Vigst.05G106000.01

Transcript Overview
NameVigst.05G106000.01
Unique NamedrVigStip.JP252948.2.0.Vigst.05G106000.01
TypemRNA
OrganismVigna stipulacea ()
Sequence length354
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr05chromosomeChr05:8883515..8887538 +Vigna stipulacea acc. JP252948 genome v2.a1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vstvvaR548Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvvaR589Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvstL118Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvstL333Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvstL0484Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0770Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0930Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carvstL240Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvstL250Pisum sativum Cameor genome v1aPisum sativum
psvstL252Pisum sativum Cameor genome v1aPisum sativum
carvstL347Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvstL639Pisum sativum Cameor genome v1aPisum sativum
pvvstL627Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vssvstL102Vicia sativa cv. Studenica genome v1.0Vicia sativa
vstvstR286Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstL449Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvstL663Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vssvstL623Vicia sativa cv. Studenica genome v1.0Vicia sativa
vstvuR426Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vstvuR432Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vstvumR428Vigna umbellata FF25 genome v1.0Vigna umbellata
vstvumR433Vigna umbellata FF25 genome v1.0Vigna umbellata
vstvumR450Vigna umbellata FF25 genome v1.0Vigna umbellata
vasvstL458Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvstL624Vigna angularis cv. Shumari genome v1.a1Vigna angularis

Orthologs
Gene/TranscriptAssemblySpecies
jg30801.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.5g187760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
XM_058882719.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Phvul.006G106600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun06g117600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigan.05G133300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vum_Contig3G00034.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat3g006080.1Pisum sativum Cameor genome v1aPisum sativum
evm.Ca_v2.0_08291Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Va09G048500.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigst.05G106000drVigStip.JP252948.2.0.Vigst.05G106000Vigna stipulaceagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
nbis-exon-72623drVigStip.JP252948.2.0.nbis-exon-72623Vigna stipulaceaexon
nbis-exon-72624drVigStip.JP252948.2.0.nbis-exon-72624Vigna stipulaceaexon
nbis-exon-72625drVigStip.JP252948.2.0.nbis-exon-72625Vigna stipulaceaexon
nbis-exon-72626drVigStip.JP252948.2.0.nbis-exon-72626Vigna stipulaceaexon
nbis-exon-72627drVigStip.JP252948.2.0.nbis-exon-72627Vigna stipulaceaexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
