XM_058884364.1

Transcript Overview
NameXM_058884364.1
Unique NamedrVicVill.AUMerit.1.0.rna-XM_058884364.1
TypemRNA
OrganismVicia villosa (vetch)
Sequence length429
References
External references for this mRNA
DatabaseAccession
GeneID131612598
GenBankXM_058884364.1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
LG6chromosomeLG6:142532835..142534180 -Vicia villosa cv. AU Merit genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
carvvaL191Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvvaL247Pisum sativum Cameor genome v1aPisum sativum
avjvvaL495Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvvaL0631Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvvaL517Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvvaL0960Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
pvvvaL076Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vasvvaL489Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvvaL510Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvvaL620Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vvavvaL084Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaL054Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vstvvaL496Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvvaL519Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vumvvaL630Vigna umbellata FF25 genome v1.0Vigna umbellata
vssvvaL641Vicia sativa cv. Studenica genome v1.0Vicia sativa
vumvvaL650Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
Vigst.04G207800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigan.04G323900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
jg32224.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.5g133200.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.001G173000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-TanjilR_28307Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vum_04G02333.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-TanjilR_18702Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va03G072530.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.Ca_v2.0_07634Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LOC131612598drVicVill.AUMerit.1.0.gene-LOC131612598Vicia villosagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVicVill.AUMerit.1.0.rna-XM_058884364.1drVicVill.AUMerit.1.0.rna-XM_058884364.1Vicia villosapolypeptide
drVicVill.AUMerit.1.0.rna-XM_058884364.1drVicVill.AUMerit.1.0.rna-XM_058884364.1-proteinVicia villosapolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_058884364.1-3drVicVill.AUMerit.1.0.exon-XM_058884364.1-3Vicia villosaexon
exon-XM_058884364.1-2drVicVill.AUMerit.1.0.exon-XM_058884364.1-2Vicia villosaexon
exon-XM_058884364.1-1drVicVill.AUMerit.1.0.exon-XM_058884364.1-1Vicia villosaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
XP_058740347.1drVicVill.AUMerit.1.0.cds-XP_058740347.1_3Vicia villosaCDS
XP_058740347.1drVicVill.AUMerit.1.0.cds-XP_058740347.1_2Vicia villosaCDS
