Vum_01G02319.1

Transcript Overview
NameVum_01G02319.1
Unique NamedrVigUmbe.FF25.1.0.Vum_01G02319.1
TypemRNA
OrganismVigna umbellata ()
Sequence length615
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr1chromosomeChr1:43245009..43245799 -Vigna umbellata FF25 genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna umbellata FF25 genome v1.02024-06-26
InterProScan Analysis for Vigna umbellata FF25 genome v1.0 2024-08-05
Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt TrEMBL2024-08-05
Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt Swissprot 2024-08-05
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vum_01G02319drVigUmbe.FF25.1.0.Vum_01G02319Vigna umbellatagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.cds.Vum_01G02319.1drVigUmbe.FF25.1.0.cds.Vum_01G02319.1Vigna umbellataCDS
drVigUmbe.FF25.1.0.cds.Vum_01G02319.1drVigUmbe.FF25.1.0.cds.Vum_01G02319.1_2Vigna umbellataCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.Vum_01G02319.1.exon2drVigUmbe.FF25.1.0.Vum_01G02319.1.exon2Vigna umbellataexon
drVigUmbe.FF25.1.0.Vum_01G02319.1.exon1drVigUmbe.FF25.1.0.Vum_01G02319.1.exon1Vigna umbellataexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.Vum_01G02319.1drVigUmbe.FF25.1.0.Vum_01G02319.1Vigna umbellatapolypeptide
drVigUmbe.FF25.1.0.Vum_01G02319.1drVigUmbe.FF25.1.0.Vum_01G02319.1-proteinVigna umbellatapolypeptide


Homology
BLAST of Vum_01G02319.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9TNT4|A0A0L9TNT4_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g167200 PE=4 SV=1)

HSP 1 Score: 413.305 bits (1061), Expect = 8.395e-146
Identity = 201/204 (98.53%), Postives = 204/204 (100.00%), Query Frame = 0
Query:    1 MASSNPMNSHTNQEQSTWYIVLRLTFDTSQIVSRFQLTMHDGVHITLEQLPDSDTELIPLHARLNENWTQREYELIREPYTQLIPRGTWHNESRTQTNHEIPEHVQNQVDEFFRLLPPSTSPTPYPVFWTQNVLVGRNNSRPTSANQTLQMLPPFPMNVRNEEPSNRTYESQIQMGAATASPSMNANANADEEIDLELRLGRSQ 204
            MAS+NP+NSHTNQEQSTWYIVLRLTFDTSQIVSRFQLTMHDGVHITLEQLPDSDTELIPLHARLNENWTQREYELIREPYTQLIPRGTWHNESRTQTNHEIPEHVQNQVDEFFRLLPPSTSPTPYPVFWTQNVLVGRNNSRPTSANQTLQMLPPFPMNVRNEEPS+RTYESQIQMGAATASPSMNANANADEEIDLELRLGRSQ
Sbjct:    1 MASTNPINSHTNQEQSTWYIVLRLTFDTSQIVSRFQLTMHDGVHITLEQLPDSDTELIPLHARLNENWTQREYELIREPYTQLIPRGTWHNESRTQTNHEIPEHVQNQVDEFFRLLPPSTSPTPYPVFWTQNVLVGRNNSRPTSANQTLQMLPPFPMNVRNEEPSSRTYESQIQMGAATASPSMNANANADEEIDLELRLGRSQ 204          
BLAST of Vum_01G02319.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0LBD8|A0A8T0LBD8_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0037140 PE=4 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 1.989e-117
Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0
Query:   39 MHDGVHITLEQLPDSDTELIPLHARLNENWTQREYELIREPYTQLIPRGTWHNESRTQTNHEIPEHVQNQVDEFFRLLPPSTSPTPYPVFWTQNVLVGRNNSRPTSANQTLQMLPPFPMNVRNEEPSNRTYESQIQMGAATASPSMNANANADEEIDLELRLGRSQ 204
