evm.model.Chr01.10
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of evm.model.Chr01.10 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6LLX2|A0A4D6LLX2_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG4g259 PE=4 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.630e-33 Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = 0 Query: 9 MFKIGFSKEAPKGERRLEVGEWFLPIGLLSALNDYGANPGGNEESGNALLKEMEDAFGFAEGL 71
MFKIGFSKEAPKGERRLEVGEWFLPIG+L ALNDYGANPGGNEESG+ALLK MEDAFGFAEGL
Sbjct: 1 MFKIGFSKEAPKGERRLEVGEWFLPIGVLFALNDYGANPGGNEESGDALLKAMEDAFGFAEGL 63
BLAST of evm.model.Chr01.10 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6NI38|A0A4D6NI38_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG10g3556 PE=4 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.382e-26 Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 0 Query: 22 ERRLEVGEWFLPIGLLSALNDYGANPGGNEESGNALLKEMEDAFGFAEGL 71
ERRLEVGEWF+PIGLLSALNDYGANPGGNEESGNALLKEMEDAFGFAEGL
Sbjct: 43 ERRLEVGEWFMPIGLLSALNDYGANPGGNEESGNALLKEMEDAFGFAEGL 92
BLAST of evm.model.Chr01.10 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6LMQ5|A0A4D6LMQ5_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG4g258 PE=4 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.207e-25 Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 0 Query: 20 KGERRLEVGEWFLPIGLLSALNDYGANPGGNEESGNALLKEMEDAFGFAEGL 71
+GERRLEVGEWFLPIG+L ALNDYGANPGGNEESG+ALLK MEDAFGFAEGL
Sbjct: 7 RGERRLEVGEWFLPIGVLFALNDYGANPGGNEESGDALLKAMEDAFGFAEGL 58
BLAST of evm.model.Chr01.10 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6KPF3|A0A4D6KPF3_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g3200 PE=4 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.108e-24 Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 0 Query: 22 ERRLEVGEWFLPIGLLSALNDYGANPGGNEESGNALLKEMEDAFGFAEGL 71
ERRLEVGEWFLPIG+LSA NDYGANPGGNEESGNA LKEMEDAFGFAEGL
Sbjct: 33 ERRLEVGEWFLPIGVLSASNDYGANPGGNEESGNAFLKEMEDAFGFAEGL 82 The following BLAST results are available for this feature:
BLAST of evm.model.Chr01.10 vs.
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of evm.model.Chr01.10 vs.
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs arabidopsis Araport11) Total hits: 0 Position : 0 Zoom : x 1
BLAST of evm.model.Chr01.10 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt TrEMBL) Total hits: 4 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.Chr01.10_hau_v1 ID=evm.model.Chr01.10_hau_v1; Name=evm.model.Chr01.10; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=216bpback to top protein sequence of evm.model.Chr01.10_hau_v1 >evm.model.Chr01.10_hau_v1 ID=evm.model.Chr01.10_hau_v1; Name=evm.model.Chr01.10_hau_v1; organism=Vigna unguiculata subsp. sesquipedalis; type=polypeptide; length=71bpback to top mRNA from alignment at Chr01:532645..533159+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>evm.model.Chr01.10_hau_v1 ID=evm.model.Chr01.10_hau_v1; Name=evm.model.Chr01.10; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=515bp; location=Sequence derived from: Chr01:532645..533159+ (Vigna unguiculata subsp. sesquipedalisback to top Coding sequence (CDS) from alignment at Chr01:532645..533159+ >evm.model.Chr01.10_hau_v1 ID=evm.model.Chr01.10_hau_v1; Name=evm.model.Chr01.10; organism=Vigna unguiculata subsp. sesquipedalis; type=CDS; length=216bp; location=Sequence derived from: Chr01:532645..533159+ (Vigna unguiculata subsp. sesquipedalisback to top |