five_prime_utr-11288drVigStip.JP252948.2.0.five_prime_utr-11288Vigna stipulaceafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-70116drVigStip.JP252948.2.0.cds-70116Vigna stipulaceaCDS
cds-70117drVigStip.JP252948.2.0.cds-70117Vigna stipulaceaCDS
cds-70118drVigStip.JP252948.2.0.cds-70118Vigna stipulaceaCDS
cds-70119drVigStip.JP252948.2.0.cds-70119Vigna stipulaceaCDS
cds-70120drVigStip.JP252948.2.0.cds-70120Vigna stipulaceaCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
three_prime_utr-10638drVigStip.JP252948.2.0.three_prime_utr-10638Vigna stipulaceathree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigStip.JP252948.2.0.Vigst.05G106000.01drVigStip.JP252948.2.0.Vigst.05G106000.01Vigna stipulaceapolypeptide
drVigStip.JP252948.2.0.Vigst.05G106000.01drVigStip.JP252948.2.0.Vigst.05G106000.01-proteinVigna stipulaceapolypeptide


Homology
[Close]
BLAST of Vigst.05G106000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3S511|A0A0S3S511_PHAAN (c-Myc-binding protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G133300 PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 2.852e-79
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 
Query:    1 MMMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKDGL 117
            MMMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKDGL
Sbjct:    1 MMMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKDGL 117
[Close]
BLAST of Vigst.05G106000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0K6D3|A0A8T0K6D3_PHAAN (c-Myc-binding protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0073370 PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 2.852e-79
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 
Query:    1 MMMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKDGL 117
            MMMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKDGL
Sbjct:    1 MMMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKDGL 117
[Close]
BLAST of Vigst.05G106000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TCE0|A0A1S3TCE0_VIGRR (c-Myc-binding protein homolog OS=Vigna radiata var. radiata OX=3916 GN=LOC106754010 PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 2.852e-79
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 
Query:    1 MMMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKDGL 117
            MMMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKDGL
Sbjct:    1 MMMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKDGL 117
[Close]
BLAST of Vigst.05G106000.01 vs. ExPASy TrEMBL (2024)
Match: tr|V7BMQ1|V7BMQ1_PHAVU (c-Myc-binding protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G106600g PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 6.901e-77
Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 0 
Query:    1 MMMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKDGL 117
            MMMRYKEEKEAKKE FRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSI EYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTD+ESPKDGL
