tifvuaR141	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
tifvssR139	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
tifvuaR153	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
tifvssR163	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
cantifL108	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
cantifL117	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
cantifL535	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Vfaba.Hedin2.R1.1g137360.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.1g104600	Vfaba.Tiffany.R1.1g104600_tif_v1	Vicia faba	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.1g104600.1_tif_v1-exon	Vfaba.Tiffany.R1.1g104600.1_tif_v1-exon-chr1S_tif_v1:914078183..914078681	Vicia faba	exon
Vfaba.Tiffany.R1.1g104600.1_tif_v1-exon	Vfaba.Tiffany.R1.1g104600.1_tif_v1-exon-chr1S_tif_v1:914079947..914080032	Vicia faba	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.1g104600.1_tif_v1-cds	Vfaba.Tiffany.R1.1g104600.1_tif_v1-cds-chr1S_tif_v1:914078183..914078681	Vicia faba	CDS
Vfaba.Tiffany.R1.1g104600.1_tif_v1-cds	Vfaba.Tiffany.R1.1g104600.1_tif_v1-cds-chr1S_tif_v1:914079947..914080032	Vicia faba	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.1g104600.1_tif_v1	Vfaba.Tiffany.R1.1g104600.1_tif_v1	Vicia faba	polypeptide
Vfaba.Tiffany.R1.1g104600.1_tif_v1	Vfaba.Tiffany.R1.1g104600.1_tif_v1-protein	Vicia faba	polypeptide

Homology

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/TrEMBL
Match: tr|G7K2Q8|G7K2Q8_MEDTR (Threonyl-tRNA synthetase OS=Medicago truncatula OX=3880 GN=11405640 PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 1.534e-82
Identity = 124/151 (82.12%), Postives = 134/151 (88.74%), Query Frame = 0

Query:   40 AATPAVVFVHAKDESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYY 190
            ++  A+V  H KDESYL+ATIPKR+ +FE +QAEQQTRRLSLS DPIKVTLPDG VKEGKKWQ T FD+AREISKNLANNALI KVNGVLWDMNRPLEEDS LQ+FKFDDDEGRDTFW+SSAHILG  LETEY CKLCIGPCTTR EGFYY
Sbjct:   31 SSAAAMVVAHPKDESYLAATIPKRVQIFEALQAEQQTRRLSLSPDPIKVTLPDGNVKEGKKWQTTPFDIAREISKNLANNALISKVNGVLWDMNRPLEEDSSLQLFKFDDDEGRDTFWHSSAHILGQSLETEYGCKLCIGPCTTRGEGFYY 181

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A392QHD1|A0A392QHD1_9FABA (Threonine--tRNA ligase mitochondrial-like (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 2.080e-81
Identity = 117/142 (82.39%), Postives = 125/142 (88.03%), Query Frame = 0

Query:   45 VVFVHAKDESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREE 186
            +V  H KD++YLSATIPKRI +FE IQAEQQTRRLSLS DPIKVTLPDG VKE KKWQ T FD+AREISKNLANNALI KVN VLWDMNRPLEEDS LQ+FKF+DDEGRDTFW+SSAHILG  LETEY CKLCIGPCTTR E
Sbjct:    1 MVVAHPKDDAYLSATIPKRIQLFEAIQAEQQTRRLSLSPDPIKVTLPDGTVKEAKKWQTTPFDIAREISKNLANNALISKVNDVLWDMNRPLEEDSKLQIFKFEDDEGRDTFWHSSAHILGQSLETEYGCKLCIGPCTTRGE 142

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3JP18|A0A2K3JP18_TRIPR (Threonine-tRNA ligase mitochondrial-like (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g049407 PE=4 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.551e-81
Identity = 120/147 (81.63%), Postives = 128/147 (87.07%), Query Frame = 0

Query:   40 AATPAVVFVHAKDESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREE 186
            AAT  +V  H KD++YLSATIPKRI +FE IQAEQQTRRLSLS DPIKVTLPDG VKE KKWQ T FD+AREISKNLANNALI KVN VLWDMNRPLEEDS LQ+FKF+DDEGRDTFW+SSAHILG  LETEY CKLCIGPCTTR E
Sbjct:   34 AAT--MVVAHPKDDAYLSATIPKRIQLFESIQAEQQTRRLSLSPDPIKVTLPDGTVKEAKKWQTTPFDIAREISKNLANNALIAKVNDVLWDMNRPLEEDSKLQIFKFEDDEGRDTFWHSSAHILGQSLETEYGCKLCIGPCTTRGE 178

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XK38|A0A1S2XK38_CICAR (Threonyl-tRNA synthetase OS=Cicer arietinum OX=3827 GN=LOC101507141 PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 6.526e-80
Identity = 122/145 (84.14%), Postives = 130/145 (89.66%), Query Frame = 0

Query:   46 VFVHAKDESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYY 190
            + VHAKDESYL+ATIPKR+ +FE IQAEQQ RRLSLS+DPIKVTLPDG VKEGKKWQ T  DVAREISKNLANNALI KVNGVLWDM RPLEEDS LQ+F+FDDDEGRDTFW+SSAHILG  LETEY CKLCIGPCTTR EGFYY
Sbjct:   45 MVVHAKDESYLAATIPKRVRIFESIQAEQQIRRLSLSADPIKVTLPDGSVKEGKKWQTTPLDVAREISKNLANNALIAKVNGVLWDMTRPLEEDSQLQIFRFDDDEGRDTFWHSSAHILGQSLETEYGCKLCIGPCTTRGEGFYY 189

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MYJ2|A0A2Z6MYJ2_TRISU (Threonyl-tRNA synthetase OS=Trifolium subterraneum OX=3900 GN=TSUD_220650 PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 3.370e-79
Identity = 127/165 (76.97%), Postives = 138/165 (83.64%), Query Frame = 0

Query:   26 LKNSNCFYSSPTVFAATPAVVFVHAKDESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYY 190
            L  SN F+SS  + +A   +V  H KD++YLSATIPKRI +FE IQAEQQTRRLSLS DPIKVTLPDG VKE KKWQ T FD+AREISKNLANNALI KVN VLWDMNRP EEDS LQ+FKF+DDEGRDTFW+SSAHILG  LETEY CKLCIGPCTTR EGFYY
Sbjct:   16 LHLSNRFFSSSILSSAAATMVVAHPKDDAYLSATIPKRIQLFEAIQAEQQTRRLSLSPDPIKVTLPDGTVKEAKKWQTTPFDIAREISKNLANNALIAKVNDVLWDMNRPFEEDSKLQIFKFEDDEGRDTFWHSSAHILGQSLETEYGCKLCIGPCTTRGEGFYY 180

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9USY8|A0A0L9USY8_PHAAN (Threonyl-tRNA synthetase OS=Phaseolus angularis OX=3914 GN=LR48_Vigan06g097000 PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.943e-75
Identity = 116/152 (76.32%), Postives = 128/152 (84.21%), Query Frame = 0

Query:   39 FAATPAVVFVHAKDESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYY 190
            F++  A +  HAKD++YL A IPKRI +F+ IQAEQ+T+RLSLS DPIKVTLPDG VKE KKW  T  DVAREISKNLANNALI KVNGVLWDM RPLE+D  LQ+FKFDDDEGRDTFW+SSAHILG  LETEY CKLCIGPCTTR EGFYY
Sbjct:   26 FSSAGAAMVAHAKDDAYLQAAIPKRIKLFDTIQAEQRTQRLSLSPDPIKVTLPDGGVKEAKKWLSTPLDVAREISKNLANNALIAKVNGVLWDMTRPLEDDCQLQIFKFDDDEGRDTFWHSSAHILGQSLETEYGCKLCIGPCTTRGEGFYY 177

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/TrEMBL
Match: tr|V7CJK2|V7CJK2_PHAVU (Threonyl-tRNA synthetase OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G072800g PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 4.749e-75
Identity = 116/152 (76.32%), Postives = 127/152 (83.55%), Query Frame = 0

Query:   39 FAATPAVVFVHAKDESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYY 190
            F++  A +  HAKD++YL A IPKRI +F+ IQAEQQT+RLSLS DPIKV LPDG V+E KKW  T  DVAREISKNLANNALI KVNGVLWDM RPLEED  LQ+FKFDDDEGRDTFW+SSAHILG  LETEY CKLCIGPCTTR EGFYY
Sbjct:   26 FSSAVAAMVAHAKDDAYLQAAIPKRIQLFQTIQAEQQTQRLSLSPDPIKVNLPDGGVREAKKWLTTPLDVAREISKNLANNALIAKVNGVLWDMTRPLEEDCQLQIFKFDDDEGRDTFWHSSAHILGQSLETEYGCKLCIGPCTTRGEGFYY 177

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VYW3|A0A1S3VYW3_VIGRR (Threonyl-tRNA synthetase OS=Vigna radiata var. radiata OX=3916 GN=LOC106779743 PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 5.743e-75
Identity = 116/152 (76.32%), Postives = 128/152 (84.21%), Query Frame = 0

Query:   39 FAATPAVVFVHAKDESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYY 190
            F++  A +  HAKD++YL A IPKRI +FE IQAEQ+T+RLSLSSDPIKVTLPDG +KE KKW  T  DVAREISKNLANNALI KVNGVLWDM RPLE+D  LQ+FKFDDDEGRDTFW+SSAHILG  LE EY CKLCIGPCTTR EGFYY
Sbjct:   26 FSSAGAAMVAHAKDDAYLQAAIPKRIKLFETIQAEQRTQRLSLSSDPIKVTLPDGGMKEAKKWLSTPLDVAREISKNLANNALIAKVNGVLWDMTRPLEDDCQLQIFKFDDDEGRDTFWHSSAHILGQSLEMEYGCKLCIGPCTTRGEGFYY 177

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3T3W6|A0A0S3T3W6_PHAAN (Threonyl-tRNA synthetase OS=Vigna angularis var. angularis OX=157739 GN=Vigan.10G100700 PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 6.450e-75
Identity = 116/152 (76.32%), Postives = 128/152 (84.21%), Query Frame = 0

Query:   39 FAATPAVVFVHAKDESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYY 190
            F++  A +  HAKD++YL A IPKRI +F+ IQAEQ+T+RLSLS DPIKVTLPDG VKE KKW  T  DVAREISKNLANNALI KVNGVLWDM RPLE+D  LQ+FKFDDDEGRDTFW+SSAHILG  LETEY CKLCIGPCTTR EGFYY
Sbjct:   26 FSSAGAAMVAHAKDDAYLQAAIPKRIKLFDTIQAEQRTQRLSLSPDPIKVTLPDGGVKEAKKWLSTPLDVAREISKNLANNALIAKVNGVLWDMTRPLEDDCQLQIFKFDDDEGRDTFWHSSAHILGQSLETEYGCKLCIGPCTTRGEGFYY 177

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6LQ17|A0A4D6LQ17_VIGUN (Threonyl-tRNA synthetase OS=Vigna unguiculata OX=3917 GN=DEO72_LG4g1567 PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 1.113e-74
Identity = 116/152 (76.32%), Postives = 128/152 (84.21%), Query Frame = 0

Query:   39 FAATPAVVFVHAKDESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYY 190
            F++  A +  HAKD++YL A IPKRI +FE IQAEQ+T+RLSLS DPIKVTLPDG V+E KKW  T  DVAREISKNLANNALI KVNGVLWDM RPLE+D  LQ+FKFDDDEGRDTFW+SSAHILG  LETEY CKLCIGPCTTR EGFYY
Sbjct:   26 FSSAVAAMVAHAKDDAYLQAAIPKRIKLFETIQAEQRTQRLSLSPDPIKVTLPDGGVREAKKWLSTPLDVAREISKNLANNALIAKVNGVLWDMTRPLEDDCQLQIFKFDDDEGRDTFWHSSAHILGQSLETEYGCKLCIGPCTTRGEGFYY 177

