XM_058915928.1

Transcript Overview
NameXM_058915928.1
Unique NamedrVicVill.AUMerit.1.0.rna-XM_058915928.1
TypemRNA
OrganismVicia villosa (vetch)
Sequence length372
References
External references for this mRNA
DatabaseAccession
GeneID131645255
GenBankXM_058915928.1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
LG1chromosomeLG1:2605008..2608007 -Vicia villosa cv. AU Merit genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
psvvaL003Pisum sativum Cameor genome v1aPisum sativum
avjvvaL110Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvvaL226Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
psvvaL323Pisum sativum Cameor genome v1aPisum sativum
psvvaL329Pisum sativum Cameor genome v1aPisum sativum
vfhvvaL001Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvvaL470Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vssvvaL035Vicia sativa cv. Studenica genome v1.0Vicia sativa
vvavvaR049Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vssvvaL299Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvvaL239Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvvaL515Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Va01G100050.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.1g445000.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
jg48499.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va09G054170.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.4g240480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
jg39182.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun03g439400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
XM_058870664.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LOC131645255drVicVill.AUMerit.1.0.gene-LOC131645255Vicia villosagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_058915928.1-4drVicVill.AUMerit.1.0.exon-XM_058915928.1-4Vicia villosaexon
exon-XM_058915928.1-3drVicVill.AUMerit.1.0.exon-XM_058915928.1-3Vicia villosaexon
exon-XM_058915928.1-2drVicVill.AUMerit.1.0.exon-XM_058915928.1-2Vicia villosaexon
exon-XM_058915928.1-1drVicVill.AUMerit.1.0.exon-XM_058915928.1-1Vicia villosaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
XP_058771911.1drVicVill.AUMerit.1.0.cds-XP_058771911.1_4Vicia villosaCDS
XP_058771911.1drVicVill.AUMerit.1.0.cds-XP_058771911.1_3Vicia villosaCDS
XP_058771911.1drVicVill.AUMerit.1.0.cds-XP_058771911.1_2Vicia villosaCDS
XP_058771911.1drVicVill.AUMerit.1.0.cds-XP_058771911.1Vicia villosaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVicVill.AUMerit.1.0.rna-XM_058915928.1drVicVill.AUMerit.1.0.rna-XM_058915928.1Vicia villosapolypeptide
drVicVill.AUMerit.1.0.rna-XM_058915928.1drVicVill.AUMerit.1.0.rna-XM_058915928.1-proteinVicia villosapolypeptide