            MHDGVHITLEQLPDSDTELIPLHARLNENWTQREYELIREPYTQLIPRGTWHNESRTQTNHEIPEHVQNQVDEFFRLLPPSTSPTPYPVFWTQNVLVGRNNSRPTSANQTLQMLPPFPMNVRNEEPS+RTYESQIQMGAATASPSMNANANADEEIDLELRLGRSQ
Sbjct:    1 MHDGVHITLEQLPDSDTELIPLHARLNENWTQREYELIREPYTQLIPRGTWHNESRTQTNHEIPEHVQNQVDEFFRLLPPSTSPTPYPVFWTQNVLVGRNNSRPTSANQTLQMLPPFPMNVRNEEPSSRTYESQIQMGAATASPSMNANANADEEIDLELRLGRSQ 166          
BLAST of Vum_01G02319.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6L068|A0A4D6L068_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g2514 PE=4 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 1.082e-98
Identity = 144/204 (70.59%), Postives = 167/204 (81.86%), Query Frame = 0
Query:    1 MASSNPMNSHTNQEQSTWYIVLRLTFDTSQIVSRFQLTMHDGVHITLEQLPDSDTELIPLHARLNENWTQREYELIREPYTQLIPRGTWHNESRTQTNHEIPEHVQNQVDEFFRLLPPSTSPTPYPVFWTQNVLVGRNNSRPTSANQTLQMLPPFPMNVRNEEPSNRTYESQIQMGAATASPSMNANANADEEIDLELRLGRSQ 204
            MAS+NP + HT+QEQSTWYIVLRLTFDTSQIV+RFQLTMHDGVH TLEQ+PDS+ +L+P +  L+E WTQR+YEL+ EPYT LIPRG W NES T   H++PEHVQNQVDEFF LLPPS     YP FW  +++VG + S  +SA+QTLQML   P+NV NEE    TYESQIQMGAATA+PSMNANA+ADEEIDLELRLGRSQ
Sbjct:    1 MASTNPTHGHTDQEQSTWYIVLRLTFDTSQIVTRFQLTMHDGVHFTLEQIPDSEADLLPFNPMLHEAWTQRDYELVHEPYTHLIPRGNWLNESLTLRQHQVPEHVQNQVDEFFSLLPPSDYAGQYPRFWFGDIVVGPSASNNSSADQTLQML---PVNVPNEEAGGSTYESQIQMGAATATPSMNANADADEEIDLELRLGRSQ 201          
BLAST of Vum_01G02319.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7CFY3|V7CFY3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G271700g PE=4 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.188e-59
Identity = 117/206 (56.80%), Postives = 142/206 (68.93%), Query Frame = 0
Query:    1 MASSNPMNSHTNQEQSTWYIVLRLTFDTSQIVSRFQLTMHDGVHITLEQLPDSDTELIPLHARLNENWTQREYELIREPYTQLIPRGTWHNESRTQTNHEIPEHVQNQVDEFFRLLPPSTSPTPYPVFWTQNVLVGR--NNSRPTSANQTLQMLPPFPMNVRNEEPSNRTYESQIQMGAATASPSMNANANADEEIDLELRLGRSQ 204
            MA +NP +  T+Q+Q+TWY++LR++ D SQ V+RFQLTM DGVH  L+ +P+     IP  ARLNE  TQREYELI E   Q+IPRG W NES TQ  H+IPEHVQN V EF R L  S+SPT YP+   Q+ +V R  +NS P + N TLQ+       V + E S+ T+ESQIQMG ATASPSM    N DEEIDLELRLGRSQ
Sbjct:   41 MAVTNPTHGQTHQQQTTWYMILRMSLDPSQNVTRFQLTMPDGVHAVLQPIPE-----IPHRARLNEPLTQREYELINESNRQVIPRGIWLNESWTQRQHQIPEHVQNHVVEFHRQL-SSSSPT-YPLSQNQSTMVARSASNSMPITVNPTLQLF----TLVTSGETSSSTFESQIQMGDATASPSM----NVDEEIDLELRLGRSQ 231          
BLAST of Vum_01G02319.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86VDK1|A0AA86VDK1_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS10702 PE=4 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.324e-42
Identity = 106/234 (45.30%), Postives = 133/234 (56.84%), Query Frame = 0
Query:    1 MASSNPMNSHTNQEQSTWYIVLRLTFDTSQIVSRFQLTMHDGVHITLEQLPDSDTELIPLHARLNENWTQREYELIREPYTQLIPRGTWHNESRTQTNHEIPEHVQNQVDEFFRLLP------------------PSTSPTPYPVFWTQNVLVG--RNNSRPTSANQTLQMLPPFPMNV------RNEEPSNRT----YESQIQMGAATASPSMNANANADEEIDLELRLGRSQ 204