XP_058740347.1drVicVill.AUMerit.1.0.cds-XP_058740347.1Vicia villosaCDS


Homology
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4XVS9|A0A9D4XVS9_PEA (PTM/DIR17-like Tudor domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_031779 PE=4 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 1.086e-88
Identity = 127/142 (89.44%), Postives = 132/142 (92.96%), Query Frame = 0
Query:    1 MEEDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIRNHTKKSKHKARN 142
            MEE KGNKQESNA ATEVY VPGEPAVVINGVPEI GASSIV SCD LSV +KDGNMGLGDWF+GRDIQKLFMGSYYSGKVTEYDKE GWYRVKYEDGDTEDLDWLELKEVLRP+DV+VSLKTL NKVIRNHT+ SKHKARN
Sbjct:    1 MEEGKGNKQESNASATEVYAVPGEPAVVINGVPEIGGASSIVPSCDALSVSEKDGNMGLGDWFIGRDIQKLFMGSYYSGKVTEYDKETGWYRVKYEDGDTEDLDWLELKEVLRPLDVSVSLKTLANKVIRNHTQISKHKARN 142          
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6MVH6|A0A2Z6MVH6_TRISU (Tudor domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_337530 PE=4 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 4.221e-64
Identity = 98/134 (73.13%), Postives = 106/134 (79.10%), Query Frame = 0
Query:    1 MEEDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIRNHTK 134
            MEEDKGNKQESNA ATEVY +PGEPAVVINGVPEIV  S    S D LS+ +   NM LG+WFVGRD+QKLFMG YYSGKVT YDK+NGWY V YEDGD EDLDW ELKEVLRP+DV + LKTL  KVIR   K
Sbjct:    1 MEEDKGNKQESNASATEVYEIPGEPAVVINGVPEIVPGSGSGPSVDALSINETRENMSLGEWFVGRDVQKLFMGRYYSGKVTMYDKQNGWYHVVYEDGDNEDLDWPELKEVLRPLDVKIDLKTLAQKVIRKSKK 134          
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XSP1|A0A1S2XSP1_CICAR (Dirigent protein 17 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101506284 PE=4 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.006e-60
Identity = 94/138 (68.12%), Postives = 112/138 (81.16%), Query Frame = 0
Query:    3 EDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIRNHTKKSKHKA 140
            E+ GNKQESNA AT VY +PGEPAVVINGVPEIV   S V S +  S+    GN+GLG+WFVGRD+ KLF G+Y+SGKVT+Y+KE+GWYRV YEDGD+EDLDW ELKEVLRP+DVT+SLKTL  +VIR  +KK  HK+
Sbjct:    2 EENGNKQESNASATGVYELPGEPAVVINGVPEIVPGCSAVPSGNASSIVGTHGNLGLGEWFVGRDVLKLFKGNYFSGKVTDYEKESGWYRVLYEDGDSEDLDWQELKEVLRPLDVTISLKTLAQRVIRK-SKKPIHKS 138          
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XSM7|A0A1S2XSM7_CICAR (Dirigent protein 17 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101506284 PE=4 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.898e-59
Identity = 90/130 (69.23%), Postives = 107/130 (82.31%), Query Frame = 0
Query:    3 EDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIRNH 132
            E+ GNKQESNA AT VY +PGEPAVVINGVPEIV   S V S +  S+    GN+GLG+WFVGRD+ KLF G+Y+SGKVT+Y+KE+GWYRV YEDGD+EDLDW ELKEVLRP+DVT+SLKTL  +VIR +
Sbjct:    2 EENGNKQESNASATGVYELPGEPAVVINGVPEIVPGCSAVPSGNASSIVGTHGNLGLGEWFVGRDVLKLFKGNYFSGKVTDYEKESGWYRVLYEDGDSEDLDWQELKEVLRPLDVTISLKTLAQRVIRKN 131          