Homology
[Close]
BLAST of XM_058915928.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6M3R7|A0A2Z6M3R7_TRISU (DUF4408 domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_203640 PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.479e-26
Identity = 66/128 (51.56%), Postives = 86/128 (67.19%), Query Frame = 0 
Query:    1 MLAHILERKYMFLICNLILAFLANTTSSSSDHFEYFQSQFSNDFVVDIEDEHE---VQAMKKEEVFYEQLVSSEEEGSSEDEAAIQ---EEEEELGDINRDELNRRFEEFIRKMKEEIMIEPKT-HPI 121
            MLA  LERKYMFLICN+++AFLA T+S+SS   EY  SQ+S   + + E+  E   VQ MKK +   +     EE+   ++        +EEEELGDIN +ELNR+F+EFIRKMKEEI I+P+T HPI
Sbjct:   43 MLALTLERKYMFLICNILIAFLAKTSSTSSHGLEY--SQYSQPSIFNKEEHDEEVAVQVMKKNDDNDDDDEEEEEDDDIDELVTTMVSAKEEEELGDINTEELNRKFDEFIRKMKEEIRIQPQTLHPI 168
[Close]
BLAST of XM_058915928.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9TT79|A0A0L9TT79_PHAAN (DUF4408 domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g326200 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.036e-14
Identity = 58/137 (42.34%), Postives = 74/137 (54.01%), Query Frame = 0 
Query:    1 MLAHILERKYMFLICNLILAFLANTTSSSSDHFEYFQSQFSNDFVVDIEDEHEVQAMKKEEVFYEQ----------LVSSEEEG----SSEDEAAIQEEEEELGDINRDELNRRFEEFIRKMKEEIMIEPKTHPIAI 123
            ML+  L+RKYMF+ICN ILA LA    S   H +  Q+Q S +    + D   ++  K +E + EQ          L+  EEEG    SSED+ A           N DELNR+FEEFIRKMKEEI IE +  PI +
Sbjct:   48 MLSPTLQRKYMFIICNAILALLA---ISPPFHVQ-LQAQVSEE---ALGDFLTIEEAKTQEDYSEQVSAAEHDTEVLIIGEEEGETGYSSEDQLA-----------NTDELNRKFEEFIRKMKEEIRIEAQRQPIEV 166
[Close]
BLAST of XM_058915928.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6A1WBJ1|A0A6A1WBJ1_9ROSI (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G006263 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.892e-14
Identity = 55/140 (39.29%), Postives = 72/140 (51.43%), Query Frame = 0 
Query:    1 MLAHILERKYMFLICNLILAFLANTTSSSSD------HFEYFQSQFSNDFVVDIEDEHEVQAMKKEEVFYEQLVSSEEEGSSEDEAAIQEEEEELGDIN-----------RDELNRRFEEFIRKMKEEIMIEPKTHPIAI 123
            +    LERKY+FLICN +L  LA +++S S         E   S  S      +EDE  V ++  +E      V+ E +   E EA + E+EEE G +             DELNRRFEEFIRKMKEEI IE +   IA+
Sbjct:   62 LFTRTLERKYVFLICNWLLVILAKSSASRSATSDAELGGEVSASDESAAETSSVEDEEHVGSIGSQE----NTVALEGKEKGESEAFVAEDEEESGVVRPDEEEEVAPAENDELNRRFEEFIRKMKEEIRIEAQQSLIAV 197
[Close]
BLAST of XM_058915928.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6A4P7M0|A0A6A4P7M0_LUPAL (DUF4408 domain-containing protein OS=Lupinus albus OX=3870 GN=Lalb_Chr18g0057151 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.149e-14
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = 0 
