Vfaba.Tiffany.R1.2g149000.1

Transcript Overview
NameVfaba.Tiffany.R1.2g149000.1
Unique NameVfaba.Tiffany.R1.2g149000.1_tif_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length474
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr2chromosomechr2:1177621567..1177622040 -Vicia faba cv. Tiffany genome v1.0n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.2g149000Vfaba.Tiffany.R1.2g149000_tif_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.2g149000.1_tif_v1-exonVfaba.Tiffany.R1.2g149000.1_tif_v1-exon-chr2_tif_v1:1177621567..1177622040Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.2g149000.1_tif_v1-cdsVfaba.Tiffany.R1.2g149000.1_tif_v1-cds-chr2_tif_v1:1177621567..1177622040Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.2g149000.1_tif_v1Vfaba.Tiffany.R1.2g149000.1_tif_v1Vicia fabapolypeptide
Vfaba.Tiffany.R1.2g149000.1_tif_v1Vfaba.Tiffany.R1.2g149000.1_tif_v1-proteinVicia fabapolypeptide


Homology
The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.2g149000.1 vs.
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Tiffany.R1.2g149000.1 vs.
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Tiffany.R1.2g149000.1 vs.
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Tiffany.R1.2g149000.1_tif_v1 ID=Vfaba.Tiffany.R1.2g149000.1_tif_v1; Name=Vfaba.Tiffany.R1.2g149000.1; organism=Vicia faba; type=mRNA; length=474bp
ATGTTGGCACCTGATATTTTTAGCTCTGCTTGGTATCGGTTTTGCCACCA
TGTTTTGTCGTTTCAATTTCATCACAGCAGTCTGTACCAAAGTTCGTCCA
GAGTGGTTGGTGTTTACCATATTTTTCGCGTATTTGAACTACGTTCTATA
CACGATGTTTGTGTTGAGGTTTTAGTCAAGGGGCACGTTGAAGATCGAGT
TTCCGTGATATTGTTATCTTGGTTACTATTGGCAGTTAAGAGTTATATGA
GGCCATTTGTTTTCACTAGGGTTTTGGCCATGGCAGCAAACTATAATAGT
TCTGTCATGACAGTCCTTTTCTTTTGGGAAGGATTGTTTTTTCCACCAAA
GCTCTGGATTTTTTCATCTCTTGGCTTCATATATTCTGAACTTCTCATTG
TAACTTCTTTATTGTATTATGTAATAATTCTCCAATTTGCCCTTTGTACT
GAAATGTTAGTTTTATATTTATGA
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protein sequence of Vfaba.Tiffany.R1.2g149000.1_tif_v1

>Vfaba.Tiffany.R1.2g149000.1_tif_v1 ID=Vfaba.Tiffany.R1.2g149000.1_tif_v1; Name=Vfaba.Tiffany.R1.2g149000.1_tif_v1; organism=Vicia faba; type=polypeptide; length=157bp
MLAPDIFSSAWYRFCHHVLSFQFHHSSLYQSSSRVVGVYHIFRVFELRSI
HDVCVEVLVKGHVEDRVSVILLSWLLLAVKSYMRPFVFTRVLAMAANYNS
SVMTVLFFWEGLFFPPKLWIFSSLGFIYSELLIVTSLLYYVIILQFALCT
EMLVLYL
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mRNA from alignment at chr2:1177621567..1177622040-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Tiffany.R1.2g149000.1_tif_v1 ID=Vfaba.Tiffany.R1.2g149000.1_tif_v1; Name=Vfaba.Tiffany.R1.2g149000.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:1177621567..1177622040- (Vicia faba
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