XM_058890254.1
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of XM_058890254.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4YG65|A0A9D4YG65_PEA (Mediator of RNA polymerase II transcription subunit 1 OS=Pisum sativum OX=3888 GN=KIW84_022382 PE=4 SV=1) HSP 1 Score: 1123.23 bits (2904), Expect = 0.000e+0 Identity = 576/620 (92.90%), Postives = 599/620 (96.61%), Query Frame = 0 Query: 1 MDRSEPTLVPEWLRSAGSVGGAGNSAQHFASSSNHTDSHSPSAVHNNRNRSSRTNSDFDSSRSVFLDRTSSSSYRRGSIINGSAKNAYSSFNRNHRDKDRDREKDRSNFGDHWDRDGSDPLANLFSGRIERDTLRRSQSMVTRKQGETLPRRVAADTKSGGSSNHNNGNDVLPGGGVGSSIQKAVFDKDFPSLGAEEKQVIAEIGRVSSPGLGATASQ-SLPVGSSALIGGEGWTSALAEVSSVSAQQTVTATSGSVSSTG---LNMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSKSKTAIRNAEMNVAAKSVPQQPSALHIASQSLRSVNAKVDVPKTSGKFIDLKSVVWENGASPTSKDVSNLTNYANNKLANQHAISSAAAPPPVKNPNNLKSPTERKPSPLDLKLGSTLDKKQSISQVKSRNDFFNLLKNKSATNSSTVLPDSGQMVSSPTLENSAELKRESVMPSASPQSAGNGAELTSNGNAHAHEKPCRISDDEEKDSISRATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPSTLKLCIEGMQPQLSKLFDSCASDLRGASAELNSSDPRSEA 616 MDRSEP LVPEWLRSAGSVGGAGNSAQHFASSSNHTDSHSPSAVHNNRNRSSRT SDFDSSRSVFLDR+SSSSYRRGSI NG+AK+AYSSFNRN+RDKDRDREKDRSNFGDHWDRDGSDPLANLFSGRIERDTLRRSQSMV+RKQGETLPRRVAADTKSGGSSNHNNGNDVL G VGSSIQKAVFDKDFPSLGAEEKQVIAE+GRVSSPGLGATASQ SLPVGSSALIGGEGWTSALA+V S+S QQTVTATSGSVSS+ LNMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSKSKTAIRNAEMNVA KSVPQQPS+LHIASQS+RSVNAKVDVPKTSGKFIDLKSVVWENGASPT+KDVSNLTNYANNKLANQHA++SAAAP PVKNPNNLKSPTERKP+PLDLKLGSTLDKKQSISQVKSRNDFFNLLKNKSATNSSTVLPDSGQ+VSSPTLENSAE+ RES M SASPQS G GAELTSNGN HAHEKPC+ISDDEEKDSISRATVYPDEEEAAFLRSLGWE+NSDEDEGLTEEEI+AFYQECKKLDPSTLK+CIEGMQPQLSKLFDSCASDLRGAS++LNSSDPRSEA Sbjct: 1 MDRSEPALVPEWLRSAGSVGGAGNSAQHFASSSNHTDSHSPSAVHNNRNRSSRTTSDFDSSRSVFLDRSSSSSYRRGSI-NGTAKHAYSSFNRNNRDKDRDREKDRSNFGDHWDRDGSDPLANLFSGRIERDTLRRSQSMVSRKQGETLPRRVAADTKSGGSSNHNNGNDVLSVGSVGSSIQKAVFDKDFPSLGAEEKQVIAEMGRVSSPGLGATASQQSLPVGSSALIGGEGWTSALADVPSISVQQTVTATSGSVSSSTSAGLNMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSKSKTAIRNAEMNVAMKSVPQQPSSLHIASQSVRSVNAKVDVPKTSGKFIDLKSVVWENGASPTAKDVSNLTNYANNKLANQHAVASAAAPTPVKNPNNLKSPTERKPAPLDLKLGSTLDKKQSISQVKSRNDFFNLLKNKSATNSSTVLPDSGQLVSSPTLENSAEVNRESAMLSASPQSVGTGAELTSNGNVHAHEKPCKISDDEEKDSISRATVYPDEEEAAFLRSLGWEDNSDEDEGLTEEEISAFYQECKKLDPSTLKICIEGMQPQLSKLFDSCASDLRGASSKLNSSDPRSEA 619
BLAST of XM_058890254.1 vs. ExPASy TrEMBL (2024)
Match: tr|G7K9W5|G7K9W5_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11436047 PE=4 SV=2) HSP 1 Score: 1007.67 bits (2604), Expect = 0.000e+0 Identity = 546/630 (86.67%), Postives = 570/630 (90.48%), Query Frame = 0 Query: 1 MDRSEPTLVPEWLRSAGSVGGAGNSAQHFASSSNHTDSHSPSAVHNNRNRSSRTNSDFDSSRSVFLDRTSSSSYRRGSIINGSAKNAYSSFNRNHRDKDRDREKDRSNFGDHWDRDGSDPLANLFSGRIERDTLRRSQSMVTRKQGETLPRRVAADTKSGGSSNHNNGNDVLPGGGVGSSIQKAVFDKDFPSLGAEEKQVIAEIGRVSSPGLGATASQSLPVGSSALIGGEGWTSALAEVSSV---------SAQQTVTATSGSVSST---GLNMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSKSKTAIRNAEMNVAAKSVPQQPSALHIASQSLRSVNAKVDVPKTSGKFIDLKSVVWENGASPTSKDVSNLTNYANNKLANQHAISSAAAPPPVKNPNNLKSPTERKPSPLDLKLGSTLDKKQSISQVKSRNDFFNLLKNKSATNSSTVLPDSGQMVSSPTLENSAELKRESVMPSASPQSAGNGAELTSNGNAHAH--EKPCRISDDEEKDSISRATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPSTLKLCIEGMQPQLSKLFDSCASDLRGASAELNSSDPRSEA 616 MDRSEP+LVPEWLRSAGSV GAGNSAQHFASSS+H DSHSPSA +NNRNRSS+ DFDSSRSVFLDRTSS+S RRGSI NGSAK+AYSSFNRNHRDKDRDREKDRSNFGDHWDRDGSDPL NLFSGRIERDTLRRS SMV+RKQGETLPRRVAADTKSGGSSNHNNGN L G VGSSIQKAVFDKDFPSLGA+EKQ IAEIGRVSSPGLGATASQSLPVGSSALIGGEGWTSALAEV SV SAQQT+ ATS SVSS+ GLNMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSK KTA+RNAEMNVA KS QQPSALHIASQS+R VNAKVDVPKTSGKF DLKSVVWENGASPTSKDVSN TNYAN+K ANQH ++SAAAP PV+NP+NL SP ERKP+ LDLKLGS LDKKQSISQVKSRNDFFNLLKNK+ATNSSTV PDSGQMVSSPTLE S E+ RESVMPSASPQS GN AE TSNGNAHAH E RISDD+EK+S RATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPS LKLCIEGMQPQLSKLFDSCAS+LRGASAELNSS+PRSEA Sbjct: 1 MDRSEPSLVPEWLRSAGSVVGAGNSAQHFASSSSHADSHSPSAANNNRNRSSKNTGDFDSSRSVFLDRTSSASSRRGSI-NGSAKHAYSSFNRNHRDKDRDREKDRSNFGDHWDRDGSDPLVNLFSGRIERDTLRRSHSMVSRKQGETLPRRVAADTKSGGSSNHNNGNGALSVGSVGSSIQKAVFDKDFPSLGADEKQGIAEIGRVSSPGLGATASQSLPVGSSALIGGEGWTSALAEVPSVIGSSSAGSSSAQQTIAATSVSVSSSTAAGLNMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSKPKTAVRNAEMNVATKSALQQPSALHIASQSVRIVNAKVDVPKTSGKFTDLKSVVWENGASPTSKDVSNPTNYANSKSANQHCVASAAAPTPVRNPSNLNSPRERKPASLDLKLGSALDKKQSISQVKSRNDFFNLLKNKTATNSSTVFPDSGQMVSSPTLEKSGEVNRESVMPSASPQSVGNAAEPTSNGNAHAHAHEVLSRISDDDEKNS--RATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPSALKLCIEGMQPQLSKLFDSCASNLRGASAELNSSEPRSEA 627
BLAST of XM_058890254.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3EGV1|A0A1S3EGV1_CICAR (Uncharacterized protein LOC101499239 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101499239 PE=4 SV=1) HSP 1 Score: 929.858 bits (2402), Expect = 0.000e+0 Identity = 507/613 (82.71%), Postives = 544/613 (88.74%), Query Frame = 0 Query: 1 MDRSEPTLVPEWLRSAGSVGGAGNSAQHFASSSNHTDSHSPSAVHNNRNRSSRTNSDFDSSRSVFLDRTSSSSYRRGSIINGSAKNAYSSFNRNHRDKDRDREKDRSNFGDHWDRDGSDPLANLFSGRIERD--TLRRSQSMVTRKQGETLPRRVAADTKSGGSSNHNNGNDVLPGGGVGSSIQKAVFDKDFPSLGAEEKQVIAEIGRVSSPGLGATASQSLPVGSSALIGGEGWTSALAEVSSV---------SAQQTVTATSGSVSSTG---LNMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSKSKTAIRNAEMNVAAKSVPQQPSALHIASQSLRSVNAKVDVPKTSGKFIDLKSVVWENGASPTSKDVSNLTNYANNKLANQHAISSAAAPPPVKNPNNLKSPTERKPSPLDLKLGSTLDKKQSISQVKSRNDFFNLLKNKSATNSSTVLPDSGQMVSSPTLENSAELKRESVMPSASPQSAGNGAELTSNGNAHAHEKPCRISDDEEKDSISRATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPSTLKLCIEGMQPQLSKLFDSCASD 599 MDRSEP+LVPEWLR+AGSV GAGNSAQHFASSS+H DSHSPSA NRNR S+ SDFDSSRSVFLDRTSSS+ RR S+IN SAK+AYSSFNRNHRDKDRDREKDRSNF DH D DGSDPLANL SGRIERD TLRRS SMV+RKQGE LPRRV++DTKSG SSNHNNGN V+ GG VGSSI KAVFDKDFPSLG EEKQ I EIGRVSSPGLGA ASQSLPV SSALIGGEGWTSALAEV SV S+QQTVT TSGSVSS+ LNMAEALAQAPS ARS+PQVSVKTQRLEELAIKQ RQLIPVTPSMPK L LNS EKSK KTA+RNAEMNV K+VPQQPSALHIA QS+RS+NAKVDVPKTSGKF DLKSVVWENGASPTSKDVSN TNYAN+K ANQHA++SAAAP PV+NPNNLKSPTERKPS LDLKLGSTLDKKQSISQVKSRNDFFNL+KNK++T+SST+LPDSGQMVSSP+LE S ++ RESVMPSASPQS GN AELT NGNAHAHE+ RISDDEEK+SISRA +YPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPSTLKLC +G+QP+LSKLFDS AS+ Sbjct: 1 MDRSEPSLVPEWLRTAGSVAGAGNSAQHFASSSSHADSHSPSAALYNRNRFSKNTSDFDSSRSVFLDRTSSSNSRR-SLINVSAKHAYSSFNRNHRDKDRDREKDRSNFIDHLDHDGSDPLANLLSGRIERDRDTLRRSHSMVSRKQGEILPRRVSSDTKSGASSNHNNGNGVISGGSVGSSIHKAVFDKDFPSLGGEEKQGIVEIGRVSSPGLGAGASQSLPVCSSALIGGEGWTSALAEVPSVIGSSSSGSLSSQQTVTVTSGSVSSSATSSLNMAEALAQAPSGARSSPQVSVKTQRLEELAIKQLRQLIPVTPSMPKTLVLNS-EKSKPKTAVRNAEMNVVTKNVPQQPSALHIAGQSVRSLNAKVDVPKTSGKFTDLKSVVWENGASPTSKDVSNPTNYANSKSANQHAVASAAAPTPVRNPNNLKSPTERKPSSLDLKLGSTLDKKQSISQVKSRNDFFNLIKNKTSTSSSTILPDSGQMVSSPSLEKSGDVNRESVMPSASPQSVGNEAELTRNGNAHAHEELSRISDDEEKNSISRAMIYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPSTLKLC-QGIQPKLSKLFDSYASN 610
BLAST of XM_058890254.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q7Y6F8|A0A3Q7Y6F8_CICAR (Uncharacterized protein LOC101499239 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101499239 PE=4 SV=1) HSP 1 Score: 926.006 bits (2392), Expect = 0.000e+0 Identity = 507/614 (82.57%), Postives = 544/614 (88.60%), Query Frame = 0 Query: 1 MDRSEPTLVPEWLRSAGSVGGAGNSAQHFASSSNHTDSHSPSAVHNNRNRSSRTNSDFDSSRSVFLDRTSSSSYRRGSIINGSAKNAYSSFNRNHRDKDRDREKDRSNFGDHWDRDGSDPLANLFSGRIERD--TLRRSQSMVTRKQGETLPRRVAADTKSGGSSNHNNGNDVLPGGGVGSSIQKAVFDKDFPSLGAEEKQVIAEIGRVSSPGLGATASQSLPVGSSALIGGEGWTSALAEVSSV---------SAQQTVTATSGSVSSTG---LNMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSKSKTAIRNAEMNVAAKSVPQQPSALHIASQSLRSVNAKVDVPKTSGKFIDLKSVVWENGASPTSKDVSNLTNYANNKLANQHAISSAAAPPPVKNPNNLKSPTERKPSPLDLKLGSTLDKKQSISQVKSRNDFFNLLKNKSATNSSTVLPDSGQMVSSPTLENSAELKRESVMPSASPQSAGNGAELTSNGNAHAHEKPCRISDDEEKDSISRATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQE-CKKLDPSTLKLCIEGMQPQLSKLFDSCASD 