Query:    1 MLAHILERKYMFLICNLILAFLANTT----SSSSDHFE--------------------YFQSQFSNDFVVDIEDEHEVQAMKKEEVFYEQLVSSEEEGS---------SEDEAAIQEEEEELGD--------------INRDELNRRFEEFIRKMKEEIMIEPKTHPIAI 123
            M  H LERKYMFLICN ILAF+A T+    SS +  F+                    +  S+F  +  + +E++   QA   EEV    L +SEE+ +          ++E+ I+E E E+ D              IN DELNR+FEEFIRKMKEEI IE +   IA+
Sbjct:   59 MFTHTLERKYMFLICNAILAFIAKTSLKNPSSPTSVFDLEFNQESLNLSEINAPVSVPFRSSEFQENAPLMVEEQVLEQAKCNEEV----LEASEEQENETLYALTEGKDNESYIEETESEVEDDEVADTTMTINEQLINTDELNRKFEEFIRKMKEEIRIEAQRQLIAV 224
[Close]
BLAST of XM_058915928.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6KQH0|A0A4D6KQH0_VIGUN (DUF4408 domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g130 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.120e-13
Identity = 53/141 (37.59%), Postives = 75/141 (53.19%), Query Frame = 0 
Query:    1 MLAHILERKYMFLICNLILAFLANTTSSSSDHFEYFQSQFSNDFVVD---IEDEHEVQAMKKEEVFYEQLVSSEEEG-----SSEDEAAIQEEEEELGDI----------NRDELNRRFEEFIRKMKEEIMIEPKTHPIAI 123
            ML   L+RKYMF+ICN ILA LA     S  H E   S  +    V    +ED   ++  K +E + EQ+ ++E E      + E+   + +++E + D           N DELNR+FEEFIRKMKEE+ IE +  PI +
Sbjct:   59 MLTRTLQRKYMFIICNAILALLA----ISPFHEELQASATATKTQVSAEAVEDFPTIEEAKTQEDYSEQVSAAEHETEMVPIAEEEGGTVAKDDELVADTRMETTEDQVANTDELNRKFEEFIRKMKEEMRIEAQRQPIEV 195
[Close]
BLAST of XM_058915928.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9Q1APS3|A0A9Q1APS3_9ROSI (TRANSMEMBRANE PROTEIN OS=Salix koriyanagi OX=2511006 GN=OIU74_002832 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.741e-13
Identity = 59/149 (39.60%), Postives = 81/149 (54.36%), Query Frame = 0 
Query:    2 LAHILERKYMFLICNLILAFLANTTSSSSDHFEYFQSQFSNDFVVD------IEDEHEVQAMKKEEV------------------FYEQLVSSEEEGSSEDEAAIQEEEEELGD---INRDELNRRFEEFIRKMKEEIMIEPKTHPIAI 123
            L+H LERKYMFLICN ILA LA ++ SSS    +++ + S++  +         D+ EV A   E +                    E LVS EE+   E+   + ++EE+ GD    + +ELNRRFEEFIRKMKEEI IE +   IA+
Sbjct:   52 LSHYLERKYMFLICNGILAILAKSSVSSSKTSAFYERELSSEPTLSSAIAEATVDDQEVHAASVEPLEDIVLATEEEEEEEEETASSEALVSEEEDFMEENTECMVKQEEDEGDEELTSTEELNRRFEEFIRKMKEEIRIEAQQQVIAV 200
[Close]
BLAST of XM_058915928.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A072VFN6|A0A072VFN6_MEDTR (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=25486247 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.194e-13
Identity = 66/167 (39.52%), Postives = 77/167 (46.11%), Query Frame = 0 
Query:    1 MLAHILERKYMFLICNLILAFLAN-----TTSSSSDHFEYFQSQFSNDFVV----DIEDEHEVQAMKKEEVFYEQLVS-SEEEGSSEDEAAIQEE----------------------------------EEELGDINRDELNRRFEEFIRKMKEEIMIEPKTHPIAI 123