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3MP24|A0A2K3MP24_TRIPR (PTM/DIR17-like Tudor domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g015689 PE=4 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.010e-58
Identity = 96/138 (69.57%), Postives = 104/138 (75.36%), Query Frame = 0
Query:    1 MEEDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVS----SCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIRNHTK 134
            MEEDK  KQESNA AT VY +PGEPAVVINGVPEIV  S   S    S D LS+ +   NMGLG+WFVGRD+QK FMG YYSGKVT YDK+NGWY V YEDGD EDLDW ELKEVLRP+DV + LKTL  KVIR   K
Sbjct:    1 MEEDKEIKQESNASATGVYEIPGEPAVVINGVPEIVTGSGNGSGTDPSIDALSIHETRENMGLGEWFVGRDVQKSFMGRYYSGKVTMYDKQNGWYHVVYEDGDNEDLDWPELKEVLRPLDVKIDLKTLAQKVIRKSKK 138          
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|G7L0N7|G7L0N7_MEDTR (Lamin-B receptor of TUDOR domain protein OS=Medicago truncatula OX=3880 GN=11431426 PE=4 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.002e-54
Identity = 87/129 (67.44%), Postives = 98/129 (75.97%), Query Frame = 0
Query:    1 MEEDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVI 129
            ME DKGNKQES AFAT +Y +PGE AVVING P +   S  V S D  SV +  GN+ LGDWFVGRD+QKLF   YYSGKV  YDKE+G Y+V+YEDGD EDLDW ELKEVLRP DVT+SLKTL  +VI
Sbjct:    1 MESDKGNKQESAAFATGIYEIPGETAVVINGAPVVPDGSGAVPSRDVSSVVETHGNLDLGDWFVGRDVQKLFRERYYSGKVINYDKESGLYKVQYEDGDLEDLDWPELKEVLRPFDVTISLKTLAQRVI 129          
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LCX7|A0A8B8LCX7_ABRPR (Dirigent protein 17-like OS=Abrus precatorius OX=3816 GN=LOC113863269 PE=4 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 2.781e-50
Identity = 79/141 (56.03%), Postives = 100/141 (70.92%), Query Frame = 0
Query:    3 EDKGNKQES-NAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIRNHTKKSKHKARN 142
            E  GNKQES NA AT VY +PGEPA+VINGVP+I+  +S +   +  S        GLG+WF GR+++K FMG YYSG VT+YDK++GWYRV YEDGD+EDLDW EL+EVL P+DVTV LK L  +++R  TK      +N
Sbjct:    2 EGNGNKQESSNASATGVYELPGEPAIVINGVPDIIPGASTIPPSNASSTVQTHWPFGLGEWFEGREVRKWFMGRYYSGTVTDYDKDSGWYRVHYEDGDSEDLDWQELEEVLLPLDVTVPLKALAQRIVRKGTKSVPKSVKN 142          
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TV05|A0A151TV05_CAJCA (PTM/DIR17-like Tudor domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_010061 PE=4 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 8.181e-50
Identity = 78/138 (56.52%), Postives = 101/138 (73.19%), Query Frame = 0
Query:    3 EDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIRNHTKKSKHKA 140
            EDKG KQESNA A  ++ +PGEPA+VINGVP+I+ +   V+  +     +     GLG+WF GR+++K FMG YYSG VTE+DK++GWYRV YEDGD+EDLDW EL+EVL P+DVT+SLK L  K++RN  K  K  A
Sbjct:    2 EDKGIKQESNASAAGIHELPGEPAIVINGVPDIIPSDCTVAPHNASCKVETHVPSGLGEWFEGREVRKWFMGRYYSGIVTEFDKDSGWYRVHYEDGDSEDLDWHELEEVLLPLDVTISLKALTQKIVRNGKKSVKSAA 139          
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|G7L0N9|G7L0N9_MEDTR (Putative Tudor domain-containing protein OS=Medicago truncatula OX=3880 GN=11427130 PE=4 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 6.033e-49