Sbjct:    1 MMMRYKEEKEAKKEGFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSIPEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDSESPKDGL 117
[Close]
BLAST of Vigst.05G106000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445LGX2|A0A445LGX2_GLYSO (c-Myc-binding protein-like isoform A OS=Glycine soja OX=3848 GN=D0Y65_008196 PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.779e-65
Identity = 108/116 (93.10%), Postives = 114/116 (98.28%), Query Frame = 0 
Query:    2 MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKDGL 117
            MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLV+LYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYN+LLAAHQ+TCKELEE+K+SH LAT STKETTD+ESPKDGL
Sbjct:    1 MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVSLYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNDLLAAHQKTCKELEEMKNSHALATASTKETTDSESPKDGL 116
[Close]
BLAST of Vigst.05G106000.01 vs. ExPASy TrEMBL (2024)
Match: tr|I1JRT8|I1JRT8_SOYBN (c-Myc-binding protein OS=Glycine max OX=3847 GN=100810209 PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.779e-65
Identity = 108/116 (93.10%), Postives = 114/116 (98.28%), Query Frame = 0 
Query:    2 MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKDGL 117
            MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLV+LYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYN+LLAAHQ+TCKELEE+K+SH LAT STKETTD+ESPKDGL
Sbjct:    1 MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVSLYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNDLLAAHQKTCKELEEMKNSHALATASTKETTDSESPKDGL 116
[Close]
BLAST of Vigst.05G106000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8L956|A0A8B8L956_ABRPR (c-Myc-binding protein homolog OS=Abrus precatorius OX=3816 GN=LOC113863460 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.889e-63
Identity = 104/116 (89.66%), Postives = 113/116 (97.41%), Query Frame = 0 
Query:    2 MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKDGL 117
            MMRYKEEKEAKKEAFRKYLE+SGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISE+EKLQAEFSDLQ KYNELLAAH++TCKELEE+++SH L+T STKETTD+ESPKDGL
Sbjct:    1 MMRYKEEKEAKKEAFRKYLESSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEFEKLQAEFSDLQFKYNELLAAHRKTCKELEEMRNSHALSTASTKETTDSESPKDGL 116
[Close]
BLAST of Vigst.05G106000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TY00|A0A151TY00_CAJCA (c-Myc-binding protein isogeny OS=Cajanus cajan OX=3821 GN=KK1_011121 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.350e-62
Identity = 102/117 (87.18%), Postives = 111/117 (94.87%), Query Frame = 0 
Query:    1 MMMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKDGL 117
            MMMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSA++FIQQKLSCPSI+EY+K QAEFSDLQI+YN+LLAAH +TCKELEE+K+S  L T STKETTDNESPKDGL
Sbjct:    1 MMMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSALDFIQQKLSCPSIAEYDKFQAEFSDLQIRYNDLLAAHHKTCKELEEMKNSQALVTASTKETTDNESPKDGL 117
[Close]
BLAST of Vigst.05G106000.01 vs. ExPASy TrEMBL (2024)
Match: tr|C6TKL6|C6TKL6_SOYBN (c-Myc-binding protein homolog OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.502e-61