            +  H LERKYMFLICN ILAFLA      TT+SS   F+ F +  S+D VV      E   EV  M +E          SE E   ED   IQ E                                   EEL   N +ELNR+FEEFIRKMKEE+ IE +TH IA+
Sbjct:   57 IFTHTLERKYMFLICNGILAFLAKNLFIITTTSSDYDFDQFHA--SDDMVVAPLASFESLEEVSLMAEELEEEYYEKQVSEAEEHKEDTLNIQNEGIDEEEVTETEVDANVLAQDYADDDEVDETTLTTNEELA--NTEELNRKFEEFIRKMKEEMRIEAQTHLIAV 219
[Close]
BLAST of XM_058915928.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5E4FTA8|A0A5E4FTA8_PRUDU (PREDICTED: glutamic acid-rich OS=Prunus dulcis OX=3755 GN=ALMOND_2B026196 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.278e-13
Identity = 63/176 (35.80%), Postives = 83/176 (47.16%), Query Frame = 0 
Query:    1 MLAHILERKYMFLICNLILAFLANTTSSSSD------HFEYFQSQFSN----DFVVD--------IEDEHEVQAMKK---------------------EEVFYEQLVSSEEEGSSEDEAAIQEEEEE--------------LGDINRDELNRRFEEFIRKMKEEIMIEPKTHPIAI 123
            +    LERKYMFL+CN ILAFLA TT+S S+       F    +  +N    D  +D         EDE E   ++K                     EE+   Q  S+EE+G    E+ I++ EEE              L   + DELN++FEEFIRKMKEEI IE +  PIA+
Sbjct:   80 IFTRALERKYMFLVCNGILAFLAKTTTSKSNDNSCTCSFSCSTTSINNHKSHDESLDQDAIAYAAGEDEGESPTIQKEDDDDGDGQQEELKNGTLLQAEEI--PQAFSAEEKGEG-SESLIKQREEEMDTPELETNHVNDYLATTSTDELNKKFEEFIRKMKEEIRIEAQQQPIAV 252
[Close]
BLAST of XM_058915928.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P4BKQ3|A0A6P4BKQ3_ARADU (Uncharacterized protein LOC107467093 OS=Arachis duranensis OX=130453 GN=LOC107467093 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.592e-13
Identity = 52/129 (40.31%), Postives = 79/129 (61.24%), Query Frame = 0 
Query:    2 LAHILERKYMFLICNLILAFLANTTSSSSDHFE---YFQSQFSNDFVVDIEDEHEVQAMKKEEVFYEQLVSSEEEGSSEDEAAIQ----EEEEELGDINRDELNRRFEEFIRKMKEEIMIEPKTHPIAI 123
            L   L+RKYMFL+CN+ILAFLA+ +   +   +   Y++   S++ ++  +D   + A  +E   +E+     +  +SE+   ++     +EEEL   N DELNR+FEEFIRKMKEEI IE +T PIA+
Sbjct:   61 LTRTLQRKYMFLLCNVILAFLASNSLYDAPLVKGECYYEQVSSSELLLANQDYEPLLAETEEGKEHEEEGGGGKGINSEEVVEVELEDARKEEELA--NADELNRKFEEFIRKMKEEIRIEAQTPPIAV 187
[Close]
BLAST of XM_058915928.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445EL86|A0A445EL86_ARAHY (DUF4408 domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A01g000689 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.592e-13
Identity = 52/129 (40.31%), Postives = 79/129 (61.24%), Query Frame = 0 
Query:    2 LAHILERKYMFLICNLILAFLANTTSSSSDHFE---YFQSQFSNDFVVDIEDEHEVQAMKKEEVFYEQLVSSEEEGSSEDEAAIQ----EEEEELGDINRDELNRRFEEFIRKMKEEIMIEPKTHPIAI 123
            L   L+RKYMFL+CN+ILAFLA+ +   +   +   Y++   S++ ++  +D   + A  +E   +E+     +  +SE+   ++     +EEEL   N DELNR+FEEFIRKMKEEI IE +T PIA+
Sbjct:   61 LTRTLQRKYMFLLCNVILAFLASNSLYDAPLVKGECYYEQVSSSELLLANQDYEPLLAETEEGKEHEEEGGGGKGINSEEVVEVELEDARKEEELA--NADELNRKFEEFIRKMKEEIRIEAQTPPIAV 187