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/Swiss-Prot
Match: sp|O04630|SYTM1_ARATH (Threonine--tRNA ligase, mitochondrial 1 OS=Arabidopsis thaliana OX=3702 GN=THRRS PE=1 SV=3)

HSP 1 Score: 214.927 bits (546), Expect = 8.172e-65
Identity = 101/152 (66.45%), Postives = 114/152 (75.00%), Query Frame = 0

Query:   39 FAATPAVVFVHAKDESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYY 190
            F   P +   H KDE+YLSA IPKRI +FE IQA Q     SL  DPIKVTLPDG VKEGKKW+ T  D+A +ISK LAN+ALI  V+ VLWDMNRPLE D  L++FKFD D+GRDT W+SSAHILG  LE EY C+LCIGPCTTR EGFYY
Sbjct:   28 FCTVPTMAANHPKDEAYLSAVIPKRIKLFEQIQANQLENLKSLPHDPIKVTLPDGNVKEGKKWETTPMDIAAQISKGLANSALISAVDDVLWDMNRPLEGDCKLELFKFDSDKGRDTLWHSSAHILGQALEQEYGCQLCIGPCTTRGEGFYY 179

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8GZ45|SYTC_ARATH (Probable threonine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At1g17960 PE=2 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 3.528e-58
Identity = 91/146 (62.33%), Postives = 110/146 (75.34%), Query Frame = 0

Query:   49 HAKDESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTL-PDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYYTLL 193
            H KDE+YLS+ IPKRI +FE IQAEQ  +  S   DPIK+TL PDG  KEG++W+ +  D+A +ISK LA +AL+  VN VLWDMNRPLE D  L++F FD D+GR+TFW+SSAHILG  LE EY CKLCIGPC  R+EGFYY  L
Sbjct:    6 HPKDEAYLSSVIPKRIRLFEEIQAEQLEQLQSRPHDPIKITLLPDGIEKEGRRWETSPMDIAVQISKGLAKSALVSSVNHVLWDMNRPLEGDCSLEIFGFDSDQGRNTFWHSSAHILGQALEQEYGCKLCIGPCEPRDEGFYYDSL 151

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/Swiss-Prot
Match: sp|P52709|SYTC_CAEEL (Threonine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=tars-1 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.974e-36
Identity = 64/141 (45.39%), Postives = 93/141 (65.96%), Query Frame = 0

Query:   52 DESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYYTL 192
            D +   A I +RI +++ ++AE      +  S+PI++TLPDGK+ EGK W+ T F++A  ISK LA  A+I KVNG +WD++RP E ++ L++ KFDDDE +  FW+SSAH+LG  +E      LC GP    +EGFYY +
Sbjct:   48 DMAPWPAFIEERIKLWDKLKAEYDAEIAAKESEPIQITLPDGKIHEGKTWRTTPFEIAERISKGLAEAAVIAKVNGAVWDLDRPFEGNAKLELLKFDDDEAKQVFWHSSAHVLGEAMERYCGGHLCYGPPI--QEGFYYDM 186

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q54J66|SYTC1_DICDI (Probable threonine--tRNA ligase 1, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=thrS1 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.461e-34
Identity = 64/134 (47.76%), Postives = 92/134 (68.66%), Query Frame = 0

Query:   60 IPKRISVFEGIQAEQQTRRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNG-VLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYYTL 192
            + +RI ++E ++A+       +  +PI VTLPDGKV  G K + T +D+A+ IS+ LA++ +  KVNG  +WD++RPLE D  LQ+ KFD +EG+ TFW+SSAHILG  +E  Y  +LCIGP T+  EGFYY +
Sbjct:   50 VKERIEIWESLKAKHLESLKDMKEEPINVTLPDGKVVAGIKNKTTPYDIAKGISRGLADSIVSSKVNGEQIWDISRPLEADCNLQLCKFDSEEGKKTFWHSSAHILGQAMERIYGGQLCIGPATS--EGFYYDM 181