Identity = 81/133 (60.90%), Postives = 103/133 (77.44%), Query Frame = 0
Query:   11 SNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSC---DTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIRNHTKKSKHKA 140
            SN+ A  VY  PGEPA+VI+GVPEIV  SS  +     + LS+ +    +GLG+WFVGRD+QKLFMG YYSG+VTEYD E+GWY V+YEDGD+EDLDWLELKEVL P++V +SLKT+  +V+RN +KKS  K+
Sbjct:   12 SNSSAARVYDFPGEPAIVIDGVPEIVSGSSSSAVPSSSNALSIVEPHRKLGLGEWFVGRDVQKLFMGRYYSGRVTEYDMESGWYHVEYEDGDSEDLDWLELKEVLSPLEVGISLKTMAQRVVRN-SKKSIPKS 143          
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1JPH0|I1JPH0_SOYBN (PTM/DIR17-like Tudor domain-containing protein OS=Glycine max OX=3847 GN=100814837 PE=4 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.608e-48
Identity = 73/128 (57.03%), Postives = 95/128 (74.22%), Query Frame = 0
Query:    3 EDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDVTVSLKTLVNKVIR 130
            ED G KQ+SNA A  VY +PGEPA+VINGVP+I+     ++  +  S  +     GLG+WF GRD+QK FMG Y+SG VT++DK++GWYRV YEDGD+EDLDW EL+EVL P+DVTV LK L  +++R
Sbjct:    2 EDNGIKQQSNASAAGVYELPGEPAIVINGVPDIIPGGCTIAPGNASSKVEMHAPSGLGEWFEGRDVQKWFMGRYFSGMVTDFDKDSGWYRVHYEDGDSEDLDWQELEEVLLPLDVTVPLKALARRIVR 129          
BLAST of XM_058884364.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|F4J4N3|DIR17_ARATH (Dirigent protein 17 OS=Arabidopsis thaliana OX=3702 GN=DIR17 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.397e-35
Identity = 57/117 (48.72%), Postives = 83/117 (70.94%), Query Frame = 0
Query:    1 MEEDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDV 117
            ME+    KQE+ +    ++ +PGEPAVVINGVP+      +++  + +S     G +G G+W  GR+++K F+G YYSG VT++DK++GWYRV+YEDGD+EDLDW EL+EVL P+D 
Sbjct:    1 MEDTGSIKQEAQSHPPGIFEIPGEPAVVINGVPDEPQTDCMIAKDEPIS----SGTVGSGEWLEGREVRKFFLGRYYSGTVTKFDKQSGWYRVEYEDGDSEDLDWSELEEVLLPLDT 113          
BLAST of XM_058884364.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:21512479-21513905 REVERSE LENGTH=271)

HSP 1 Score: 126.716 bits (317), Expect = 1.446e-36
Identity = 57/117 (48.72%), Postives = 83/117 (70.94%), Query Frame = 0
Query:    1 MEEDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSVFDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDTEDLDWLELKEVLRPMDV 117
            ME+    KQE+ +    ++ +PGEPAVVINGVP+      +++  + +S     G +G G+W  GR+++K F+G YYSG VT++DK++GWYRV+YEDGD+EDLDW EL+EVL P+D 
Sbjct:    1 MEDTGSIKQEAQSHPPGIFEIPGEPAVVINGVPDEPQTDCMIAKDEPIS----SGTVGSGEWLEGREVRKFFLGRYYSGTVTKFDKQSGWYRVEYEDGDSEDLDWSELEEVLLPLDT 113          
The following BLAST results are available for this feature:
BLAST of XM_058884364.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A9D4XVS9|A0A9D4XVS9_PEA1.086e-8889.44PTM/DIR17-like Tudor domain-containing protein OS=... [more]
tr|A0A2Z6MVH6|A0A2Z6MVH6_TRISU4.221e-6473.13Tudor domain-containing protein OS=Trifolium subte... [more]