[Close]
BLAST of XM_058915928.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:4223008-4223613 FORWARD LENGTH=201)

HSP 1 Score: 48.9062 bits (115), Expect = 9.928e-8
Identity = 43/162 (26.54%), Postives = 72/162 (44.44%), Query Frame = 0 
Query:    1 MLAHILERKYMFLICNLILAFLANTTS--SSSDHFEYFQSQFSNDF--------VVDIEDEHEVQAMKKEEVFYEQLVSSEEE---------------------GSSEDEAAIQE---EEEELGDIN-----RDELNRRFEEFIRKMKEEIMIEPKTHPIAI 123
            ++ H +++ YMFL+CN ++  +A  +   +SS   E   S     F           +E E++       E F  + V+ EE+                        E+E  ++     EEE G++       +E+N++F+EFIRKMKEE+ IE K H I +
Sbjct:   40 LVTHAVDKNYMFLLCNGLVVVVAKCSGLVASSKPIEKIWSNTDKTFDYGDFESYTTILELEYKSDHGIGTESFLAEEVTVEEDTKHQETEDNEEEDDDDNTLADNDGEEECGLRGGSINEEEEGNVGVMTSTEEEMNKKFDEFIRKMKEELRIEAKRHLILV 201
[Close]
BLAST of XM_058915928.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:1573721-1574311 FORWARD LENGTH=196)

HSP 1 Score: 47.7506 bits (112), Expect = 2.591e-7
Identity = 40/145 (27.59%), Postives = 71/145 (48.97%), Query Frame = 0 
Query:    1 MLAHILERKYMFLICNLILAFLANTTSSSSDHFEYFQSQFSNDFV-----VDIEDEHEVQAMKKEEVFYEQLVSSEEEGS---------------SEDEAAIQEE-----------EEELGD--INRDELNRRFEEFIRKMKEEI 112
            M ++++++KYMFL+CN I+ F+  +   +SD   + ++    + V     V I+D  E +  K   +  E  VS EEEG                 EDE  + ++           ++ + D  ++ ++LN++ E+FIRKMK EI
Sbjct:   48 MYSNLVDKKYMFLLCNGIVGFILGSFHGNSDSLSHGKAI---NIVEQTKEVGIKDLKETKVNKVVALLEESNVSKEEEGRVVLSREEEEEVALVVKEDEGILVQDLSITRLDDHDDDDAINDSLLSSEDLNKKCEDFIRKMKAEI 189
The following BLAST results are available for this feature:
BLAST of XM_058915928.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A2Z6M3R7|A0A2Z6M3R7_TRISU3.479e-2651.56DUF4408 domain-containing protein OS=Trifolium sub... [more]
tr|A0A0L9TT79|A0A0L9TT79_PHAAN1.036e-1442.34DUF4408 domain-containing protein OS=Phaseolus ang... [more]
tr|A0A6A1WBJ1|A0A6A1WBJ1_9ROSI1.892e-1439.29Uncharacterized protein OS=Morella rubra OX=262757... [more]
tr|A0A6A4P7M0|A0A6A4P7M0_LUPAL4.149e-1437.06DUF4408 domain-containing protein OS=Lupinus albus... [more]
tr|A0A4D6KQH0|A0A4D6KQH0_VIGUN1.120e-1337.59DUF4408 domain-containing protein OS=Vigna unguicu... [more]
tr|A0A9Q1APS3|A0A9Q1APS3_9ROSI1.741e-1339.60TRANSMEMBRANE PROTEIN OS=Salix koriyanagi OX=25110... [more]
tr|A0A072VFN6|A0A072VFN6_MEDTR2.194e-1339.52Transmembrane protein, putative OS=Medicago trunca... [more]
tr|A0A5E4FTA8|A0A5E4FTA8_PRUDU2.278e-1335.80PREDICTED: glutamic acid-rich OS=Prunus dulcis OX=... [more]
tr|A0A6P4BKQ3|A0A6P4BKQ3_ARADU3.592e-1340.31Uncharacterized protein LOC107467093 OS=Arachis du... [more]
tr|A0A445EL86|A0A445EL86_ARAHY3.592e-1340.31DUF4408 domain-containing protein OS=Arachis hypog... [more]