            MAS++P  S TN +Q+TWY++L  T + SQI +RFQL M  GV   LE + +S+T LI    RLNE WTQ E+  I EP T LI  GTW +ES     HEIP+ VQ  V  FF  +P                  P+ S T YP+  +QN++VG   +NS P   NQTLQ+L P PMNV      R  E S+ T    ++SQ +   A AS SM  N  ADEEIDLELRLGR +
Sbjct:    1 MASTDPNMSQTNTQQTTWYMILVRTHEPSQIATRFQLVMLGGVEAILEPVLESNTNLILYRVRLNEPWTQTEHGPILEPNTHLIFYGTWLHESWALIEHEIPQEVQGYVAGFFMQVPTTTYPPQPTYPHDLNIRHPTFSAT-YPMSPSQNIMVGPYASNSMPVIVNQTLQILVPVPMNVPFLLVPRYTEASSSTNTIVHQSQSRTSDAAASTSM--NVTADEEIDLELRLGRRE 231          
BLAST of Vum_01G02319.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445J3A0|A0A445J3A0_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_024686 PE=4 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 6.593e-23
Identity = 83/236 (35.17%), Postives = 113/236 (47.88%), Query Frame = 0
Query:    1 MASSNPMNSHTNQEQSTWYIVLRLTFDTSQIVSRFQLTMHDGVHITLEQLPDSDTELIPLHARLN-----ENWTQREYELIREPYTQLIPRGTWHNESRTQTNHEIPEHVQNQVDEFFRLLPPSTSP-----------------TPYPVFWTQNVLV--GRNNSRPTSANQTLQMLPPFPMNV------RNEEPSNRT----YESQIQMGAATASPSMNANANADEEIDLELRLGR 202
            MA +NP  S TNQ+Q+T   + R T+  SQIV+RF   M  G    L+ +  S+T L+   ARL      E+WTQ E+EL  +   +   +G W   +     ++ P+ VQ+    FF+ L  S SP                  PYP+    N +V    +NS     NQ+ Q+  P PMNV      +  E S  T    Y  Q     ATA  SM+A AN ++EIDLELRLGR
Sbjct:   42 MADTNPNLSQTNQQQTTLCPIPRQTYGPSQIVNRFPSVMQGGDVTILDPITGSNTNLVSHGARLKEPCLYESWTQGEHELFVKGLIKY-GKGDWAKIAEEFVCNKTPQQVQSYAIIFFKNLQQSVSPPPPTYSYGYSSKNPTYFAPYPMSRNLNPMVDPSASNSMSMIVNQSQQLFTPVPMNVPFPLVPQYGEASTSTNTIAYGFQTHTSGATAGTSMHAIANDNKEIDLELRLGR 276          
BLAST of Vum_01G02319.1 vs. ExPASy TrEMBL (2024)
Match: tr|K7LEW5|K7LEW5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=102659381 PE=4 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.713e-22
Identity = 85/238 (35.71%), Postives = 116/238 (48.74%), Query Frame = 0
Query:    1 MASSNPMNSHTNQEQSTWYIVLRLTFDTSQIVSRFQLTMHDGVHITLEQLPDSDTELIPLHARLN-----ENWTQREYELIREPYTQLIPRGTWHNESRTQTNHEIPEHVQNQVDEFFRLL-------PPSTS-------PT---PYPVFWTQNVLV--GRNNSRPTSANQTLQMLPPFPMNV------RNEEPSNRT------YESQIQMGAATASPSMNANANADEEIDLELRLGR 202
            MA +NP  S TNQ+Q+T   + R T+  SQIV+RF   M  G    L+ +  S+T L+   ARL      E+WTQ E+EL  +   +   +G W   +     ++ P+ VQ+    FF+ L       PP+ S       PT   PYP+    N +V    +NS     NQ+ Q+  P PMNV      +  E S  T      Y  Q     ATA  SM+A AN ++EIDLELRLGR
Sbjct:   42 MADTNPNLSQTNQQQTTLCPIPRQTYGPSQIVNRFPSVMQGGDVTILDPITGSNTNLVSHGARLKEPCLYESWTQGEHELFVKGLIKY-GKGDWAKIAEEFVCNKTPQQVQSYAIIFFKNLQQSVNPPPPTYSYGYSSKNPTYFAPYPMSRNLNPMVDPSASNSMSMIVNQSQQLFTPVPMNVPFPLVPQYGEASTSTNTNTIAYGFQTHTSGATAGTSMHAIANDNKEIDLELRLGR 278          
BLAST of Vum_01G02319.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371GW06|A0A371GW06_MUCPR (Transcription factor DIVARICATA (Fragment) OS=Mucuna pruriens OX=157652 GN=DIVARICATA PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.721e-20
Identity = 81/218 (37.16%), Postives = 109/218 (50.00%), Query Frame = 0