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q0V9S0|SYTC2_XENTR (Threonine--tRNA ligase 2, cytoplasmic OS=Xenopus tropicalis OX=8364 GN=tars3 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.576e-31
Identity = 62/147 (42.18%), Postives = 90/147 (61.22%), Query Frame = 0

Query:   49 HAKDESYLSATIPKRISVFEGIQAEQQT---RRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYYTL 192
            H ++       I  R++++E ++ E       R +  S PIK+TL DGK  +G+ W+ T + VA  ISK LA+N +I KVN  LWD++RPLE+DS +++ KFD +E +  +W+SSAHILG  +E  Y   LC GP    E GFYY +
Sbjct:  134 HKQEGPCAPGFIKDRLALYETLKNEHDALLAARAAHQSKPIKITLADGKQVDGESWKTTPYQVAIGISKGLADNVVIAKVNNELWDLDRPLEQDSNVELLKFDSEEAQAVYWHSSAHILGETMENFYGGCLCYGPPI--ENGFYYDM 278

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/Swiss-Prot
Match: sp|P26639|SYTC_HUMAN (Threonine--tRNA ligase 1, cytoplasmic OS=Homo sapiens OX=9606 GN=TARS1 PE=1 SV=3)

HSP 1 Score: 120.939 bits (302), Expect = 1.166e-30
Identity = 59/136 (43.38%), Postives = 87/136 (63.97%), Query Frame = 0

Query:   60 IPKRISVFEGIQAEQQT---RRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYYTL 192
            I  R+ ++  ++AE  +    +    S PIKVTLPDGK  + + W+ T + +A  IS+ LA+N +I KVN V+WD++RPLEED  L++ KF+D+E +  +W+SSAHI+G  +E  Y   LC GP    E GFYY +
Sbjct:   54 IYTRLEMYNILKAEHDSILAEKAEKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPI--ENGFYYDM 187

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/Swiss-Prot
Match: sp|P87144|SYTC_SCHPO (Threonine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ths1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.852e-30
Identity = 60/140 (42.86%), Postives = 83/140 (59.29%), Query Frame = 0

Query:   56 LSATIP---KRISVFEGIQAEQQTRRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYYTL 192
            LS  IP    R+ +F+ +Q E +    +   + I +TLPDGKV +G  W+ T   +A  ISK LA+   +  VNG  WD+ RPLE    L++  F+D EG+  FW+SSAHILG   E  + C LCIGP T  +EGF+Y +
Sbjct:   16 LSLEIPFIQHRLDLFDKLQKEYKESLATKPREEIDITLPDGKVIKGTSWETTPISIAASISKGLADRVTVAIVNGEPWDLTRPLEASCTLKLCDFNDPEGKRVFWHSSAHILGEATELSFHCHLCIGPPT--DEGFFYEM 153

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q3ZBV8|SYTC_BOVIN (Threonine--tRNA ligase 1, cytoplasmic OS=Bos taurus OX=9913 GN=TARS1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.657e-30
Identity = 58/136 (42.65%), Postives = 86/136 (63.24%), Query Frame = 0

Query:   60 IPKRISVFEGIQAEQQT---RRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYYTL 192
            I  R+ ++  ++AE  +    +    S PIKVTLPDGK  + + W+ T + +A  IS+ LA+N +I KVN  +WD++RPLEED  L++ KF+D+E +  +W+SSAHI+G  +E  Y   LC GP    E GFYY +
Sbjct:   54 INTRLEMYNKLKAEHDSILAEKAEKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNKAVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPI--ENGFYYDM 187

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q5XHY5|SYTC_RAT (Threonine--tRNA ligase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.834e-30
Identity = 57/136 (41.91%), Postives = 87/136 (63.97%), Query Frame = 0

Query:   60 IPKRISVFEGIQAEQQT---RRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYYTL 192
            I  R+ ++  ++AE  +    + +  S PIKVTLPDGK  + + W+ T + +A  IS+ LA+N ++ KVN V+WD++RPLE D  L++ KF+D+E +  +W+SSAHI+G  +E  Y   LC GP    E GFYY +
Sbjct:   26 INTRLDMYHKLKAEHDSILAEKAAKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPI--ENGFYYDM 159