back to top
BLAST of XM_058915928.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of XM_058915928.1 vs. Araport11
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
|9.928e-826.54Symbols: no symbol available | no full name availa... [more]
|2.591e-727.59Symbols: no symbol available | no full name availa... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vicia villosa cv. AU Merit genome v1.0
Date Performed: 2024-08-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34947TRANSMEMBRANE PROTEINcoord: 48..121

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVicVill.AUMerit.1.0.rna-XM_058915928.1 ID=drVicVill.AUMerit.1.0.rna-XM_058915928.1; Name=XM_058915928.1; organism=Vicia villosa; type=mRNA; length=372bp
ATGCTTGCTCACATTCTTGAAAGAAAATACATGTTCCTCATATGTAATCT
CATCCTTGCATTTCTAGCAAACACCACTTCCTCTTCTTCTGATCACTTTG
AGTATTTTCAATCTCAATTTTCCAATGATTTTGTGGTTGATATTGAAGAT
GAACATGAAGTGCAAGCAATGAAAAAGGAAGAAGTATTTTATGAGCAATT
AGTGTCATCAGAAGAAGAAGGAAGTTCAGAGGATGAAGCTGCAATTCAAG
AAGAAGAAGAAGAATTAGGAGATATTAATAGAGATGAACTCAACCGAAGG
TTTGAAGAGTTTATAAGGAAAATGAAAGAGGAGATTATGATTGAACCCAA
AACACACCCAATTGCAATCTAG
back to top

protein sequence of drVicVill.AUMerit.1.0.rna-XM_058915928.1

>drVicVill.AUMerit.1.0.rna-XM_058915928.1 ID=drVicVill.AUMerit.1.0.rna-XM_058915928.1; Name=drVicVill.AUMerit.1.0.rna-XM_058915928.1; organism=Vicia villosa; type=polypeptide; length=123bp
MLAHILERKYMFLICNLILAFLANTTSSSSDHFEYFQSQFSNDFVVDIED
EHEVQAMKKEEVFYEQLVSSEEEGSSEDEAAIQEEEEELGDINRDELNRR
FEEFIRKMKEEIMIEPKTHPIAI
back to top

mRNA from alignment at LG1:2605008..2608007-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVicVill.AUMerit.1.0.rna-XM_058915928.1 ID=drVicVill.AUMerit.1.0.rna-XM_058915928.1; Name=XM_058915928.1; organism=Vicia villosa; type=mRNA; length=3000bp; location=Sequence derived from: LG1:2605008..2608007- (Vicia villosa
ATGAGCATTCCGCCATCATCATCAAAGACGACGCGCAACATTCCACCACC
ATCATCAAAGACGACGCACAACATTCCACCATCATCAACTTGCAAAGAGG
ATGTTCGATTCTGTATGAGGTTTGTTTTCTTAAATCGTTAGGCTTAAATA
ACATTGTTTACTTTGGTTAAGTATTCTGAATGTTCATCCTTTGTTATTTG
TTCAGACCATCTAAAAGCAACTACGTTAAAATAAGGCTTCATCATAGGGG
ACAGTTAGTAGAGAGTCCATGTAAATGGTATGTTAATGGTTTGGTGTCTG
AACTGGATTGGGAATGGGATACGGACTACATGTCGTACATGGATTTAGAA
GCTTTGATTAAGGATGAGGGATATATAAATATCAAATGTATGTGGTACTG
GAACCCTAGGTTTTCCTTTGGTCGTGGCCTTAGACCCTTAAACTGTGATA
ACGATGTTCTTAAGTTTGTTGAGGATATTAAGGGCTTTGAATTGGTGGAT
GTGTATGTTGAGCACACAATAGAAGAGACTCCTGTTGTTGAGGATGATGT
TGATGGCTGTCCAAACTATGCTGATGATGAAGCTGAATCAGATGTTGAAA
TTTTAGGTAATCCTGTTGAAGTTGAAAAGGAACATGTTGAGGCTGAAGTT
GAAGGTGGGGGTGAACATGTTGATACTCAAGAGGATGTTGGAAGTGAACA
TGTTCAGACTCAAGAGGATGATGATGATAGAGACTATGTTGCAAGTGAGG
GTGAGGTAAGTAGTTCTAGTAATGAGGTGAATGTTGAACAGCCTGTGGAT