Identity = 104/116 (89.66%), Postives = 110/116 (94.83%), Query Frame = 0 
Query:    2 MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKDGL 117
            MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLV+LYEQNDKP  AVEFIQQKLSCPSISEYEKLQAEFSDLQIKYN+LLAAHQ+TCKELEE+K+SH LAT  TKETTD+E PKDGL
Sbjct:    1 MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVSLYEQNDKPFFAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNDLLAAHQKTCKELEEMKNSHALATAFTKETTDSEFPKDGL 116
[Close]
BLAST of Vigst.05G106000.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4XP68|A0A9D4XP68_PEA (c-Myc-binding protein homolog OS=Pisum sativum OX=3888 GN=KIW84_030264 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 6.720e-60
Identity = 91/107 (85.05%), Postives = 100/107 (93.46%), Query Frame = 0 
Query:    7 EEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESP 113
            +EKEAKKE+FRKYLE+SGAVDALTKVLVALYEQNDKPSSA+EFIQQKLSCPSI EYEKLQA+FSDLQI+YN+LL  H+ TCKELEE+KSSHVL   STKETTDNESP
Sbjct:   63 QEKEAKKESFRKYLESSGAVDALTKVLVALYEQNDKPSSALEFIQQKLSCPSIPEYEKLQAQFSDLQIRYNDLLTTHRNTCKELEEMKSSHVLGMASTKETTDNESP 169
[Close]
BLAST of Vigst.05G106000.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q54I57|MYCBP_DICDI (c-Myc-binding protein homolog OS=Dictyostelium discoideum OX=44689 GN=mycbp PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.986e-15
Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 0 
Query:   11 AKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELE 91
            A+KE F+ YLE SG +DALTKVLV LYE++DKPS A+EFI++ L      + + L+ E +DL+ + + L        K+LE
Sbjct:    5 AEKEEFKGYLEKSGVIDALTKVLVGLYEESDKPSDALEFIKKHLGNSLGIDVDALKQENADLKAEVSALTQRVDDLSKKLE 85
[Close]
BLAST of Vigst.05G106000.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9EQS3|MYCBP_MOUSE (c-Myc-binding protein OS=Mus musculus OX=10090 GN=Mycbp PE=1 SV=5)

HSP 1 Score: 68.1662 bits (165), Expect = 7.338e-15
Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 0 
Query:    2 MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSC--PSISEYEKLQAEFSDLQIKY 76
            M  YK   ++K+E FR+YLE SG +D LTKVLVALYE+ +KP+SA++F++  L    P   E E L+ E ++++ KY
Sbjct:    1 MAHYKA-ADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPTSALDFLKHHLGAATPENPEIELLRLELAEMKEKY 76
[Close]
BLAST of Vigst.05G106000.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q2TBP7|MYCBP_BOVIN (c-Myc-binding protein OS=Bos taurus OX=9913 GN=MYCBP PE=3 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 9.412e-15
Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 0 
Query:    2 MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSC--PSISEYEKLQAEFSDLQIKY 76
            M  YK   ++K+E FR+YLE SG +D LTKVLVALYE+ +KP+SA++F++  L    P   E E L+ E ++++ KY
Sbjct:    1 MAHYKA-ADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPNSALDFLKHHLGAATPENPEIELLRLELAEMKEKY 76
[Close]
BLAST of Vigst.05G106000.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q99417|MYCBP_HUMAN (c-Myc-binding protein OS=Homo sapiens OX=9606 GN=MYCBP PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 1.015e-14
Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 0 
Query:    2 MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSC--PSISEYEKLQAEFSDLQIKY 76
            M  YK   ++K+E FR+YLE SG +D LTKVLVALYE+ +KP+SA++F++  L    P   E E L+ E ++++ KY
Sbjct:    1 MAHYKA-ADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPNSALDFLKHHLGAATPENPEIELLRLELAEMKEKY 76
[Close]
BLAST of Vigst.05G106000.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5R7A8|MYCBP_PONAB (c-Myc-binding protein OS=Pongo abelii OX=9601 GN=MYCBP PE=3 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 1.072e-14
Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 0 
Query:    2 MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSC--PSISEYEKLQAEFSDLQIKY 76
            M  YK   ++K+E FR+YLE SG +D LTKVLVALYE+ +KP+SA++F++  L    P   E E L+ E ++++ KY
Sbjct:    1 MAHYKA-ADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPNSALDFLKHHLGAATPENPEIELLRLELAEIKEKY 76
[Close]
BLAST of Vigst.05G106000.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:5907133-5908154 FORWARD LENGTH=122)

HSP 1 Score: 144.05 bits (362), Expect = 1.355e-45
Identity = 80/111 (72.07%), Postives = 93/111 (83.78%), Query Frame = 0 
Query:    2 MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNES 112
            MMRYKEEKE KKEAFRKYLE+SG +D+LTKVLV+LYEQNDKPSSA+EFIQQKL  PS+S+YEKLQAE SDLQIKYNELLA HQ T +EL  +KS H  +  S+K+  D E+
Sbjct:    1 MMRYKEEKEVKKEAFRKYLESSGVLDSLTKVLVSLYEQNDKPSSALEFIQQKLGGPSVSDYEKLQAEKSDLQIKYNELLAKHQETLRELNGVKSLH--SRNSSKDDADRET 109
[Close]
BLAST of Vigst.05G106000.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:5907133-5908154 FORWARD LENGTH=122)

HSP 1 Score: 144.05 bits (362), Expect = 1.355e-45
Identity = 80/111 (72.07%), Postives = 93/111 (83.78%), Query Frame = 0 
Query:    2 MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNES 112
            MMRYKEEKE KKEAFRKYLE+SG +D+LTKVLV+LYEQNDKPSSA+EFIQQKL  PS+S+YEKLQAE SDLQIKYNELLA HQ T +EL  +KS H  +  S+K+  D E+
Sbjct:    1 MMRYKEEKEVKKEAFRKYLESSGVLDSLTKVLVSLYEQNDKPSSALEFIQQKLGGPSVSDYEKLQAEKSDLQIKYNELLAKHQETLRELNGVKSLH--SRNSSKDDADRET 109
[Close]
BLAST of Vigst.05G106000.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:5907133-5908154 FORWARD LENGTH=122)

HSP 1 Score: 144.05 bits (362), Expect = 1.355e-45
Identity = 80/111 (72.07%), Postives = 93/111 (83.78%), Query Frame = 0 
Query:    2 MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNES 112
            MMRYKEEKE KKEAFRKYLE+SG +D+LTKVLV+LYEQNDKPSSA+EFIQQKL  PS+S+YEKLQAE SDLQIKYNELLA HQ T +EL  +KS H  +  S+K+  D E+
Sbjct:    1 MMRYKEEKEVKKEAFRKYLESSGVLDSLTKVLVSLYEQNDKPSSALEFIQQKLGGPSVSDYEKLQAEKSDLQIKYNELLAKHQETLRELNGVKSLH--SRNSSKDDADRET 109
[Close]
BLAST of Vigst.05G106000.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:5907133-5908274 FORWARD LENGTH=91)

HSP 1 Score: 111.309 bits (277), Expect = 5.699e-33
Identity = 61/73 (83.56%), Postives = 68/73 (93.15%), Query Frame = 0 
Query:    2 MMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQI 74