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9D0R2|SYTC_MOUSE (Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 4.393e-30
Identity = 57/136 (41.91%), Postives = 87/136 (63.97%), Query Frame = 0

Query:   60 IPKRISVFEGIQAEQQT---RRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYYTL 192
            I  R+ ++  ++AE  +    + +  S PIKVTLPDGK  + + W+ T + +A  IS+ LA+N ++ KVN V+WD++RPLE D  L++ KF+D+E +  +W+SSAHI+G  +E  Y   LC GP    E GFYY +
Sbjct:   53 INTRLDMYNKLKAEHDSILAEKAAKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPI--ENGFYYDM 186

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. Araport11
Match: AT5G26830.1 (| Threonyl-tRNA synthetase | Chr5:9437351-9441568 FORWARD LENGTH=709 | 201606)

HSP 1 Score: 214.927 bits (546), Expect = 8.361e-66
Identity = 101/152 (66.45%), Postives = 114/152 (75.00%), Query Frame = 0

Query:   39 FAATPAVVFVHAKDESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTLPDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYY 190
            F   P +   H KDE+YLSA IPKRI +FE IQA Q     SL  DPIKVTLPDG VKEGKKW+ T  D+A +ISK LAN+ALI  V+ VLWDMNRPLE D  L++FKFD D+GRDT W+SSAHILG  LE EY C+LCIGPCTTR EGFYY
Sbjct:   28 FCTVPTMAANHPKDEAYLSAVIPKRIKLFEQIQANQLENLKSLPHDPIKVTLPDGNVKEGKKWETTPMDIAAQISKGLANSALISAVDDVLWDMNRPLEGDCKLELFKFDSDKGRDTLWHSSAHILGQALEQEYGCQLCIGPCTTRGEGFYY 179

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. Araport11
Match: AT1G17960.1 (| Threonyl-tRNA synthetase | Chr1:6181015-6183737 REVERSE LENGTH=458 | 201606)

HSP 1 Score: 192.2 bits (487), Expect = 3.610e-59
Identity = 91/146 (62.33%), Postives = 110/146 (75.34%), Query Frame = 0

Query:   49 HAKDESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTL-PDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDDEGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYYTLL 193
            H KDE+YLS+ IPKRI +FE IQAEQ  +  S   DPIK+TL PDG  KEG++W+ +  D+A +ISK LA +AL+  VN VLWDMNRPLE D  L++F FD D+GR+TFW+SSAHILG  LE EY CKLCIGPC  R+EGFYY  L
Sbjct:    6 HPKDEAYLSSVIPKRIRLFEEIQAEQLEQLQSRPHDPIKITLLPDGIEKEGRRWETSPMDIAVQISKGLAKSALVSSVNHVLWDMNRPLEGDCSLEIFGFDSDQGRNTFWHSSAHILGQALEQEYGCKLCIGPCEPRDEGFYYDSL 151

[Close]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. Araport11
Match: AT1G17960.2 (| Threonyl-tRNA synthetase | Chr1:6181015-6183737 REVERSE LENGTH=385 | 201606)

HSP 1 Score: 111.694 bits (278), Expect = 4.132e-29
Identity = 55/91 (60.44%), Postives = 68/91 (74.73%), Query Frame = 0

Query:   49 HAKDESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTL-PDGKVKEGKKWQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEE 138
            H KDE+YLS+ IPKRI +FE IQAEQ  +  S   DPIK+TL PDG  KEG++W+ +  D+A +ISK LA +AL+  VN VLWDMNRPLEE
Sbjct:    6 HPKDEAYLSSVIPKRIRLFEEIQAEQLEQLQSRPHDPIKITLLPDGIEKEGRRWETSPMDIAVQISKGLAKSALVSSVNHVLWDMNRPLEE 96

The following BLAST results are available for this feature:

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/TrEMBL
BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/Swiss-Prot
BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. Araport11

