XM_058884364.1
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4XVS9|A0A9D4XVS9_PEA (PTM/DIR17-like Tudor domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_031779 PE=4 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 1.086e-88 Identity = 127/142 (89.44%), Postives = 132/142 (92.96%), Query Frame = 0 Query: 1 MEEDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIRNHTKKSKHKARN 142 MEE KGNKQESNA ATEVY VPGEPAVVINGVPEI GASSIV SCD LSV +KDGNMGLGDWF+GRDIQKLFMGSYYSGKVTEYDKE GWYRVKYEDGDTEDLDWLELKEVLRP+DV+VSLKTL NKVIRNHT+ SKHKARN Sbjct: 1 MEEGKGNKQESNASATEVYAVPGEPAVVINGVPEIGGASSIVPSCDALSVSEKDGNMGLGDWFIGRDIQKLFMGSYYSGKVTEYDKETGWYRVKYEDGDTEDLDWLELKEVLRPLDVSVSLKTLANKVIRNHTQISKHKARN 142
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6MVH6|A0A2Z6MVH6_TRISU (Tudor domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_337530 PE=4 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 4.221e-64 Identity = 98/134 (73.13%), Postives = 106/134 (79.10%), Query Frame = 0 Query: 1 MEEDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIRNHTK 134 MEEDKGNKQESNA ATEVY +PGEPAVVINGVPEIV S S D LS+ + NM LG+WFVGRD+QKLFMG YYSGKVT YDK+NGWY V YEDGD EDLDW ELKEVLRP+DV + LKTL KVIR K Sbjct: 1 MEEDKGNKQESNASATEVYEIPGEPAVVINGVPEIVPGSGSGPSVDALSINETRENMSLGEWFVGRDVQKLFMGRYYSGKVTMYDKQNGWYHVVYEDGDNEDLDWPELKEVLRPLDVKIDLKTLAQKVIRKSKK 134
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XSP1|A0A1S2XSP1_CICAR (Dirigent protein 17 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101506284 PE=4 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.006e-60 Identity = 94/138 (68.12%), Postives = 112/138 (81.16%), Query Frame = 0 Query: 3 EDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIRNHTKKSKHKA 140 E+ GNKQESNA AT VY +PGEPAVVINGVPEIV S V S + S+ GN+GLG+WFVGRD+ KLF G+Y+SGKVT+Y+KE+GWYRV YEDGD+EDLDW ELKEVLRP+DVT+SLKTL +VIR +KK HK+ Sbjct: 2 EENGNKQESNASATGVYELPGEPAVVINGVPEIVPGCSAVPSGNASSIVGTHGNLGLGEWFVGRDVLKLFKGNYFSGKVTDYEKESGWYRVLYEDGDSEDLDWQELKEVLRPLDVTISLKTLAQRVIRK-SKKPIHKS 138
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XSM7|A0A1S2XSM7_CICAR (Dirigent protein 17 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101506284 PE=4 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.898e-59 Identity = 90/130 (69.23%), Postives = 107/130 (82.31%), Query Frame = 0 Query: 3 EDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIRNH 132 E+ GNKQESNA AT VY +PGEPAVVINGVPEIV S V S + S+ GN+GLG+WFVGRD+ KLF G+Y+SGKVT+Y+KE+GWYRV YEDGD+EDLDW ELKEVLRP+DVT+SLKTL +VIR + Sbjct: 2 EENGNKQESNASATGVYELPGEPAVVINGVPEIVPGCSAVPSGNASSIVGTHGNLGLGEWFVGRDVLKLFKGNYFSGKVTDYEKESGWYRVLYEDGDSEDLDWQELKEVLRPLDVTISLKTLAQRVIRKN 131
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3MP24|A0A2K3MP24_TRIPR (PTM/DIR17-like Tudor domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g015689 PE=4 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.010e-58 Identity = 96/138 (69.57%), Postives = 104/138 (75.36%), Query Frame = 0 Query: 1 MEEDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVS----SCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIRNHTK 134 MEEDK KQESNA AT VY +PGEPAVVINGVPEIV S S S D LS+ + NMGLG+WFVGRD+QK FMG YYSGKVT YDK+NGWY V YEDGD EDLDW ELKEVLRP+DV + LKTL KVIR K Sbjct: 1 MEEDKEIKQESNASATGVYEIPGEPAVVINGVPEIVTGSGNGSGTDPSIDALSIHETRENMGLGEWFVGRDVQKSFMGRYYSGKVTMYDKQNGWYHVVYEDGDNEDLDWPELKEVLRPLDVKIDLKTLAQKVIRKSKK 138