Query:    1 MASSNPMNSHTNQEQSTWYIVLRLTFDTSQIVSRFQLTMHDGVHITLEQLPDSDTELIPLHARLNENWTQREYELIREPYTQLIPRGTWHNESRTQTNHEIPEHVQNQVDEFFRLLP-PSTSPTPYPVFWTQNVLVG--RNNSRPTSANQTLQML------PPFPMNVRNEEPSNRT------YESQIQMGAATASPSMNANANADEEIDLELRLGRS 203
            M S+N   S TNQ+Q   +   R   + SQIV+ FQ +M  GV   LE  P+S T L+P    L+E WTQRE+EL      +   +G W   ++    ++ P+ VQ+    F R LP P     PY +    N+ VG   + S P   NQ+ Q+        PF +     E SN T      +  Q+Q    TAS SMNA A+A+EEIDLELRL  S
Sbjct:   35 MPSTNLNLSQTNQQQINSWPTSRNVDEPSQIVTGFQPSMQGGVVAILEPTPESYTHLVPHGTSLDEPWTQREHELFVMGLIRY-GKGRWTKIAKDYVCNKTPQQVQSYAASFSRNLPLPPAYSAPYLMSRNWNLTVGPSASYSMPVIVNQSQQLFTLVPVSAPFILVPTYGEASNNTNTNTIMHGFQMQTIRTTASTSMNAIASANEEIDLELRLESS 251          
BLAST of Vum_01G02319.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8KXB3|A0A8B8KXB3_ABRPR (Uncharacterized protein LOC113859403 OS=Abrus precatorius OX=3816 GN=LOC113859403 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 8.916e-17
Identity = 73/218 (33.49%), Postives = 109/218 (50.00%), Query Frame = 0
Query:    8 NSH-TNQEQSTWYIVLRLTFDTSQIVSRFQLTMHDGVHITLEQ-LPDSDTELIPLHARLNENWTQREYELIREPYTQLIPRGTWHNESRTQTNHEIPEHVQNQVDEFFRLLPPS---TSPTPYPVFWTQNVL------VGRNNSRPTSANQTLQMLPPFP------MNVRNEEPSNRT----YESQIQMGAATASPSMNANANADEEIDLELRLGRSQ 204
            NSH  +Q+Q+T    L+ T++ S I SRFQL +HD    T+   +P+S+T L P  ARLNE W+Q E+EL      +   RG W   ++    ++  + +Q+    FF  LP +      T    F+T +++         +NS P   N++ Q L  FP      + + N E S+ T    Y SQ+Q G    S     NA+   E+DLELRLGR +
Sbjct:   50 NSHRCSQQQTTPCSSLKYTYEPSHIASRFQLGVHDERIATVPAPVPESNTYLFPQGARLNELWSQTEHELFLRGIIKY-GRGHWSEIAKHFLPNKTAQEIQSYATSFFTNLPSAHHEDYCTRKQTFFTNSLMPRDKMSASPSNSMPMIDNKSQQTLMLFPEEDSFLLVLSNGEASSNTKTDMYGSQMQTGGENTS----MNASVIGEVDLELRLGRCK 262          
BLAST of Vum_01G02319.1 vs. ExPASy TrEMBL (2024)
Match: tr|K7KLN3|K7KLN3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=102665898 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.758e-17
Identity = 82/222 (36.94%), Postives = 106/222 (47.75%), Query Frame = 0
Query:    1 MASSNPMNSHTNQEQSTWYIVLRLTFDTSQIVSRFQLTMHDGVHITLEQLPDSDTELIPLHARLNENWTQREYELIREPYTQLIP--RGTWHNESRTQTNHEIPEHVQNQVDEFFRLLPPSTSPTPY----PVFWTQNVLVGRNN------SRPTSAN----QTLQMLP---PFPMNVRNEEP--SNRTYESQIQMGAATASPSMNANANADEEIDLELRLG 201
            MA +N     TNQ QST +     T + SQI + FQ +M   V   LE +P+S T + P  ARL E WT RE+EL    +  LI   RG W   +R    ++ P  VQ+    FFR L PST    +    P + T +++   NN      S P   N    QT  + P   PF +   + E   SN T     QM    A  SMNA+AN   E+DLELRLG
Sbjct:   48 MACTN-----TNQPQSTLWAASGHTNEHSQIATTFQPSMQQRVATVLEPVPESITCMFPHGARLKEPWTHREHELF---FVGLIKYGRGHWSKIARQFLLNKTPHQVQSYGASFFRHL-PSTHLHGFRRRKPTYSTSSLMPKNNNLMAASVSMPMIVNELQQQTHMLFPENAPFLLAPSHGEASSSNNTTMYGFQMQTGGARTSMNASANG--EVDLELRLG 258          
The following BLAST results are available for this feature:
BLAST of Vum_01G02319.1 vs.