            MMRYKEEKE KKEAFRKYLE+SG +D+LTKVLV+LYEQNDKPSSA+EFIQQKL  PS+S+YEKLQAE SDLQI
Sbjct:    1 MMRYKEEKEVKKEAFRKYLESSGVLDSLTKVLVSLYEQNDKPSSALEFIQQKLGGPSVSDYEKLQAEKSDLQI 73
The following BLAST results are available for this feature:
BLAST of Vigst.05G106000.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3S511|A0A0S3S511_PHAAN2.852e-79100.00c-Myc-binding protein OS=Vigna angularis var. angu... [more]
tr|A0A8T0K6D3|A0A8T0K6D3_PHAAN2.852e-79100.00c-Myc-binding protein OS=Phaseolus angularis OX=39... [more]
tr|A0A1S3TCE0|A0A1S3TCE0_VIGRR2.852e-79100.00c-Myc-binding protein homolog OS=Vigna radiata var... [more]
tr|V7BMQ1|V7BMQ1_PHAVU6.901e-7797.44c-Myc-binding protein OS=Phaseolus vulgaris OX=388... [more]
tr|A0A445LGX2|A0A445LGX2_GLYSO1.779e-6593.10c-Myc-binding protein-like isoform A OS=Glycine so... [more]
tr|I1JRT8|I1JRT8_SOYBN1.779e-6593.10c-Myc-binding protein OS=Glycine max OX=3847 GN=10... [more]
tr|A0A8B8L956|A0A8B8L956_ABRPR3.889e-6389.66c-Myc-binding protein homolog OS=Abrus precatorius... [more]
tr|A0A151TY00|A0A151TY00_CAJCA2.350e-6287.18c-Myc-binding protein isogeny OS=Cajanus cajan OX=... [more]
tr|C6TKL6|C6TKL6_SOYBN1.502e-6189.66c-Myc-binding protein homolog OS=Glycine max OX=38... [more]
tr|A0A9D4XP68|A0A9D4XP68_PEA6.720e-6085.05c-Myc-binding protein homolog OS=Pisum sativum OX=... [more]
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BLAST of Vigst.05G106000.01 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q54I57|MYCBP_DICDI3.986e-1545.68c-Myc-binding protein homolog OS=Dictyostelium dis... [more]
sp|Q9EQS3|MYCBP_MOUSE7.338e-1546.75c-Myc-binding protein OS=Mus musculus OX=10090 GN=... [more]
sp|Q2TBP7|MYCBP_BOVIN9.412e-1546.75c-Myc-binding protein OS=Bos taurus OX=9913 GN=MYC... [more]
sp|Q99417|MYCBP_HUMAN1.015e-1446.75c-Myc-binding protein OS=Homo sapiens OX=9606 GN=M... [more]
sp|Q5R7A8|MYCBP_PONAB1.072e-1446.75c-Myc-binding protein OS=Pongo abelii OX=9601 GN=M... [more]
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BLAST of Vigst.05G106000.01 vs. Araport11
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs arabidopsis Araport11)
Total hits: 4
Match NameE-valueIdentityDescription
|1.355e-4572.07Symbols: no symbol available | no full name availa... [more]
|1.355e-4572.07Symbols: no symbol available | no full name availa... [more]
|1.355e-4572.07Symbols: no symbol available | no full name availa... [more]
|5.699e-3383.56Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna stipulacea acc. JP252948 genome v1.0
Date Performed: 2024-08-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR02028CMYCBINDINGPcoord: 10..20
score: 68.91
coord: 20..34
score: 64.15
coord: 34..48
score: 54.98
IPR026060Associate of Myc 1PANTHERPTHR13168ASSOCIATE OF C-MYC AMY-1coord: 2..108

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigStip.JP252948.2.0.Vigst.05G106000.01 ID=drVigStip.JP252948.2.0.Vigst.05G106000.01; Name=Vigst.05G106000.01; organism=Vigna stipulacea; type=mRNA; length=354bp
ATGATGATGCGATACAAAGAGGAAAAAGAAGCGAAGAAGGAAGCTTTTAG
AAAATATCTGGAAACGAGTGGAGCTGTGGATGCTCTAACCAAAGTTCTCG