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|G7K2Q8\|G7K2Q8_MEDTR	1.534e-82	82.12	Threonyl-tRNA synthetase OS=Medicago truncatula OX...	[more]
tr\|A0A392QHD1\|A0A392QHD1_9FABA	2.080e-81	82.39	Threonine--tRNA ligase mitochondrial-like (Fragmen...	[more]
tr\|A0A2K3JP18\|A0A2K3JP18_TRIPR	2.551e-81	81.63	Threonine-tRNA ligase mitochondrial-like (Fragment...	[more]
tr\|A0A1S2XK38\|A0A1S2XK38_CICAR	6.526e-80	84.14	Threonyl-tRNA synthetase OS=Cicer arietinum OX=382...	[more]
tr\|A0A2Z6MYJ2\|A0A2Z6MYJ2_TRISU	3.370e-79	76.97	Threonyl-tRNA synthetase OS=Trifolium subterraneum...	[more]
tr\|A0A0L9USY8\|A0A0L9USY8_PHAAN	3.943e-75	76.32	Threonyl-tRNA synthetase OS=Phaseolus angularis OX...	[more]
tr\|V7CJK2\|V7CJK2_PHAVU	4.749e-75	76.32	Threonyl-tRNA synthetase OS=Phaseolus vulgaris OX=...	[more]
tr\|A0A1S3VYW3\|A0A1S3VYW3_VIGRR	5.743e-75	76.32	Threonyl-tRNA synthetase OS=Vigna radiata var. rad...	[more]
tr\|A0A0S3T3W6\|A0A0S3T3W6_PHAAN	6.450e-75	76.32	Threonyl-tRNA synthetase OS=Vigna angularis var. a...	[more]
tr\|A0A4D6LQ17\|A0A4D6LQ17_VIGUN	1.113e-74	76.32	Threonyl-tRNA synthetase OS=Vigna unguiculata OX=3...	[more]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
sp\|O04630\|SYTM1_ARATH	8.172e-65	66.45	Threonine--tRNA ligase, mitochondrial 1 OS=Arabido...	[more]
sp\|Q8GZ45\|SYTC_ARATH	3.528e-58	62.33	Probable threonine--tRNA ligase, cytoplasmic OS=Ar...	[more]
sp\|P52709\|SYTC_CAEEL	1.974e-36	45.39	Threonine--tRNA ligase, cytoplasmic OS=Caenorhabdi...	[more]
sp\|Q54J66\|SYTC1_DICDI	7.461e-34	47.76	Probable threonine--tRNA ligase 1, cytoplasmic OS=...	[more]
sp\|Q0V9S0\|SYTC2_XENTR	3.576e-31	42.18	Threonine--tRNA ligase 2, cytoplasmic OS=Xenopus t...	[more]
sp\|P26639\|SYTC_HUMAN	1.166e-30	43.38	Threonine--tRNA ligase 1, cytoplasmic OS=Homo sapi...	[more]
sp\|P87144\|SYTC_SCHPO	1.852e-30	42.86	Threonine--tRNA ligase, cytoplasmic OS=Schizosacch...	[more]
sp\|Q3ZBV8\|SYTC_BOVIN	2.657e-30	42.65	Threonine--tRNA ligase 1, cytoplasmic OS=Bos tauru...	[more]
sp\|Q5XHY5\|SYTC_RAT	3.834e-30	41.91	Threonine--tRNA ligase 1, cytoplasmic OS=Rattus no...	[more]
sp\|Q9D0R2\|SYTC_MOUSE	4.393e-30	41.91	Threonine--tRNA ligase 1, cytoplasmic OS=Mus muscu...	[more]