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|G7L0N7|G7L0N7_MEDTR (Lamin-B receptor of TUDOR domain protein OS=Medicago truncatula OX=3880 GN=11431426 PE=4 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 2.002e-54 Identity = 87/129 (67.44%), Postives = 98/129 (75.97%), Query Frame = 0 Query: 1 MEEDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVI 129 ME DKGNKQES AFAT +Y +PGE AVVING P + S V S D SV + GN+ LGDWFVGRD+QKLF YYSGKV YDKE+G Y+V+YEDGD EDLDW ELKEVLRP DVT+SLKTL +VI Sbjct: 1 MESDKGNKQESAAFATGIYEIPGETAVVINGAPVVPDGSGAVPSRDVSSVVETHGNLDLGDWFVGRDVQKLFRERYYSGKVINYDKESGLYKVQYEDGDLEDLDWPELKEVLRPFDVTISLKTLAQRVI 129
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LCX7|A0A8B8LCX7_ABRPR (Dirigent protein 17-like OS=Abrus precatorius OX=3816 GN=LOC113863269 PE=4 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 2.781e-50 Identity = 79/141 (56.03%), Postives = 100/141 (70.92%), Query Frame = 0 Query: 3 EDKGNKQES-NAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIRNHTKKSKHKARN 142 E GNKQES NA AT VY +PGEPA+VINGVP+I+ +S + + S GLG+WF GR+++K FMG YYSG VT+YDK++GWYRV YEDGD+EDLDW EL+EVL P+DVTV LK L +++R TK +N Sbjct: 2 EGNGNKQESSNASATGVYELPGEPAIVINGVPDIIPGASTIPPSNASSTVQTHWPFGLGEWFEGREVRKWFMGRYYSGTVTDYDKDSGWYRVHYEDGDSEDLDWQELEEVLLPLDVTVPLKALAQRIVRKGTKSVPKSVKN 142
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TV05|A0A151TV05_CAJCA (PTM/DIR17-like Tudor domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_010061 PE=4 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 8.181e-50 Identity = 78/138 (56.52%), Postives = 101/138 (73.19%), Query Frame = 0 Query: 3 EDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIRNHTKKSKHKA 140 EDKG KQESNA A ++ +PGEPA+VINGVP+I+ + V+ + + GLG+WF GR+++K FMG YYSG VTE+DK++GWYRV YEDGD+EDLDW EL+EVL P+DVT+SLK L K++RN K K A Sbjct: 2 EDKGIKQESNASAAGIHELPGEPAIVINGVPDIIPSDCTVAPHNASCKVETHVPSGLGEWFEGREVRKWFMGRYYSGIVTEFDKDSGWYRVHYEDGDSEDLDWHELEEVLLPLDVTISLKALTQKIVRNGKKSVKSAA 139
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|G7L0N9|G7L0N9_MEDTR (Putative Tudor domain-containing protein OS=Medicago truncatula OX=3880 GN=11427130 PE=4 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 6.033e-49 Identity = 81/133 (60.90%), Postives = 103/133 (77.44%), Query Frame = 0 Query: 11 SNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSC---DTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIRNHTKKSKHKA 140 SN+ A VY PGEPA+VI+GVPEIV SS + + LS+ + +GLG+WFVGRD+QKLFMG YYSG+VTEYD E+GWY V+YEDGD+EDLDWLELKEVL P++V +SLKT+ +V+RN +KKS K+ Sbjct: 12 SNSSAARVYDFPGEPAIVIDGVPEIVSGSSSSAVPSSSNALSIVEPHRKLGLGEWFVGRDVQKLFMGRYYSGRVTEYDMESGWYHVEYEDGDSEDLDWLELKEVLSPLEVGISLKTMAQRVVRN-SKKSIPKS 143