TTGCTTTGTACGAGCAAAACGACAAGCCTTCTTCTGCCGTTGAGTTCATT
CAACAGAAGCTGAGCTGTCCTTCCATCTCCGAGTATGAAAAATTGCAGGC
CGAATTCTCCGATCTGCAAATCAAATACAACGAGCTGTTGGCTGCGCACC
AGAGAACCTGCAAAGAGTTAGAAGAAATCAAAAGCTCACATGTCTTGGCA
ACGGTATCTACGAAAGAAACAACTGACAATGAATCTCCGAAAGATGGGCT
CTAA
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protein sequence of drVigStip.JP252948.2.0.Vigst.05G106000.01

>drVigStip.JP252948.2.0.Vigst.05G106000.01 ID=drVigStip.JP252948.2.0.Vigst.05G106000.01; Name=drVigStip.JP252948.2.0.Vigst.05G106000.01; organism=Vigna stipulacea; type=polypeptide; length=118bp
MMMRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFI
QQKLSCPSISEYEKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLA
TVSTKETTDNESPKDGL*
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mRNA from alignment at Chr05:8883515..8887538+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigStip.JP252948.2.0.Vigst.05G106000.01 ID=drVigStip.JP252948.2.0.Vigst.05G106000.01; Name=Vigst.05G106000.01; organism=Vigna stipulacea; type=mRNA; length=4024bp; location=Sequence derived from: Chr05:8883515..8887538+ (Vigna stipulacea
AAAGAGTGGACGCAGATCGGGTGAGTGCCAAAGCAAAGAATAGAATCATT
GGGTGTCGATCCAAACAGATGATGATGCGATACAAAGAGGTTCCAATTTC
ATCATGTTCTTTCTCTCGCTTAATCAAAATCAATATGAATGAATCTCACA
CTGTAATCGTTATAATCAATTGATTTTGTAGGAAAAAGAAGCGAAGAAGG
AAGCTTTTAGAAAATATCTGGAAACGAGTGGAGCTGTGGATGCTCTAACC
AAAGGTTTCTTTCCCATTCACACGTTCCTCTCTGCATTTTTCAAACTAAT
TGTTCTGTTAATTAACAATTCTTGTTTCTTTCTCTGTTCCCGATTTGGCG
TTGTTGAAGTTCTCGTTGCTTTGTACGAGCAAAACGACAAGCCTTCTTCT
GCCGTTGAGTATGTTCACTTCTTCACTTCCCATTCTCATTTGTTTCTCTA
CACGTGTGACACACACGTTTCTCTTCGCAGGTTCATTCAACAGAAGCTGA
GCTGTCCTTCCATCTCCGAGTATGAAAAATTGCAGGCCGAATTCTCCGAT
CTGCAAATCAAATACAACGAGCTGTTGGCTGCGCACCAGAGAACCTGCAA
AGAGGTTTATTATTATTATTATATTATTATTATTATTATTATCATTATTA
TTATTATGTAATATATCTACGTTTAACGAAGTGTAATTAATAATTAATTA
CACAATGCTAGTAAGTTAATCGGTAAATATGTTAAAATGTAGTCTGTGAT
AAGTTGATTAGTGGGTTTGAACAAAAATTGAAATATTATTATAAGGGAGA
AGATGAGTTCATTTTACGACTTTATTTCCTTTTTCTTTTAGTATTTACTG
AGAAGTCTATCCAGCCACAGTTATACTTAGAATGTACAGGGTTGTAGATG
TTAGGATTCATGATGGCAGGTGAAATGGATAATTTACTGTGTATAAAGCA
TGTGATAAAAAAAGTGGAACTCTTGATTAGCAACAAGAATATGGACTTGA
AATGTTGGTTATGATGGATAATAATGTCTTGTGTGGTTAGGGAACTCGGT
TATTTTAGGTTAATGTAGGAGATAAAGTAAGGGGAAAAAGGATTGGAGAA
GAGCTATGGACCTGTATAGAAGGGATGGAGGTCGGGGACTGGTAAAAGAG
AACAAAGCTCCTCTTGTGGATAAGATTGTTTTACATGAAAGTTAAAACCA
ATTTTGACCATCCACTTTGACTGAATGATCAACAGTAACAGCTCCTCTCG
GGCACGCAATTGTAATAATTTCTGTATATATGGACAATTAGTATTAGAAG
TTACTTATAATAGCATGACTTTGAAGAAGTTACGTGATTTTTGTGTCTTG
TTCTTACTATTTTTAATAAGATTTAATTATCAATATGTATTCATTTCATT
CTGAGCATAAAAAAGGCCCTCTCTCTTTATACTCTTTCATACGTATGCTG
GCAGAACTGTGCATGCACATACTGGTGTTAAACTCAGAGCATGAGGCAAA
ACTTTGCCTTCTTCTGCTGTCGAAATCTCATACAAATACAATTTAATTAT
AAGTTGTCAATCTGATTTTCAGCCCAGTAAATTTGCTAAATTGCTGTATA
TACAAGCTAACATATTATTCTATTAAGAGATGAGAATAATAGGTATAAAT
ACAAATACATGTACAATCCCATATATTAGCTTTTGTCCATTAATGCTATT
TACACCCCCTCAAATTGGTGTTTGTGGATTCACAAGCATCAATGATACTA
AATCCTATGTTTGAGCTTCGTCTAAGGCAAGAAGTTCAGTCTCAACAGCC
TTTAACCAACATTCATTCTCCATGGCCTGTTGATGAGAAGGAATAAGAAT
GTTTGATAATTTTGCTGTCAAGGAATTTATAATACCCATTTGTGGGCTTA
GGAACATGCAAACTGTGTCAAAATGGAGATGGATCTGGTTCCTGTACTGG