tr|A0A1S2XSP1|A0A1S2XSP1_CICAR1.006e-6068.12Dirigent protein 17 isoform X1 OS=Cicer arietinum ... [more]
tr|A0A1S2XSM7|A0A1S2XSM7_CICAR1.898e-5969.23Dirigent protein 17 isoform X2 OS=Cicer arietinum ... [more]
tr|A0A2K3MP24|A0A2K3MP24_TRIPR1.010e-5869.57PTM/DIR17-like Tudor domain-containing protein OS=... [more]
tr|G7L0N7|G7L0N7_MEDTR2.002e-5467.44Lamin-B receptor of TUDOR domain protein OS=Medica... [more]
tr|A0A8B8LCX7|A0A8B8LCX7_ABRPR2.781e-5056.03Dirigent protein 17-like OS=Abrus precatorius OX=3... [more]
tr|A0A151TV05|A0A151TV05_CAJCA8.181e-5056.52PTM/DIR17-like Tudor domain-containing protein OS=... [more]
tr|G7L0N9|G7L0N9_MEDTR6.033e-4960.90Putative Tudor domain-containing protein OS=Medica... [more]
tr|I1JPH0|I1JPH0_SOYBN3.608e-4857.03PTM/DIR17-like Tudor domain-containing protein OS=... [more]
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BLAST of XM_058884364.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|F4J4N3|DIR17_ARATH1.397e-3548.72Dirigent protein 17 OS=Arabidopsis thaliana OX=370... [more]
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BLAST of XM_058884364.1 vs. Araport11
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
|1.446e-3648.72Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia villosa cv. AU Merit genome v1.0
Date Performed: 2024-08-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR047365PTM/DIR17-like, Tudor domainPFAMPF21743PTM_DIR17_Tudorcoord: 65..112
e-value: 2.8E-21
score: 86.3
IPR047365PTM/DIR17-like, Tudor domainCDDcd20401Tudor_AtPTM-likecoord: 64..112
e-value: 1.77899E-16
score: 66.8164
NoneNo IPR availableGENE3D2.30.30.140coord: 62..111
e-value: 2.1E-8
score: 35.6
NoneNo IPR availablePANTHERPTHR37384OS01G0835600 PROTEINcoord: 7..137

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVicVill.AUMerit.1.0.rna-XM_058884364.1 ID=drVicVill.AUMerit.1.0.rna-XM_058884364.1; Name=XM_058884364.1; organism=Vicia villosa; type=mRNA; length=429bp
ATGGAAGAGGACAAAGGAAATAAGCAGGAATCAAATGCTTTTGCGACTGA
GGTTTATACGGTGCCCGGAGAGCCTGCTGTTGTAATTAACGGTGTGCCTG
AGATAGTCGGCGCGAGCAGCATTGTCTCTTCCTGCGACACGTTGAGCGTC
TTTGACAAGGACGGGAATATGGGTTTGGGTGATTGGTTCGTAGGGAGGGA
TATCCAGAAGTTGTTTATGGGAAGCTATTACTCGGGGAAAGTAACCGAGT
ATGACAAAGAAAATGGATGGTACCGAGTCAAATACGAAGATGGTGACACA
GAGGATCTCGATTGGCTTGAATTGAAGGAGGTTCTGCGTCCTATGGATGT
TACCGTTTCGCTTAAGACGTTGGTGAACAAGGTTATTCGAAATCATACAA
AAAAATCAAAACATAAAGCAAGGAATTGA
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protein sequence of drVicVill.AUMerit.1.0.rna-XM_058884364.1

>drVicVill.AUMerit.1.0.rna-XM_058884364.1 ID=drVicVill.AUMerit.1.0.rna-XM_058884364.1; Name=drVicVill.AUMerit.1.0.rna-XM_058884364.1; organism=Vicia villosa; type=polypeptide; length=142bp
MEEDKGNKQESNAFATEVYTVPGEPAVVINGVPEIVGASSIVSSCDTLSV
FDKDGNMGLGDWFVGRDIQKLFMGSYYSGKVTEYDKENGWYRVKYEDGDT
EDLDWLELKEVLRPMDVTVSLKTLVNKVIRNHTKKSKHKARN