Analysis Date: 2024-06-26 (Vigna umbellata FF25 genome v1.0)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Vum_01G02319.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-05 (Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0L9TNT4|A0A0L9TNT4_PHAAN8.395e-14698.53Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A8T0LBD8|A0A8T0LBD8_PHAAN1.989e-11799.40Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A4D6L068|A0A4D6L068_VIGUN1.082e-9870.59Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|V7CFY3|V7CFY3_PHAVU1.188e-5956.80Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0AA86VDK1|A0AA86VDK1_9FABA1.324e-4245.30Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A445J3A0|A0A445J3A0_GLYSO6.593e-2335.17Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|K7LEW5|K7LEW5_SOYBN4.713e-2235.71Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A371GW06|A0A371GW06_MUCPR3.721e-2037.16Transcription factor DIVARICATA (Fragment) OS=Mucu... [more]
tr|A0A8B8KXB3|A0A8B8KXB3_ABRPR8.916e-1733.49Uncharacterized protein LOC113859403 OS=Abrus prec... [more]
tr|K7KLN3|K7KLN3_SOYBN9.758e-1736.94Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
back to top
BLAST of Vum_01G02319.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-05 (Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt Swissprot )
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigUmbe.FF25.1.0.Vum_01G02319.1 ID=drVigUmbe.FF25.1.0.Vum_01G02319.1; Name=Vum_01G02319.1; organism=Vigna umbellata; type=mRNA; length=615bp
ATGGCTAGCAGCAATCCCATGAATAGCCACACCAACCAAGAACAATCTAC
TTGGTACATAGTTCTAAGACTTACCTTTGACACCTCTCAGATTGTTTCCA
GGTTCCAACTAACCATGCATGATGGGGTTCATATCACACTTGAACAATTA
CCTGATTCAGATACAGAACTCATTCCTCTCCATGCTAGGCTCAACGAGAA
CTGGACTCAAAGAGAGTATGAACTGATACGTGAACCATACACACAACTGA
TTCCTCGTGGAACTTGGCATAACGAGTCTAGGACCCAGACAAACCATGAG
ATTCCTGAACATGTTCAGAACCAGGTTGATGAGTTCTTTCGGCTACTACC
GCCATCAACCTCACCTACACCTTATCCCGTCTTCTGGACTCAGAACGTTC
TGGTGGGTCGAAACAACTCTAGGCCTACCAGTGCTAACCAGACACTGCAA
ATGCTCCCACCTTTCCCAATGAATGTTCGAAATGAAGAACCTAGCAATCG
CACCTATGAGTCTCAAATTCAAATGGGTGCTGCAACTGCAAGCCCTTCCA
TGAATGCCAATGCCAATGCTGATGAAGAAATTGATTTGGAGTTGCGCTTG
GGTCGAAGCCAATGA
back to top

protein sequence of drVigUmbe.FF25.1.0.Vum_01G02319.1

>drVigUmbe.FF25.1.0.Vum_01G02319.1 ID=drVigUmbe.FF25.1.0.Vum_01G02319.1; Name=drVigUmbe.FF25.1.0.Vum_01G02319.1; organism=Vigna umbellata; type=polypeptide; length=204bp