BLAST of Vfaba.Tiffany.R1.1g104600.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G26830.1	8.361e-66	66.45	\| Threonyl-tRNA synthetase \| Chr5:9437351-9441568 ...	[more]
AT1G17960.1	3.610e-59	62.33	\| Threonyl-tRNA synthetase \| Chr1:6181015-6183737 ...	[more]
AT1G17960.2	4.132e-29	60.44	\| Threonyl-tRNA synthetase \| Chr1:6181015-6183737 ...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.980.10		coord: 150..193 e-value: 9.6E-9 score: 37.8
None	No IPR available	PANTHER	PTHR11451	THREONINE-TRNA LIGASE	coord: 56..192
None	No IPR available	CDD	cd01667	TGS_ThrRS	coord: 86..151 e-value: 4.92913E-25 score: 90.6249
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 84..144 e-value: 2.7E-24 score: 87.1
IPR004095	TGS	PFAM	PF02824	TGS	coord: 86..145 e-value: 3.7E-12 score: 46.1
IPR004095	TGS	PROSITE	PS51880	TGS	coord: 84..146 score: 17.293373
IPR012676	TGS-like	SUPERFAMILY	81271	TGS-like	coord: 86..146
IPR018163	Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily	SUPERFAMILY	55186	ThrRS/AlaRS common domain	coord: 148..191

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr1S:914078183..914080032-

mRNA sequence

>Vfaba.Tiffany.R1.1g104600.1_tif_v1 ID=Vfaba.Tiffany.R1.1g104600.1_tif_v1; Name=Vfaba.Tiffany.R1.1g104600.1; organism=Vicia faba; type=mRNA; length=585bp
ATGTTTTTTTCCAAGAAATTGAAGAGATTAGAAGGAAGATTGAACAAAAG
GGTTGTACAAGAAGTTAGAAGGAGATTGAAGAATAGTAATTGTTTCTATT
CCTCTCCCACCGTCTTCGCCGCCACACCTGCCGTCGTGTTTGTTCACGCT
AAGGATGAATCCTACCTAAGCGCAACCATCCCAAAACGCATCAGTGTATT
CGAGGGGATTCAGGCGGAGCAACAGACTCGCCGCCTATCACTGTCATCAG
ATCCGATCAAGGTAACGCTCCCCGACGGAAAAGTGAAGGAAGGAAAGAAA
TGGCAGAAAACTCTGTTTGATGTGGCTCGTGAAATCTCTAAGAATTTGGC
CAATAATGCTCTTATTTATAAGGTTAACGGTGTGCTATGGGATATGAATC
GTCCTCTTGAAGAGGATTCGTTGCTTCAGATGTTTAAGTTTGATGATGAT
GAAGGACGTGACACTTTCTGGAATTCTAGTGCTCACATTCTTGGACATCC
TCTTGAGACAGAGTATGAATGCAAGCTCTGCATTGGACCTTGTACTACCA
GAGAAGAGGGTTTCTACTATACGCTTTTACGGTGA

protein sequence of Vfaba.Tiffany.R1.1g104600.1_tif_v1

>Vfaba.Tiffany.R1.1g104600.1_tif_v1 ID=Vfaba.Tiffany.R1.1g104600.1_tif_v1; Name=Vfaba.Tiffany.R1.1g104600.1_tif_v1; organism=Vicia faba; type=polypeptide; length=194bp
MFFSKKLKRLEGRLNKRVVQEVRRRLKNSNCFYSSPTVFAATPAVVFVHA
KDESYLSATIPKRISVFEGIQAEQQTRRLSLSSDPIKVTLPDGKVKEGKK
WQKTLFDVAREISKNLANNALIYKVNGVLWDMNRPLEEDSLLQMFKFDDD
EGRDTFWNSSAHILGHPLETEYECKLCIGPCTTREEGFYYTLLR

mRNA from alignment at chr1S:914078183..914080032-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Vfaba.Tiffany.R1.1g104600.1_tif_v1 ID=Vfaba.Tiffany.R1.1g104600.1_tif_v1; Name=Vfaba.Tiffany.R1.1g104600.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1S:914078183..914080032- (Vicia faba

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR012675	Beta-grasp_dom_sf
IPR004095	TGS
IPR012676	TGS-like
IPR018163	Thr/Ala-tRNA-synth_IIc_edit

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding

Search form

Vfaba.Tiffany.R1.1g104600.1