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mRNA from alignment at LG6:142532835..142534180-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVicVill.AUMerit.1.0.rna-XM_058884364.1 ID=drVicVill.AUMerit.1.0.rna-XM_058884364.1; Name=XM_058884364.1; organism=Vicia villosa; type=mRNA; length=1346bp; location=Sequence derived from: LG6:142532835..142534180- (Vicia villosa
TCACATTCTAGGGAAGGTCGTTTCTAACTTGCTTTTGCATATATACATAT TATCACCAACGAACCTTTTTCAGCCTCACCACTTCCACCATGGAATCTCT TTTACTCAAATCCATGTTAGTCCAGAACCACACATTACAGCAGCAATTTC CTTCAGTATCCATGGATTTATCATGGTTGATAGAGTTCCTCAAAGGCATG GTGAAACCAGTTTGCGCCACCGCAGTAGTGTTTCTTGCAGTAGCCTTGTC CTTCTCTCAGAAACTCGGTCTCGAAGTAGAGATGATTATTGCTATTCTTA GAGCTTTTATTCAACTCTCAATAATTGGTTTTGTTCTGCAATTCATCTTC AATCAAGAAAACTCCGGATGGATCCTCCTAGCATACCTTTTCATGGTATC TCTCTCATTCTCTTTATTTAGCCGCGCAGTTTGTTATCCGTTTGTCTGAA ATATTTATATAATCAGAGTAATATTTTTCAAAAAAAAACTCTTTAATTTG TTCAAGTTCTATATAATAAAGTTTCTCTGGTTGCTCAATTTGTTTCTGTA GGTATCTATTGCAGGTTATACAGCGGGTCAGCGCGCGAAACAAGTACCGC GAGGAAAATACGTAGCCGGAGCTTCAATTCTAACCGGAACTGCCATAACC ATGTTCGTTCTAGTAGCACTCAGCGTCTTCCCTTTCACTCCCAGATACAT AATCCCCGTCGCCGGGATGATGGTTGGAAATTCCATGACAGTAACCGGAG TAACCATGAAAAGACTCCGCGACGACATCAAAACTCAAATCAATTTGGTA CATACGAACTCAACTCATAAAATTTCATAGATAGAAACTATTTTATTTTT CTTTTAGAAAGTTGACATGAATTAAATTATGACAGGTTGAGACAGCATTG GCTCTTGGTGCAACCCCAAGACAAGCAACACATCAACAAGTGAAAAGGGC ACTGATTATAGCACTTTCTCCTGTGGTGGATAACACAAAAACAGTGGGTT TGATATCTCTTCCAGGGGCTATGACTGGTCTAATAATGGGAGGAGCTTCA CCTTTGGAAGCAATTCAGCTACAGATTGTGGTGATGAATATGATGATTGG AGCTGCAACTATTAGTAGTATAATGGCTACATACTTGTGTTGGCCTGCAT TTTTTACCAAGGCCTATCAATTGGAAACCAAAGTCTTTTCAACTTGATTC AGAAATTAATTCAACCCATCTAGATTTTCAAGTACCATCAAACAAATCTC AATTTCAGGGATGTAGCTAAAGTTTCCTTGTATATCTTTTAAGTTGTAAA ATTTTGATGTTAGGTGTATAACAATGGGATGTTGGGTTTTTGCCCA
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Coding sequence (CDS) from alignment at LG6:142532835..142534180-

>drVicVill.AUMerit.1.0.rna-XM_058884364.1 ID=drVicVill.AUMerit.1.0.rna-XM_058884364.1; Name=XM_058884364.1; organism=Vicia villosa; type=CDS; length=864bp; location=Sequence derived from: LG6:142532835..142534180- (Vicia villosa
ATGGAATCTCTTTTACTCAAATCCATGTTAGTCCAGAACCACACATTACA
GCAGCAATTTCCTTCAGTATCCATGGATTTATCATGGTTGATAGAGTTCC
TCAAAGGCATGGTGAAACCAGTTTGCGCCACCGCAGTAGTGTTTCTTGCA
GTAGCCTTGTCCTTCTCTCAGAAACTCGGTCTCGAAGTAGAGATGATTAT
TGCTATTCTTAGAGCTTTTATTCAACTCTCAATAATTGGTTTTGTTCTGC
AATTCATCTTCAATCAAGAAAACTCCGGATGGATCCTCCTAGCATACCTT
TTCATGGTATCTATTGCAGGTTATACAGCGGGTCAGCGCGCGAAACAAGT
ACCGCGAGGAAAATACGTAGCCGGAGCTTCAATTCTAACCGGAACTGCCA
TAACCATGTTCGTTCTAGTAGCACTCAGCGTCTTCCCTTTCACTCCCAGA
TACATAATCCCCGTCGCCGGGATGATGGTTGGAAATTCCATGACAGTAAC
CGGAGTAACCATGAAAAGACTCCGCGACGACATCAAAACTCAAATCAATT
TGGTTGAGACAGCATTGGCTCTTGGTGCAACCCCAAGACAAGCAACACAT
CAACAAGTGAAAAGGGCACTGATTATAGCACTTTCTCCTGTGGTGGATAA
CACAAAAACAGTGGGTTTGATATCTCTTCCAGGGGCTATGACTGGTCTAA
TAATGGGAGGAGCTTCACCTTTGGAAGCAATTCAGCTACAGATTGTGGTG
ATGAATATGATGATTGGAGCTGCAACTATTAGTAGTATAATGGCTACATA
CTTGTGTTGGCCTGCATTTTTTACCAAGGCCTATCAATTGGAAACCAAAG
TCTTTTCAACTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR047365Tudor_AtPTM-like