TTGGATTGGGCCACTATAATTCAATGTGATGAGGGTGGTGATAAGGATAG
AAATTCTGATGAGGATGATGACTCTGATGTGTTACAAACACCTAATGGAA
GTGGTAGTGATGAGGAACAAGAAAAATTTCCCTCTTTTAAAAGTGAGACC
TCAAAGTTTGAACTAGGAATGGTATTTAGTAACAAAGAAAAGATACACCA
GGCTGTGGCAGATTATGGCTTGAAGATGAACAAAAATATCCATGTTAAGA
AAAATGATGCAAAGAAGATGGTGATGAAGTGTATGGAAGGCTGCAATTTT
CACATGAGGATTAGCAAAAGGGTTGGGAATCAATTTTGGCAAGTAGTCAG
TTTAAATGATGAACACAATTGTTCCAGAACTCCAGGTAACAGACAAGCAA
AGACTACTTATTTGGCTAAGCAGTTTGGTCACATAATTAGGCACAACCCT
GATATGAAGCCAGCAGGTTTGATTGCTCAAGCCATTGAAAAATGGGGAGT
TAAGATATCTCGTGATCAGGCATATAGAGCTAAAAGAAAGGCTATGGATT
TGTTACAAGGTGCTGCTATGGACCAATTCAACCATCTGAGAAGCTATGCC
CAAGAGTTACTAAAATCTAACCCTAATAGCAGTGTTGTCATCAGATGTTC
TCCTTCAAATGAAGGCCCTGTCTTTGAAAGGATTTATGTCTGTCTAGAGG
CTTGCAAATATGGGTTTGCAAATTATTGTAGACCATTGATTGGATTGGAT
GCCTGTTTCTTGAAAGGTGACTTTGGAGGACAACTTATGGCTGCTGTTGG
GAGAGATGGAAACAATAAAATTTTTCCTATTGCTTATGCTGTTGTGGAAG
CTGAGACAAAAGATTCATGGGATTGGTTTATCAAACTTTTATTGGAAGAC
CTAGAAGCTATAAACAAAAGAGCTTATGTTTTCATTTCTGACCAACAAAA
GGTAAAACTCTAACTGACTTTTTATTGTCTTCCATTTCTGACCATTTAGT
TACTGTAATTGACCTATTATTTTGTTAGGGATTGGTACCTGCTATTCAAA
GTGTGAGTGAACATGTTGAGCAACGCCTTTGTGCAAAACACCTATATGGG
AATTGGAAGAAGAAAAATCCTGGGCTTGAATTCAAAGAGGTAATGTGGAG
TGCGGCTAGAGCTACAACTGTACCAGCATGGGAAAGGGCAATGGCAAAGA
TGAAGAGCATGAAGCAATCTGCATGGAAGGATATGATGGATATCCCTGCC
CATTATTGGAGTAGATCTCACTTCAAAACATATTCTAAATGTGATCTTCA
AGTAAACAACATGTGCGAGGCTTTTAATAGGGCAGTTCTAGAATATAGGG
ATAAACCAATCATCACATTGTTAGAAGGGATTAAGCACTACCTTACCAAA
AGGATAACTAAGCAAAAGGAAGTCATGACTAACTACAGTGGTGACATATG
CCCCAGAATACAACTTGTGCTTGAAACCAACAAGAAGGATGCACAACATT
GGACTCCAACATGGCATGGTGATGATGACATGGCAATATATGGTGTGACT
AATGGAAGGGACACTTATGTGGTTAATTTGAAGAATGAGACTTGTGCATG
TAGGAAATGGGATTTAACTGGAATCCCTTGCAGTCATTCCATTACATGTA
TGTGGCAACACAAGAATAAACCAGAAGATTATGTTTCTCAATATTACAGG
TATGTGACTGTCTTATAATGTAATTGCCTTCTTTGTATGTGTTACTGTTT
TCTAACTGTATGACTGGTTTCTTTGTATGTGATACTGTTTTCTTGTAGGA
AGAGTAATTACAAGAACACTTACTCCCATATTATATACCCTACTAATGGT
CCACAGCTTTGGCCTTTGGATGAGCAATCTAAAATGAATCCACCAATTAT
GAGAAGGGCCATAGGTCGTCCTAAGAAAATGAGGAACAAGGCTAATGATG
AACCAAAGAATCCGCATGTCCTTCCTAGAAGATTTGCAACAGTCACATGT
ACTAAGTGTGGAGCAATGGGACACAACAAGAGGAGTTGCAAGGGAAAGAG
GGCAGCTGACAGAGCCATCCCAAAAGGTGGAAATACCAAGACTAAAAAGG
GTGGTCAACAGAAGAAAACCAACACAAGTCAAGTTGAGATTGGATCCTCA
TCACAGGAACCCCAACCAACTCAACAATCTCAGCATGAACAGCTATAGTC
back to top

Coding sequence (CDS) from alignment at LG1:2605008..2608007-

>drVicVill.AUMerit.1.0.rna-XM_058915928.1 ID=drVicVill.AUMerit.1.0.rna-XM_058915928.1; Name=XM_058915928.1; organism=Vicia villosa; type=CDS; length=2736bp; location=Sequence derived from: LG1:2605008..2608007- (Vicia villosa
ATGAGCATTCCGCCATCATCATCAAAGACGACGCGCAACATTCCACCACC
ATCATCAAAGACGACGCACAACATTCCACCATCATCAACTTGCAAAGAGG