599 MDRSEP+LVPEWLR+AGSV GAGNSAQHFASSS+H DSHSPSA NRNR S+ SDFDSSRSVFLDRTSSS+ RR S+IN SAK+AYSSFNRNHRDKDRDREKDRSNF DH D DGSDPLANL SGRIERD TLRRS SMV+RKQGE LPRRV++DTKSG SSNHNNGN V+ GG VGSSI KAVFDKDFPSLG EEKQ I EIGRVSSPGLGA ASQSLPV SSALIGGEGWTSALAEV SV S+QQTVT TSGSVSS+ LNMAEALAQAPS ARS+PQVSVKTQRLEELAIKQ RQLIPVTPSMPK L LNS EKSK KTA+RNAEMNV K+VPQQPSALHIA QS+RS+NAKVDVPKTSGKF DLKSVVWENGASPTSKDVSN TNYAN+K ANQHA++SAAAP PV+NPNNLKSPTERKPS LDLKLGSTLDKKQSISQVKSRNDFFNL+KNK++T+SST+LPDSGQMVSSP+LE S ++ RESVMPSASPQS GN AELT NGNAHAHE+ RISDDEEK+SISRA +YPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQE CKKLDPSTLKLC +G+QP+LSKLFDS AS+ Sbjct: 1 MDRSEPSLVPEWLRTAGSVAGAGNSAQHFASSSSHADSHSPSAALYNRNRFSKNTSDFDSSRSVFLDRTSSSNSRR-SLINVSAKHAYSSFNRNHRDKDRDREKDRSNFIDHLDHDGSDPLANLLSGRIERDRDTLRRSHSMVSRKQGEILPRRVSSDTKSGASSNHNNGNGVISGGSVGSSIHKAVFDKDFPSLGGEEKQGIVEIGRVSSPGLGAGASQSLPVCSSALIGGEGWTSALAEVPSVIGSSSSGSLSSQQTVTVTSGSVSSSATSSLNMAEALAQAPSGARSSPQVSVKTQRLEELAIKQLRQLIPVTPSMPKTLVLNS-EKSKPKTAVRNAEMNVVTKNVPQQPSALHIAGQSVRSLNAKVDVPKTSGKFTDLKSVVWENGASPTSKDVSNPTNYANSKSANQHAVASAAAPTPVRNPNNLKSPTERKPSSLDLKLGSTLDKKQSISQVKSRNDFFNLIKNKTSTSSSTILPDSGQMVSSPSLEKSGDVNRESVMPSASPQSVGNEAELTRNGNAHAHEELSRISDDEEKNSISRAMIYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQEVCKKLDPSTLKLC-QGIQPKLSKLFDSYASN 611
BLAST of XM_058890254.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151RY93|A0A151RY93_CAJCA (Mediator of RNA polymerase II transcription subunit 1 OS=Cajanus cajan OX=3821 GN=KK1_030856 PE=4 SV=1) HSP 1 Score: 923.309 bits (2385), Expect = 0.000e+0 Identity = 483/629 (76.79%), Postives = 531/629 (84.42%), Query Frame = 0 Query: 1 MDRSEPTLVPEWLRSAGSVGGAGNSAQHFASSSNHTDSHSPSAVHNNRNRSSRTNSDFDSSRSVFLDRTSSSSYRRGSIINGSAKNAYSSFNRNHRDKDRDREKDRSNFGDHWDRDGSDPLANLFSGRIERDTLRRSQSMVTRKQGETLPRRVAADTKSGGSSNH-NNGNDVLPGGGVGSSIQKAVFDKDFPSLGAEEKQVIAEIGRVSSPGLGATASQSLPVGSSALIGGEGWTSALAEV---------SSVSAQQTVTATSGSVSST---GLNMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSKSKTAIRNAEMNVAAKSVPQQPSALHIASQSLRSVNAKVDVPKTSGKFIDLKSVVWENGASPTSKDVSNLTNYANNKLANQHAISSAAAPPPVKNPNNLKSPTERKPSPLDLKLGSTLDKKQSISQVKSRNDFFNLLKNKSATNSSTVLPDSGQMVSSPTLENSAELKRESVMPSASPQSAGNGAELTSNGNAHAHEKPCRISDDEEKDSISRATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPSTLKLCIEGMQPQLSKLFDSCASDLRGASAELNSSDPRSEA 616 MDRSEP LVPEWLRSAGSV GAG+SAQHFAS S++ DS S H++RNRSS+ SDFDS+RSVFL+RTSSS+ RR SI NGSAK+AYSSFNR+HRDKDRDREKDRSNF DHWD DGSDPLANLF GR+ERDTLRRS SMV+RKQ E +PRR A D+KSGGSS+H NN N +L G V SSIQKAVFDKDFPSLG EEKQ IAE+ RVSSPGLG ASQSLPVGSSALIGGEGWTSALAEV S+ QQTV TSGSV+S+ GLNMAEALAQ PSRARS PQV VKTQRLEELAIKQSRQLIPVTPSMPKA L SSEKSK KT IRNAEMNV KSV QQPSALH+ASQS+RSVNAKVD PKTSGKF DLKSVVWENGASPTSKDVSN TNY+N+K +QHA++S AA P++NPNNLKSPTERK + LDLKLGS LDKK SISQV+SRNDFFNL+K K+ NSS VLPDSG MVS PT+E S E+ R V P ASPQS GNG ELTSNGNAHAHE+ R SD+EEK+SI AT+YPDEEEAAFLRSLGWEEN+DEDEGLTEEEINAFYQECKKLDP+T KLC +GMQP+LSKLF+S AS+LRG+SAEL+SSDP SEA Sbjct: 1 MDRSEPALVPEWLRSAGSVAGAGSSAQHFASPSSNADS--TSVTHHSRNRSSKNASDFDSARSVFLERTSSSNSRRSSI-NGSAKHAYSSFNRSHRDKDRDREKDRSNFADHWDCDGSDPLANLFPGRMERDTLRRSHSMVSRKQSEVIPRRAAVDSKSGGSSHHQNNSNGILSGSNVSSSIQKAVFDKDFPSLGTEEKQGIAEVVRVSSPGLGGAASQSLPVGSSALIGGEGWTSALAEVPTIIGSSSTGSLPVQQTVNTTSGSVASSTTAGLNMAEALAQTPSRARSAPQVLVKTQRLEELAIKQSRQLIPVTPSMPKASVL-SSEKSKPKTGIRNAEMNVVTKSVAQQPSALHVASQSVRSVNAKVDAPKTSGKFTDLKSVVWENGASPTSKDVSNPTNYSNSKPGSQHAVASGAASAPLRNPNNLKSPTERKAASLDLKLGSALDKKHSISQVQSRNDFFNLIKKKTLMNSSVVLPDSGSMVSPPTMEKSDEVNRVIVSPPASPQSLGNGTELTSNGNAHAHEEVHRHSDNEEKESIPSATIYPDEEEAAFLRSLGWEENTDEDEGLTEEEINAFYQECKKLDPTTFKLC-QGMQPKLSKLFESYASNLRGSSAELSSSDPGSEA 624