GTCAGCAGCCAAGGAATTATTTTTAGGAGCCCCATGGGATTTTATTTCCT
GATTTTGAGTCGCAACACTTCGTCTTTAGTTGACAAAGCAAGGTTTAGAT
GATGATTTACCTGCCAAAAAGTTAGAAAACAATGGAAAAATAGAAATTGG
AGAGAGTCATGATGTGTTGCAAAAAAAAAATGTATTTTCTTGGAAGATGC
CATTTCTAAAGACCTGAATCCAGCTAAGGTTAGGATCATGACATAGAAAG
CTCTTTTGGTAAGGAGAATACCCAAGAAACACAGTCAACAACAGATTGTG
TTGTCAGTTTGGTGCATGATGTCCAAACTTCTTGCAGCAAAAACATTGAA
CAACCCTCACGTCGGGACTTCTTCACTTCCCTTCTGCCATGCATGCTACT
GGGACAACAACTTGTTTATGTTCTTCAAGGATGGACTATGTAAGAAGACA
TTGTTCTTCACGTAACATATCATTGAGACATGCATCCAATGGCGACGGGA
TCGGATACCTTGAAGGTCAGATCACAATTTCAAAAGGAAATTGATGTTGT
TTAGTAGTTTCATGAATTGCTTAGACTGAACTTAAGACTATGAGATGTCA
AGTTTTCATAACTTATATCAGTATATCCAGCCCAAAGATTTGTGAATTGA
GAGTAAAAATTACACATGGAGAGACTGTATTGATTAAAGATAGCTATGTG
ATATTCAAGCTGGAATCATCGAGCTGCATTGGTTTCATTATAGTCTTTCT
TCAAGTGTCCTCATTGTTGTTGTAGTCTCATAAAGACGACTGTTGAGAAC
AATTCTGGGATCCACGGAAGCTAAGATCCATGCCATGACTTGAGAATTTT
AACACCCCATTCGGAATAGTGAACCTTATGTTGGATTTTGTCAGAGACGT
GTGCTACAACCAACATGCCCCGACAGATATTTTTCTCTGACAAATATTTG
GGATTGGAACTCCCATACTGAGTAATTTTTGGCATTAAGGCAAACTGATA
AAACATCATATATTTTTCATAGACATGGATGTAGTTCAAAGGAAACAAAA
TACAACTAGAGGGTAATCAGGACAGGGAAACGGATAACCTAGAACAACTT
GACTGGAAAGCAAAAAAGATCCAGAAACTTGGACTAGGATGAGAAAACAA
GAACAAAGAACGTAAGCTAAGCTTTGGGATTGTAACCTAGGTTGATACCG
TGTTAAACTTCGAGAGCACGAGGGCAAAGTTGTGTATTTTCCTGCCGGAG
ACACACACATACCCAATTATTGTGTGTTCCCTCGCTTCTCCAAAATCTTG
ATGATTGATCTCCATATAAGTGGATTATGACTCTCGGATCAACGTTATAT
TTATGGAAAATATTAAAGATCCCCTAAACCAAAAGAAAATACTAAATTTC
TAATCCAAAATTTGGTAATCTTCGCCTCTGATACTATTACAATATTCCAT
TGATTTTCTTGAATTTGTTGGTTTTATTTTTCGATTTGACTGATTTTAGG
GTTTATTCACCATATATGTGTTATTTGTCTTCACAGTTAGAAGAAATCAA
AAGCTCACATGTCTTGGCAACGGTATCTACGAAAGAAACAACTGACAATG
AATCTCCGAAAGATGGGCTCTAAAGCTTCCACGTTTAAACTTGCAATTCT
TGTGGGTAACCTGGTTTGAAATTTTTCCGAAGTGTTCTTTTTTCAGTGGA
GGCGACTACTGAATGTGAATAAGATTTTTGGGAATTTAGTTTTTAACCGA
ACCTCCATGGTATCATATTAATCATGTATCCCAATCTCAGCTGCTGAGAT
TAGACCATTGTTGTTGGTGGTGGTGGTAAGTGACAATTGGTAGATTTTGG
TTATAGGGGATTCCGTTATAACTTGTAATCACCTCTTCAGTCTACATAAG
CTGTCACCTATGTGTAAAATGGTGTTGCTTTCTTATCAATTTATTCTGAT
TTCGCACAGAATTTTGCTTGCTTCTTGGATTACAATGTAATTGATTTGAA
GTTATATTTTGAACTTGCCTGTCCTAGTTACTTCTGTGTTGTGCTTAAAT
TAGGCTGAATAAAGTCTGAACTGC
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Coding sequence (CDS) from alignment at Chr05:8883515..8887538+

>drVigStip.JP252948.2.0.Vigst.05G106000.01 ID=drVigStip.JP252948.2.0.Vigst.05G106000.01; Name=Vigst.05G106000.01; organism=Vigna stipulacea; type=CDS; length=354bp; location=Sequence derived from: Chr05:8883515..8887538+ (Vigna stipulacea
ATGATGATGCGATACAAAGAGGAAAAAGAAGCGAAGAAGGAAGCTTTTAG
AAAATATCTGGAAACGAGTGGAGCTGTGGATGCTCTAACCAAAGTTCTCG
TTGCTTTGTACGAGCAAAACGACAAGCCTTCTTCTGCCGTTGAGTTCATT
CAACAGAAGCTGAGCTGTCCTTCCATCTCCGAGTATGAAAAATTGCAGGC
CGAATTCTCCGATCTGCAAATCAAATACAACGAGCTGTTGGCTGCGCACC
AGAGAACCTGCAAAGAGTTAGAAGAAATCAAAAGCTCACATGTCTTGGCA
ACGGTATCTACGAAAGAAACAACTGACAATGAATCTCCGAAAGATGGGCT
CTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR026060AMY1
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription
Vocabulary: Molecular Function
TermDefinition
GO:0003713transcription coactivator activity