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1JPH0|I1JPH0_SOYBN (PTM/DIR17-like Tudor domain-containing protein OS=Glycine max OX=3847 GN=100814837 PE=4 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.608e-48 Identity = 73/128 (57.03%), Postives = 95/128 (74.22%), Query Frame = 0 Query: 3 EDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIR 130 ED G KQ+SNA A VY +PGEPA+VINGVP+I+ ++ + S + GLG+WF GRD+QK FMG Y+SG VT++DK++GWYRV YEDGD+EDLDW EL+EVL P+DVTV LK L +++R Sbjct: 2 EDNGIKQQSNASAAGVYELPGEPAIVINGVPDIIPGGCTIAPGNASSKVEMHAPSGLGEWFEGRDVQKWFMGRYFSGMVTDFDKDSGWYRVHYEDGDSEDLDWQELEEVLLPLDVTVPLKALARRIVR 129
BLAST of XM_058884364.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|F4J4N3|DIR17_ARATH (Dirigent protein 17 OS=Arabidopsis thaliana OX=3702 GN=DIR17 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.397e-35 Identity = 57/117 (48.72%), Postives = 83/117 (70.94%), Query Frame = 0 Query: 1 MEEDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDV 117 ME+ KQE+ + ++ +PGEPAVVINGVP+ +++ + +S G +G G+W GR+++K F+G YYSG VT++DK++GWYRV+YEDGD+EDLDW EL+EVL P+D Sbjct: 1 MEDTGSIKQEAQSHPPGIFEIPGEPAVVINGVPDEPQTDCMIAKDEPIS----SGTVGSGEWLEGREVRKFFLGRYYSGTVTKFDKQSGWYRVEYEDGDSEDLDWSELEEVLLPLDT 113
BLAST of XM_058884364.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:21512479-21513905 REVERSE LENGTH=271) HSP 1 Score: 126.716 bits (317), Expect = 1.446e-36 Identity = 57/117 (48.72%), Postives = 83/117 (70.94%), Query Frame = 0 Query: 1 MEEDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDV 117 ME+ KQE+ + ++ +PGEPAVVINGVP+ +++ + +S G +G G+W GR+++K F+G YYSG VT++DK++GWYRV+YEDGD+EDLDW EL+EVL P+D Sbjct: 1 MEDTGSIKQEAQSHPPGIFEIPGEPAVVINGVPDEPQTDCMIAKDEPIS----SGTVGSGEWLEGREVRKFFLGRYYSGTVTKFDKQSGWYRVEYEDGDSEDLDWSELEEVLLPLDT 113 The following BLAST results are available for this feature:
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of XM_058884364.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt Swissprot) Total hits: 1
BLAST of XM_058884364.1 vs. Araport11
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs arabidopsis Araport11) Total hits: 1
InterPro
Analysis Name: InterProScan Analysis for Vicia villosa cv. AU Merit genome v1.0
Date Performed: 2024-08-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >drVicVill.AUMerit.1.0.rna-XM_058884364.1 ID=drVicVill.AUMerit.1.0.rna-XM_058884364.1; Name=XM_058884364.1; organism=Vicia villosa; type=mRNA; length=429bpback to top protein sequence of drVicVill.AUMerit.1.0.rna-XM_058884364.1 >drVicVill.AUMerit.1.0.rna-XM_058884364.1 ID=drVicVill.AUMerit.1.0.rna-XM_058884364.1; Name=drVicVill.AUMerit.1.0.rna-XM_058884364.1; organism=Vicia villosa; type=polypeptide; length=142bpback to top mRNA from alignment at LG6:142532835..142534180- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>drVicVill.AUMerit.1.0.rna-XM_058884364.1 ID=drVicVill.AUMerit.1.0.rna-XM_058884364.1; Name=XM_058884364.1; organism=Vicia villosa; type=mRNA; length=1346bp; location=Sequence derived from: LG6:142532835..142534180- (Vicia villosaback to top Coding sequence (CDS) from alignment at LG6:142532835..142534180- >drVicVill.AUMerit.1.0.rna-XM_058884364.1 ID=drVicVill.AUMerit.1.0.rna-XM_058884364.1; Name=XM_058884364.1; organism=Vicia villosa; type=CDS; length=864bp; location=Sequence derived from: LG6:142532835..142534180- (Vicia villosaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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