BLAST of XM_058890254.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8JHU0|A0A8B8JHU0_ABRPR (Mediator of RNA polymerase II transcription subunit 1-like isoform X2 OS=Abrus precatorius OX=3816 GN=LOC113846689 PE=4 SV=1) HSP 1 Score: 914.835 bits (2363), Expect = 0.000e+0 Identity = 492/627 (78.47%), Postives = 540/627 (86.12%), Query Frame = 0 Query: 1 MDRSEPTLVPEWLRSAGSVGGAGNSAQHFASSSNHTDSHSPSAVHNNRNRSSRTNSDFDSSRSVFLDRTSSSSYRRGSIINGSAKNAYSSFNRNHRDKDRDREKDRSNFGDHWDRDGSDPLANLFSGRIERDTLRRSQSMVTRKQGETLPRRVAADTKSGGSSNHNNGNDVLPGGGVGSSIQKAVFDKDFPSLGAEEKQVIAEIGRVSSPGLGATASQSLPVGSSALIGGEGWTSALAEV---------SSVSAQQTVTATSGSVSST--GLNMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSKSKTAIRNAEMNVAAKSVPQQPSALHIASQSLRSVNAKVDVPKTSGKFIDLKSVVWENGASPTSKDVSNLTNYANNKLANQHAISSAAAPPPVKNPNNLKSPTERKPSPLDLKLGSTLDKKQSISQVKSRNDFFNLLKNKSATNSSTVLPDSGQMVSSPTLENSAELKRESVMPSASPQSAGNGAELTSNGNAHAHEKPCRISDDEEKDSISRATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPSTLKLCIEGMQPQLSKLFDSCASDLRGASAELNSSDPRSEA 616 M++SEP LVPEWLRSAGSV GAG SAQH ASSS HTDS PS H+ RNRSS+ SDFDSSRSVFL+R+SSS+ RR SI NGSAK+AYSSFNR+HRDKDRDR+KDRS FGDHWDRDGSDPLA+LFSGR+ERDTLRRS SMV+RKQ + +PRRVA DTKSGGS+N NNGN +L G V SSIQK VFDKDFPSLGAEEKQ IAE+GRVSSPGL ATASQSLPVGSSALIGGEGWTSALAEV S+S QQTVT T VSST LNMAEALAQ PSRARSTPQV VKTQRLEELAIKQSRQLIPVTPSMPKAL LNSSEKSK KT +RNAEMNV +K+VPQQPSALHI SQS+RSVNAKVD PKTSGKF DLKSVVWENG SPTSKDVSN TNY+N+K NQHA+SS AA P++NPNNLKS TERKP+ LD+KLGSTLDKK SISQV+SRNDFFNL+K K+ NSSTVLPDSG MVSSP +E S E+ RE V PSA+ QS GNGAELTSNGN H HE+ R+SD+EEK+SISRAT+YPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDP+TLK+C +GMQP LSKLF+S AS+LRG+SAE +SSDP SEA Sbjct: 1 MEKSEPALVPEWLRSAGSVAGAGGSAQHSASSSTHTDS--PSVAHHARNRSSKNASDFDSSRSVFLERSSSSNSRRSSI-NGSAKHAYSSFNRSHRDKDRDRDKDRSTFGDHWDRDGSDPLASLFSGRMERDTLRRSHSMVSRKQSDVIPRRVAVDTKSGGSTNQNNGNGILSVGNVSSSIQKVVFDKDFPSLGAEEKQGIAEVGRVSSPGLTATASQSLPVGSSALIGGEGWTSALAEVPTMIGSSSTGSLSVQQTVT-TGSVVSSTAAALNMAEALAQTPSRARSTPQVLVKTQRLEELAIKQSRQLIPVTPSMPKALVLNSSEKSKPKTTVRNAEMNVVSKNVPQQPSALHITSQSVRSVNAKVDAPKTSGKFTDLKSVVWENGVSPTSKDVSNPTNYSNSKSVNQHAVSSTAASAPMRNPNNLKSSTERKPA-LDVKLGSTLDKKHSISQVQSRNDFFNLIKKKTLMNSSTVLPDSGPMVSSPAIEKSDEVNREIVCPSANLQSLGNGAELTSNGNVHTHEEVHRLSDNEEKESISRATIYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPTTLKVC-QGMQPNLSKLFESYASNLRGSSAESSSSDPGSEA 621
BLAST of XM_058890254.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371FIG3|A0A371FIG3_MUCPR (Mediator of RNA polymerase II transcription subunit 1 (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_41879 PE=4 SV=1) HSP 1 Score: 912.138 bits (2356), Expect = 0.000e+0 Identity = 477/629 (75.83%), Postives = 533/629 (84.74%), Query Frame = 0 Query: 1 MDRSEPTLVPEWLRSAGSVGGAGNSAQHFASSSNHTDSHSPSAVHNNRNRSSRTNSDFDSSRSVFLDRTSSSSYRRGSIINGSAKNAYSSFNRNHRDKDRDREKDRSNFGDHWDRDGSDPLANLFSGRIERDTLRRSQSMVTRKQGETLPRRVAADTKSGGSSNHNNGNDVLPGGGVGSSIQKAVFDKDFPSLGAEEKQVIAEIGRVSSPGLGATASQSLPVGSSALIGGEGWTSALAEV---------SSVSAQQTVTATSGSVSST---GLNMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSKSKTAIRNAEMNVAAKSVPQQPSALHIASQSLRSVNAKVDVPKTSGKFIDLKSVVWENGASPTSKDVSNLTNYANNKLANQHAISSAAAPP-PVKNPNNLKSPTERKPSPLDLKLGSTLDKKQSISQVKSRNDFFNLLKNKSATNSSTVLPDSGQMVSSPTLENSAELKRESVMPSASPQSAGNGAELTSNGNAHAHEKPCRISDDEEKDSISRATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPSTLKLCIEGMQPQLSKLFDSCASDLRGASAELNSSDPRSEA 616 M+RSEP LVPEWLRSAGSV GAG+SAQHF SS++ A H+ RNRSS+ SDFDS+RSVFL+RTSS++ RR S NGSAK+AYSSFNR+HRDK+RDREKDRS+FGDHWD DGSDPLANLFSGR+ERDTLRRS SM++RKQ E +PRRVA DTKSGGSS+ NN N +L G V SSIQKAVFDKDFPSLG EEKQ IAE+ RVSSPGLGA+ SQSLPVGSSALIGGEGWTSALAEV S+S TV SGSV+S+ LNMAEALAQ PSRARSTPQV VKTQRLEELAIKQSRQLIPVTPSMPK ++L SSEKSK KTAIRN+EMNV KSVPQQPSALHIA+QS+RSVNAKVD PKTSGKF DLKSVVWENG SPTSKDVSN TNY+N+K NQHA++SAAA P++NPNNLKSPTERKP+ LDLKLGST DKKQSISQV+SRNDFFNL+K K+ NSS VLPDSG MVSSPT+E S E+ RE V PSASPQS