MASSNPMNSHTNQEQSTWYIVLRLTFDTSQIVSRFQLTMHDGVHITLEQL
PDSDTELIPLHARLNENWTQREYELIREPYTQLIPRGTWHNESRTQTNHE
IPEHVQNQVDEFFRLLPPSTSPTPYPVFWTQNVLVGRNNSRPTSANQTLQ
MLPPFPMNVRNEEPSNRTYESQIQMGAATASPSMNANANADEEIDLELRL
GRSQ
back to top

mRNA from alignment at Chr1:43245009..43245799-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigUmbe.FF25.1.0.Vum_01G02319.1 ID=drVigUmbe.FF25.1.0.Vum_01G02319.1; Name=Vum_01G02319.1; organism=Vigna umbellata; type=mRNA; length=791bp; location=Sequence derived from: Chr1:43245009..43245799- (Vigna umbellata
ATGGCTAGCAGCAATCCCATGAATAGCCACACCAACCAAGAACAATCTAC TTGGTACATAGTTCTAAGACTTACCTTTGACACCTCTCAGATTGTTTCCA GGTTCCAACTAACCATGCATGATGGGGTTCATATCACACTTGAACAATTA CCTGATTCAGATACAGAACTCATTCCTCTCCATGCTAGGCTCAACGAGAA CTGGACTCAAAGAGAGTATGAACTGATACGTGAACCATACACACAACTGA TTCCTCGTGGAACTTGGCATAACGAGTCTAGGACCCAGACAAACCATGAG TTTGTGTCCTTCAAGCTTAATCTAATTCATTTCAAATAACATTCTTCTTT GCTTTTGCTTTTGCTTTTGCTTTTTGATTCTTCTTGTTACATTTTCAACT TCTTAGTGTTCATTTCACAGGCATGGAAAAAGACATTAGTCTAAAATTTC TTAAAGACCTTTTTATGTGCATCAGGATTCCTGAACATGTTCAGAACCAG GTTGATGAGTTCTTTCGGCTACTACCGCCATCAACCTCACCTACACCTTA TCCCGTCTTCTGGACTCAGAACGTTCTGGTGGGTCGAAACAACTCTAGGC CTACCAGTGCTAACCAGACACTGCAAATGCTCCCACCTTTCCCAATGAAT GTTCGAAATGAAGAACCTAGCAATCGCACCTATGAGTCTCAAATTCAAAT GGGTGCTGCAACTGCAAGCCCTTCCATGAATGCCAATGCCAATGCTGATG AAGAAATTGATTTGGAGTTGCGCTTGGGTCGAAGCCAATGA
back to top

Coding sequence (CDS) from alignment at Chr1:43245009..43245799-

>drVigUmbe.FF25.1.0.Vum_01G02319.1 ID=drVigUmbe.FF25.1.0.Vum_01G02319.1; Name=Vum_01G02319.1; organism=Vigna umbellata; type=CDS; length=615bp; location=Sequence derived from: Chr1:43245009..43245799- (Vigna umbellata
ATGGCTAGCAGCAATCCCATGAATAGCCACACCAACCAAGAACAATCTAC
TTGGTACATAGTTCTAAGACTTACCTTTGACACCTCTCAGATTGTTTCCA
GGTTCCAACTAACCATGCATGATGGGGTTCATATCACACTTGAACAATTA
CCTGATTCAGATACAGAACTCATTCCTCTCCATGCTAGGCTCAACGAGAA
CTGGACTCAAAGAGAGTATGAACTGATACGTGAACCATACACACAACTGA
TTCCTCGTGGAACTTGGCATAACGAGTCTAGGACCCAGACAAACCATGAG
ATTCCTGAACATGTTCAGAACCAGGTTGATGAGTTCTTTCGGCTACTACC
GCCATCAACCTCACCTACACCTTATCCCGTCTTCTGGACTCAGAACGTTC
TGGTGGGTCGAAACAACTCTAGGCCTACCAGTGCTAACCAGACACTGCAA
ATGCTCCCACCTTTCCCAATGAATGTTCGAAATGAAGAACCTAGCAATCG
CACCTATGAGTCTCAAATTCAAATGGGTGCTGCAACTGCAAGCCCTTCCA
TGAATGCCAATGCCAATGCTGATGAAGAAATTGATTTGGAGTTGCGCTTG
GGTCGAAGCCAATGA
back to top