ATGTTCGATTCTGTATGAGACCATCTAAAAGCAACTACGTTAAAATAAGG
CTTCATCATAGGGGACAGTTAGTAGAGAGTCCATGTAAATGGTATGTTAA
TGGTTTGGTGTCTGAACTGGATTGGGAATGGGATACGGACTACATGTCGT
ACATGGATTTAGAAGCTTTGATTAAGGATGAGGGATATATAAATATCAAA
TGTATGTGGTACTGGAACCCTAGGTTTTCCTTTGGTCGTGGCCTTAGACC
CTTAAACTGTGATAACGATGTTCTTAAGTTTGTTGAGGATATTAAGGGCT
TTGAATTGGTGGATGTGTATGTTGAGCACACAATAGAAGAGACTCCTGTT
GTTGAGGATGATGTTGATGGCTGTCCAAACTATGCTGATGATGAAGCTGA
ATCAGATGTTGAAATTTTAGGTAATCCTGTTGAAGTTGAAAAGGAACATG
TTGAGGCTGAAGTTGAAGGTGGGGGTGAACATGTTGATACTCAAGAGGAT
GTTGGAAGTGAACATGTTCAGACTCAAGAGGATGATGATGATAGAGACTA
TGTTGCAAGTGAGGGTGAGGTAAGTAGTTCTAGTAATGAGGTGAATGTTG
AACAGCCTGTGGATTTGGATTGGGCCACTATAATTCAATGTGATGAGGGT
GGTGATAAGGATAGAAATTCTGATGAGGATGATGACTCTGATGTGTTACA
AACACCTAATGGAAGTGGTAGTGATGAGGAACAAGAAAAATTTCCCTCTT
TTAAAAGTGAGACCTCAAAGTTTGAACTAGGAATGGTATTTAGTAACAAA
GAAAAGATACACCAGGCTGTGGCAGATTATGGCTTGAAGATGAACAAAAA
TATCCATGTTAAGAAAAATGATGCAAAGAAGATGGTGATGAAGTGTATGG
AAGGCTGCAATTTTCACATGAGGATTAGCAAAAGGGTTGGGAATCAATTT
TGGCAAGTAGTCAGTTTAAATGATGAACACAATTGTTCCAGAACTCCAGG
TAACAGACAAGCAAAGACTACTTATTTGGCTAAGCAGTTTGGTCACATAA
TTAGGCACAACCCTGATATGAAGCCAGCAGGTTTGATTGCTCAAGCCATT
GAAAAATGGGGAGTTAAGATATCTCGTGATCAGGCATATAGAGCTAAAAG
AAAGGCTATGGATTTGTTACAAGGTGCTGCTATGGACCAATTCAACCATC
TGAGAAGCTATGCCCAAGAGTTACTAAAATCTAACCCTAATAGCAGTGTT
GTCATCAGATGTTCTCCTTCAAATGAAGGCCCTGTCTTTGAAAGGATTTA
TGTCTGTCTAGAGGCTTGCAAATATGGGTTTGCAAATTATTGTAGACCAT
TGATTGGATTGGATGCCTGTTTCTTGAAAGGTGACTTTGGAGGACAACTT
ATGGCTGCTGTTGGGAGAGATGGAAACAATAAAATTTTTCCTATTGCTTA
TGCTGTTGTGGAAGCTGAGACAAAAGATTCATGGGATTGGTTTATCAAAC
TTTTATTGGAAGACCTAGAAGCTATAAACAAAAGAGCTTATGTTTTCATT
TCTGACCAACAAAAGGGATTGGTACCTGCTATTCAAAGTGTGAGTGAACA
TGTTGAGCAACGCCTTTGTGCAAAACACCTATATGGGAATTGGAAGAAGA
AAAATCCTGGGCTTGAATTCAAAGAGGTAATGTGGAGTGCGGCTAGAGCT
ACAACTGTACCAGCATGGGAAAGGGCAATGGCAAAGATGAAGAGCATGAA
GCAATCTGCATGGAAGGATATGATGGATATCCCTGCCCATTATTGGAGTA
GATCTCACTTCAAAACATATTCTAAATGTGATCTTCAAGTAAACAACATG
TGCGAGGCTTTTAATAGGGCAGTTCTAGAATATAGGGATAAACCAATCAT
CACATTGTTAGAAGGGATTAAGCACTACCTTACCAAAAGGATAACTAAGC
AAAAGGAAGTCATGACTAACTACAGTGGTGACATATGCCCCAGAATACAA
CTTGTGCTTGAAACCAACAAGAAGGATGCACAACATTGGACTCCAACATG
GCATGGTGATGATGACATGGCAATATATGGTGTGACTAATGGAAGGGACA
CTTATGTGGTTAATTTGAAGAATGAGACTTGTGCATGTAGGAAATGGGAT
TTAACTGGAATCCCTTGCAGTCATTCCATTACATGTATGTGGCAACACAA
GAATAAACCAGAAGATTATGTTTCTCAATATTACAGGAAGAGTAATTACA
AGAACACTTACTCCCATATTATATACCCTACTAATGGTCCACAGCTTTGG
CCTTTGGATGAGCAATCTAAAATGAATCCACCAATTATGAGAAGGGCCAT
AGGTCGTCCTAAGAAAATGAGGAACAAGGCTAATGATGAACCAAAGAATC
CGCATGTCCTTCCTAGAAGATTTGCAACAGTCACATGTACTAAGTGTGGA
GCAATGGGACACAACAAGAGGAGTTGCAAGGGAAAGAGGGCAGCTGACAG
AGCCATCCCAAAAGGTGGAAATACCAAGACTAAAAAGGGTGGTCAACAGA
AGAAAACCAACACAAGTCAAGTTGAGATTGGATCCTCATCACAGGAACCC
CAACCAACTCAACAATCTCAGCATGAACAGCTATAG
back to top