GNG EL SNGNAHAHE+ R+SD+EEK+SI AT+YP+EEEAAFLRSLGWEENSDEDEGLTEEEINAFYQEC+K+D STLKLC +GMQP+LSKL +S AS+ RG+SAEL+SSDP SEA Sbjct: 1 MERSEPALVPEWLRSAGSVAGAGSSAQHFTSSTSTHTDSPSVA-HHARNRSSKNASDFDSARSVFLERTSSANSRRSST-NGSAKHAYSSFNRSHRDKERDREKDRSSFGDHWDCDGSDPLANLFSGRMERDTLRRSHSMISRKQSEVIPRRVAVDTKSGGSSHQNNSNGILSGSNVSSSIQKAVFDKDFPSLGTEEKQGIAEVVRVSSPGLGASVSQSLPVGSSALIGGEGWTSALAEVPTIIGSSSTGSLSVPLTVNTPSGSVASSTTASLNMAEALAQTPSRARSTPQVLVKTQRLEELAIKQSRQLIPVTPSMPK-VSLLSSEKSKPKTAIRNSEMNVVTKSVPQQPSALHIANQSVRSVNAKVDAPKTSGKFTDLKSVVWENGVSPTSKDVSNPTNYSNSKPGNQHAVASAAASAAPLRNPNNLKSPTERKPASLDLKLGSTFDKKQSISQVQSRNDFFNLIKKKTLMNSSAVLPDSGPMVSSPTMEKSDEVNRELVSPSASPQSLGNGTELISNGNAHAHEEVHRLSDNEEKESIPSATIYPEEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECQKIDQSTLKLC-QGMQPKLSKLLESYASNWRGSSAELSSSDPGSEA 625
BLAST of XM_058890254.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8JHT5|A0A8B8JHT5_ABRPR (Mediator of RNA polymerase II transcription subunit 1-like isoform X1 OS=Abrus precatorius OX=3816 GN=LOC113846689 PE=4 SV=1) HSP 1 Score: 910.598 bits (2352), Expect = 0.000e+0 Identity = 492/628 (78.34%), Postives = 540/628 (85.99%), Query Frame = 0 Query: 1 MDRSEPTLVPEWLRSAGSVGGAGNSAQHFASSSNHTDSHSPSAVHNNRNRSSRTNSDFDSSRSVFLDRTSSSSYRRGSIINGSAKNAYSSFNRNHRDKDRDREKDRSNFGDHWDRDGSDPLANLFSGRIERDTLRRSQSMVTRKQGETLPRRVAADTKSGGSSNHNNGNDVLPGGGVGSSIQKAVFDKDFPSLGAEEKQVIAEIGRVSSPGLGATASQSLPVGSSALIGGEGWTSALAEV---------SSVSAQQTVTATSGSVSST--GLNMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSKSKTAIRNAEMNVAAKSVPQQPSALHIASQSLRSVNAKVDVPKTSGKFIDLKSVVWENGASPTSKDVSNLTNYANNKLANQHAISSAAAPPPVKNPNNLKSPTERKPSPLDLKLGSTLDKKQSISQVKSRNDFFNLLKNKSATNSSTVLPDSGQMVSSPTLENSAELKRESVMPSASPQSAGNGAELTSNGNAHAHEKPCRISDDEEKDSISRATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQE-CKKLDPSTLKLCIEGMQPQLSKLFDSCASDLRGASAELNSSDPRSEA 616 M++SEP LVPEWLRSAGSV GAG SAQH ASSS HTDS PS H+ RNRSS+ SDFDSSRSVFL+R+SSS+ RR SI NGSAK+AYSSFNR+HRDKDRDR+KDRS FGDHWDRDGSDPLA+LFSGR+ERDTLRRS SMV+RKQ + +PRRVA DTKSGGS+N NNGN +L G V SSIQK VFDKDFPSLGAEEKQ IAE+GRVSSPGL ATASQSLPVGSSALIGGEGWTSALAEV S+S QQTVT T VSST LNMAEALAQ PSRARSTPQV VKTQRLEELAIKQSRQLIPVTPSMPKAL LNSSEKSK KT +RNAEMNV +K+VPQQPSALHI SQS+RSVNAKVD PKTSGKF DLKSVVWENG SPTSKDVSN TNY+N+K NQHA+SS AA P++NPNNLKS TERKP+ LD+KLGSTLDKK SISQV+SRNDFFNL+K K+ NSSTVLPDSG MVSSP +E S E+ RE V PSA+ QS GNGAELTSNGN H HE+ R+SD+EEK+SISRAT+YPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQE CKKLDP+TLK+C +GMQP LSKLF+S AS+LRG+SAE +SSDP SEA Sbjct: 1 MEKSEPALVPEWLRSAGSVAGAGGSAQHSASSSTHTDS--PSVAHHARNRSSKNASDFDSSRSVFLERSSSSNSRRSSI-NGSAKHAYSSFNRSHRDKDRDRDKDRSTFGDHWDRDGSDPLASLFSGRMERDTLRRSHSMVSRKQSDVIPRRVAVDTKSGGSTNQNNGNGILSVGNVSSSIQKVVFDKDFPSLGAEEKQGIAEVGRVSSPGLTATASQSLPVGSSALIGGEGWTSALAEVPTMIGSSSTGSLSVQQTVT-TGSVVSSTAAALNMAEALAQTPSRARSTPQVLVKTQRLEELAIKQSRQLIPVTPSMPKALVLNSSEKSKPKTTVRNAEMNVVSKNVPQQPSALHITSQSVRSVNAKVDAPKTSGKFTDLKSVVWENGVSPTSKDVSNPTNYSNSKSVNQHAVSSTAASAPMRNPNNLKSSTERKPA-LDVKLGSTLDKKHSISQVQSRNDFFNLIKKKTLMNSSTVLPDSGPMVSSPAIEKSDEVNREIVCPSANLQSLGNGAELTSNGNVHTHEEVHRLSDNEEKESISRATIYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQEVCKKLDPTTLKVC-QGMQPNLSKLFESYASNLRGSSAESSSSDPGSEA 622
BLAST of XM_058890254.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8JHT9|A0A8B8JHT9_ABRPR (Mediator of RNA polymerase II transcription subunit 1-like isoform X3 OS=Abrus precatorius OX=3816 GN=LOC113846689 PE=4 SV=1) HSP 1 Score: 906.36 bits (2341), Expect = 0.000e+0 Identity = 488/627 (77.83%), Postives = 536/627 (85.49%), Query Frame = 0 Query: 1 MDRSEPTLVPEWLRSAGSVGGAGNSAQHFASSSNHTDSHSPSAVHNNRNRSSRTNSDFDSSRSVFLDRTSSSSYRRGSIINGSAKNAYSSFNRNHRDKDRDREKDRSNFGDHWDRDGSDPLANLFSGRIERDTLRRSQSMVTRKQGETLPRRVAADTKSGGSSNHNNGNDVLPGGGVGSSIQKAVFDKDFPSLGAEEKQVIAEIGRVSSPGLGATASQSLPVGSSALIGGEGWTSALAEV---------SSVSAQQTVTATSGSVSST--GLNMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSKSKTAIRNAEMNVAAKSVPQQPSALHIASQSLRSVNAKVDVPKTSGKFIDLKSVVWENGASPTSKDVSNLTNYANNKLANQHAISSAAAPPPVKNPNNLKSPTERKPSPLDLKLGSTLDKKQSISQVKSRNDFFNLLKNKSATNSSTVLPDSGQMVSSPTLENSAELKRESVMPSASPQSAGNGAELTSNGNAHAHEKPCRISDDEEKDSISRATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPSTLKLCIEGMQPQLSKLFDSCASDLRGASAELNSSDPRSEA 616 M++SEP LVPEWLRSAGSV GAG SAQH ASSS HT H+ RNRSS+ SDFDSSRSVFL+R+SSS+ RR SI NGSAK+AYSSFNR+HRDKDRDR+KDRS FGDHWDRDGSDPLA+LFSGR+ERDTLRRS SMV+RKQ + +PRRVA DTKSGGS+N NNGN +L G V SSIQK VFDKDFPSLGAEEKQ IAE+GRVSSPGL ATASQSLPVGSSALIGGEGWTSALAEV S+S QQTVT T VSST LNMAEALAQ PSRARSTPQV VKTQRLEELAIKQSRQLIPVTPSMPKAL LNSSEKSK KT +RNAEMNV +K+VPQQPSALHI SQS+RSVNAKVD PKTSGKF DLKSVVWENG SPTSKDVSN TNY+N+K NQHA+SS AA P++NPNNLKS TERKP+ LD+KLGSTLDKK SISQV+SRNDFFNL+K K+ NSSTVLPDSG MVSSP +E S E+ RE V PSA+ QS GNGAELTSNGN H HE+ R+SD+EEK+SISRAT+YPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDP+TLK+C +GMQP LSKLF+S AS+LRG+SAE +SSDP SEA Sbjct: 1 MEKSEPALVPEWLRSAGSVAGAGGSAQHSASSSTHT-------AHHARNRSSKNASDFDSSRSVFLERSSSSNSRRSSI-NGSAKHAYSSFNRSHRDKDRDRDKDRSTFGDHWDRDGSDPLASLFSGRMERDTLRRSHSMVSRKQSDVIPRRVAVDTKSGGSTNQNNGNGILSVGNVSSSIQKVVFDKDFPSLGAEEKQGIAEVGRVSSPGLTATASQSLPVGSSALIGGEGWTSALAEVPTMIGSSSTGSLSVQQTVT-TGSVVSSTAAALNMAEALAQTPSRARSTPQVLVKTQRLEELAIKQSRQLIPVTPSMPKALVLNSSEKSKPKTTVRNAEMNVVSKNVPQQPSALHITSQSVRSVNAKVDAPKTSGKFTDLKSVVWENGVSPTSKDVSNPTNYSNSKSVNQHAVSSTAASAPMRNPNNLKSSTERKPA-LDVKLGSTLDKKHSISQVQSRNDFFNLIKKKTLMNSSTVLPDSGPMVSSPAIEKSDEVNREIVCPSANLQSLGNGAELTSNGNVHTHEEVHRLSDNEEKESISRATIYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPTTLKVC-QGMQPNLSKLFESYASNLRGSSAESSSSDPGSEA 616
BLAST of XM_058890254.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2R1W5|A0A0B2R1W5_GLYSO (Mediator of RNA polymerase II transcription subunit 1 OS=Glycine soja OX=3848 GN=glysoja_025146 PE=4 SV=1) HSP 1 Score: 895.19 bits (2312), Expect = 0.000e+0 Identity = 478/628 (76.11%), Postives = 530/628 (84.39%), Query Frame = 0 Query: 1 MDRSEPTLVPEWLRSAGSVGGAGNSAQHFASSSNHTDSHSPSAVHNNRNRSSRTNSDFDSSRSVFLDRTSSSSYRRGSIINGSAKNAYSSFNRNHRDKDRDREKDRSNFGDHWDRDGSDPLANLFSGRIERDTLRRSQSMVTRKQGETLPRRVAADTKSGGSSNHNNGNDVLPGGGVGSSIQKAVFDKDFPSLGAEEKQVIAEIGRVSSPGLGATASQSLPVGSSALIGGEGWTSALAEV---------SSVSAQQTVTATSGSV---SSTGLNMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSKSKTAIRNAEMNVAAKSVPQQPSALHIASQSLRSVNAKVDVPKTSGKFIDLKSVVWENGASPTSKDVSNLTNYANNKLANQHAISSAAAPPPVKNPNNLKSPTERKPSPLDLKLGSTLDKKQSISQVKSRNDFFNLLKNKSATNSSTVLPDSGQMVSSPTLENSAELKRESVMPSASPQSAGNGAELTSNGNAHAHEKPCRISDDEEKDSISRATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPSTLKLCIEGMQPQLSKLFDSCASDLRGASAELNSSDPRSEA 616 M+RSEP LVPEWLRSAGSV GAG+SAQ FASSS HTDS S H++RNRSS+ SDFDS+RSVFL+RTSSS+ RR SI NGSAK+AYSSFNR+HRDKDRDREKDRS+FGDHWD DGSDPLANLF GR+ERDTLRRS SMV+RKQ E +PRRVA DTKSGGS + NN N +L G V SSIQKAVFDKDFPSL EEKQ IAE+ RVSSPGLGA ASQSLPVGSSALIGGEGWTSALAEV S+S QQTV TSGSV ++ GLNMAEALAQ PSRARS PQV VKTQRLEELAIKQSRQLIPVTPSMPKA ++++SEKSK KTAIRNA+MNV K+VPQQPSALHIASQS+RSVNAKVD PKTSGKF DLKSVVWENGASPTSKDVSN TNY+N+K NQHA++S AA P++NPNNLKSPTERKP+ +DLKLGS L+KK SISQV+SRNDFFNL+K K+ N S VLPDSG MVSSP +E S E+ RE V PSASPQS GNG ELTSNG HAHE RISD+EEK+S T+YP+EEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDP+ KL +GMQP+LSKLF+S AS+LR +SAEL+SSDP SEA Sbjct: 1 MERSEPALVPEWLRSAGSVAGAGSSAQQFASSSGHTDSLS--VAHHSRNRSSKNGSDFDSARSVFLERTSSSNSRRSSI-NGSAKHAYSSFNRSHRDKDRDREKDRSSFGDHWDSDGSDPLANLFPGRMERDTLRRSHSMVSRKQSEVIPRRVAVDTKSGGS-HQNNSNGILSGSNVSSSIQKAVFDKDFPSLSTEEKQGIAEVVRVSSPGLGAAASQSLPVGSSALIGGEGWTSALAEVPAIIGSSSTGSLSVQQTVNTTSGSVAPSTTAGLNMAEALAQTPSRARSAPQVLVKTQRLEELAIKQSRQLIPVTPSMPKA-SVHNSEKSKPKTAIRNADMNVVTKTVPQQPSALHIASQSVRSVNAKVDTPKTSGKFTDLKSVVWENGASPTSKDVSNPTNYSNSKPGNQHAVASGAASAPLRNPNNLKSPTERKPTSMDLKLGSNLEKKHSISQVQSRNDFFNLIKKKTLMNCSAVLPDSGPMVSSPAMEKSGEVNREIVNPSASPQSLGNGTELTSNG-THAHEVVHRISDNEEKESNPSVTIYPEEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPTAFKLS-QGMQPKLSKLFESYASNLRESSAELSSSDPGSEA 621
BLAST of XM_058890254.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:14027594-14029711 REVERSE LENGTH=581) HSP 1 Score: 387.111 bits (993), Expect = 4.277e-127 Identity = 280/596 (46.98%), Postives = 368/596 (61.74%), Query Frame = 0 Query: 1 MDRSEPTLVPEWLRSAGSVGGAGNSAQHFASSSNHTDSHSPSAVHNNRNRSSRTNSDFDSSRSVFLDRTSSSSYRRGSIINGSAKNAYSSFN--RNHRDKDRDREKDRSNFGDHWDRDGSDPLANLFSGRIERDTLRRSQSMVTRKQGETLPRRVAADTKSGGSSNHNNGNDVLPGGGVGSSIQKAVFDKDFPSLGAEEKQVIAEIGRVSSPGLGATASQSLPVGSSALIGGEGWTSALAEVSSVSAQQTVTATSGSVSS--------------TGLNMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSKSKTAIRNAEMNVA-AKSVPQQPSALHIASQSLRSVNAKVDVPKTSGKFIDLKSVVWENGASPTSKDVSNLTNYANNKLANQHAISSAAAP--PPVKNPNNLKSPTERK-PSPLDLKLGSTLDKKQSISQVKSRNDFFNLLKNK-SATNSSTVLPDSGQMVSSPTLENSAELKRESVMPSASPQSAGNGAELTSNGNAHAHEKPCRISDDEEKDSISRATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDP 575 MD+ E +L PEWLRS+G G G+S SSS+H+DS S +N+RNR+SR+ SD DS S FLDR+SS++ RRGS NGSAK+AYSSFN R+ RDKDR R+KDR ++ D WD D S PL + +GR + D LRRS SMVTRKQGE L R + +GGSSN NGN +L G +G+S Q+ FDKDFPSLGAEEKQ ++ RVSSPG+ + Q+LPVG+SALIGGEGWTSALAEV +V + A +GS++S +GLNMAEAL QAP+R + PQ SVKTQRLE+LAIKQSRQLIPV PS PK L+LNSS+KSK+K +R E +A +++ QQP+ L + QS S K + K + LK ENG S + S N N + A+ +S+ + PV++ N SP E K S + G T++KK S +Q +SR+ F++ LK K +A+ S T P S +S ++E ++ + S A +G E+T + +H S AT PDEEEA FLRSLGW EN+ E E LTEEEI++F ++ K+L P Sbjct: 1 MDKGEHSLAPEWLRSSGHASGGGSSNHLLVSSSSHSDSAS--LQYNSRNRNSRSKSDVDSIHSPFLDRSSSTNSRRGSS-NGSAKHAYSSFNFNRSQRDKDRSRDKDRVSYVDPWDLDTSIPLRTILTGR-DPDPLRRSHSMVTRKQGEHLSRGLTVGLNNGGSSNSYNGNGLLSGPSIGNSFQRTGFDKDFPSLGAEEKQNGQDVVRVSSPGISSVV-QNLPVGNSALIGGEGWTSALAEVPNVIEK----ACTGSLTSPKANAVSAGTLTGPSGLNMAEALVQAPARTHTPPQGSVKTQRLEDLAIKQSRQLIPVVPSAPKGLSLNSSDKSKTKQVVRTGETCLAPSRNALQQPAVLLGSFQSNPSGQIKPE-----KKLLVLKP-ARENGVSAVKESGSPSAN-TNTRAASSQLMSNTQSTQSAPVRSTN---SPKELKGASAFSMISGQTIEKKPSAAQAQSRSAFYSALKQKQTASTSITTDPVSSSTSASSSVEVKLNSSKDLIASDPSSSQATSGVEVTDSVQVASH------------TSGFEATDTPDEEEAQFLRSLGWVENNGE-EYLTEEEIDSFLEQYKELRP 564
BLAST of XM_058890254.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:5411023-5413016 FORWARD LENGTH=551) HSP 1 Score: 302.753 bits (774), Expect = 4.828e-95 Identity = 232/596 (38.93%), Postives = 328/596 (55.03%), Query Frame = 0 Query: 1 MDRSEPTLVPEWLRSAGSVGGAGNSAQHFASSSNHTDSHSPSAVHNNRNRSSRTNSDFDSSRSVFLDRTSSSSYRRGSIINGSAKNAYSSFN--RNHRDKDRDREKDRSNFGDHWDRDGSDPLANLFSGRIERDTLRRSQSMVTRKQGETLPRRVAADTKSGGSSNHNNGNDVLPGGGVGSSIQKAVFDKDFPSLGAEEKQVIAEIGRVSSPGLGATASQSLPVGSSALIGGEGWTSALAEVSSVSAQQTVTATSGSVSSTGL-------NMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSKSKTAIRNAEMNVAAKSVPQQPSALHIASQSLRSVNAKVDVPKTSGKFIDLKSV----VWENGASPTSKDVSNLTNYANNKLANQHAISSAAAPPPVKNPNNLKSPTERKPSPLDLKLGSTLDKKQSISQVKSRNDFFNLLKNKSATNSSTVLPDSGQMVSSPTLENSAELKRESVMPSASPQSAGNGAELTSNGNAHAHEKPCRISDDEEKDSISRATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPSTL-KLCI 582 M++ EP+LVPEWLRS+ SS++ +DS + N++NR++R+ SD DS S FLDR+SS++ RRGS NGS K+AYSSFN R++RDKDR REKDR ++ D WD D S P GR E + LRRS SM TRKQG L + K+GG+ N NG+ +LPG S ++ F+KDFP L EE+ ++ R+SSPG TA QSL V + ALI GEGWTSALAEV +V + + +V ++ NMAEAL QAP R + PQ Q LE+ AI+QSRQLIPV PS PK NSS+KSK+K R+ E +A+ QQ S++ + +++S P T+ K + LK V G+ P S+ ++ A + Q S V++ N P + + + +++ G +KK S++Q +SR+ F++ LK K+ TN ST + + S ++E A +E V S A E+ E ++S+ E+ S + V PD +EAAFL+SLGW+EN ++ T EE+ + CKK PS L KL I Sbjct: 1 MEKREPSLVPEWLRSS-------GHGSGVGSSNSLSDS-----LRNSKNRNARSRSDADSVGSPFLDRSSSTNTRRGSS-NGSTKHAYSSFNFNRSNRDKDRSREKDRMSYMDPWDNDSSMPFGTFLIGRGE-EPLRRSHSMTTRKQGNHLAQGFTVGYKNGGNINTFNGHGILPGTSPVKSSKRMGFNKDFPLLRGEERNGGPDVVRISSPGRSPTA-QSLSVANPALIIGEGWTSALAEVPNVIEKSGGAESHANVGNSATLSGPACRNMAEALVQAPGRTGTPPQA----QTLEDRAIRQSRQLIPVVPSAPKGSVHNSSDKSKTKPMFRSGETGLASSRNTQQQSSVMLG--NMQSNPGSQIKPDTTKKLVILKPARENGVVAGGSPPNSRVAASQPTTAP---STQFTAS-------VRSTNG---PRDLRGASVNMLAGKAAEKKLSLAQTQSRHAFYSALKQKTCTNISTDPSKTSSCILS-SVEEQANSSKELVASDPSSPQAAERDEIM--------ESVEKVSNVAERISRFESAVRPDPKEAAFLKSLGWDENDSDEYTHTMEEMREW---CKKFKPSLLQKLPI 550
BLAST of XM_058890254.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:5411023-5412917 FORWARD LENGTH=548) HSP 1 Score: 295.434 bits (755), Expect = 3.347e-92 Identity = 224/586 (38.23%), Postives = 322/586 (54.95%), Query Frame = 0 Query: 1 MDRSEPTLVPEWLRSAGSVGGAGNSAQHFASSSNHTDSHSPSAVHNNRNRSSRTNSDFDSSRSVFLDRTSSSSYRRGSIINGSAKNAYSSFN--RNHRDKDRDREKDRSNFGDHWDRDGSDPLANLFSGRIERDTLRRSQSMVTRKQGETLPRRVAADTKSGGSSNHNNGNDVLPGGGVGSSIQKAVFDKDFPSLGAEEKQVIAEIGRVSSPGLGATASQSLPVGSSALIGGEGWTSALAEVSSVSAQQTVTATSGSVSSTGL-------NMAEALAQAPSRARSTPQVSVKTQRLEELAIKQSRQLIPVTPSMPKALALNSSEKSKSKTAIRNAEMNVAAKSVPQQPSALHIASQSLRSVNAKVDVPKTSGKFIDLKSV----VWENGASPTSKDVSNLTNYANNKLANQHAISSAAAPPPVKNPNNLKSPTERKPSPLDLKLGSTLDKKQSISQVKSRNDFFNLLKNKSATNSSTVLPDSGQMVSSPTLENSAELKRESVMPSASPQSAGNGAELTSNGNAHAHEKPCRISDDEEKDSISRATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKL 573 M++ EP+LVPEWLRS+ SS++ +DS + N++NR++R+ SD DS S FLDR+SS++ RRGS NGS K+AYSSFN R++RDKDR REKDR ++ D WD D S P GR E + LRRS SM TRKQG L + K+GG+ N NG+ +LPG S ++ F+KDFP L EE+ ++ R+SSPG TA QSL V + ALI GEGWTSALAEV +V + + +V ++ NMAEAL QAP R + PQ Q LE+ AI+QSRQLIPV PS PK NSS+KSK+K R+ E +A+ QQ S++ + +++S P T+ K + LK V G+ P S+ ++ A + Q S V++ N P + + + +++ G +KK S++Q +SR+ F++ LK K+ TN ST + + S ++E A +E V S A E+ E ++S+ E+ S + V PD +EAAFL+SLGW+EN ++ T EE+ + ++ L Sbjct: 1 MEKREPSLVPEWLRSS-------GHGSGVGSSNSLSDS-----LRNSKNRNARSRSDADSVGSPFLDRSSSTNTRRGSS-NGSTKHAYSSFNFNRSNRDKDRSREKDRMSYMDPWDNDSSMPFGTFLIGRGE-EPLRRSHSMTTRKQGNHLAQGFTVGYKNGGNINTFNGHGILPGTSPVKSSKRMGFNKDFPLLRGEERNGGPDVVRISSPGRSPTA-QSLSVANPALIIGEGWTSALAEVPNVIEKSGGAESHANVGNSATLSGPACRNMAEALVQAPGRTGTPPQA----QTLEDRAIRQSRQLIPVVPSAPKGSVHNSSDKSKTKPMFRSGETGLASSRNTQQQSSVMLG--NMQSNPGSQIKPDTTKKLVILKPARENGVVAGGSPPNSRVAASQPTTAP---STQFTAS-------VRSTNG---PRDLRGASVNMLAGKAAEKKLSLAQTQSRHAFYSALKQKTCTNISTDPSKTSSCILS-SVEEQANSSKELVASDPSSPQAAERDEIM--------ESVEKVSNVAERISRFESAVRPDPKEAAFLKSLGWDENDSDEYTHTMEEMREWVKDTTTL 543 The following BLAST results are available for this feature:
BLAST of XM_058890254.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of XM_058890254.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of XM_058890254.1 vs. Araport11
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs arabidopsis Araport11) Total hits: 3
InterPro
Analysis Name: InterProScan Analysis for Vicia villosa cv. AU Merit genome v1.0
Date Performed: 2024-08-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >drVicVill.AUMerit.1.0.rna-XM_058890254.1 ID=drVicVill.AUMerit.1.0.rna-XM_058890254.1; Name=XM_058890254.1; organism=Vicia villosa; type=mRNA; length=1851bpback to top protein sequence of drVicVill.AUMerit.1.0.rna-XM_058890254.1 >drVicVill.AUMerit.1.0.rna-XM_058890254.1 ID=drVicVill.AUMerit.1.0.rna-XM_058890254.1; Name=drVicVill.AUMerit.1.0.rna-XM_058890254.1; organism=Vicia villosa; type=polypeptide; length=616bpback to top mRNA from alignment at LG7:56942333..56943043- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>drVicVill.AUMerit.1.0.rna-XM_058890254.1 ID=drVicVill.AUMerit.1.0.rna-XM_058890254.1; Name=XM_058890254.1; organism=Vicia villosa; type=mRNA; length=711bp; location=Sequence derived from: LG7:56942333..56943043- (Vicia villosaback to top Coding sequence (CDS) from alignment at LG7:56942333..56943043- >drVicVill.AUMerit.1.0.rna-XM_058890254.1 ID=drVicVill.AUMerit.1.0.rna-XM_058890254.1; Name=XM_058890254.1; organism=Vicia villosa; type=CDS; length=711bp; location=Sequence derived from: LG7:56942333..56943043- (Vicia villosaback to top |