rna-XM_004496660.3

Transcript Overview


Name	rna-XM_004496660.3
Unique Name	rna-XM_004496660.3_CaCDCfrontier-NCBI_v1
Type	mRNA
Organism	Cicer arietinum (chickpea)
Sequence length	1434
Product	OBERON-like protein, transcript variant X2

References

External references for this mRNA


Database	Accession
GeneID	101515003
GenBank	XM_004496660.3

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr4	chromosome	chr4:13640499..13643587 -	Cicer arietinum CDC Frontier NCBI RefSeq v1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum CDC Frontier NCBI RefSeq v1	2024-01-04
Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11	2024-01-25
InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1	2024-01-25
Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot	2024-01-25
Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL	2024-01-25

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
cacanL131	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ancanL0426	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
cacanL333	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ancanL0881	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
caicanL0134	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caicanL0401	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caicanL0962	Cicer arietinum ICC 4958 genome v2	Cicer arietinum

Orthologs


Gene/Transcript	Assembly	Species
rna-TanjilR_22969	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-TanjilR_22192	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Ca_04582	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
Ca_11866	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
Ca_22211.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
Ca_29792.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
Ca_10461.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-LOC101515003	gene-LOC101515003_CaCDCfrontier-NCBI_v1	Cicer arietinum	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
exon-XM_004496660.3-4	exon-XM_004496660.3-4_CaCDCfrontier-NCBI_v1	Cicer arietinum	exon
exon-XM_004496660.3-3	exon-XM_004496660.3-3_CaCDCfrontier-NCBI_v1	Cicer arietinum	exon
exon-XM_004496660.3-2	exon-XM_004496660.3-2_CaCDCfrontier-NCBI_v1	Cicer arietinum	exon
exon-XM_004496660.3-1	exon-XM_004496660.3-1_CaCDCfrontier-NCBI_v1	Cicer arietinum	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds-XP_004496717.1	cds-XP_004496717.1_CaCDCfrontier-NCBI_v1_4	Cicer arietinum	CDS
cds-XP_004496717.1	cds-XP_004496717.1_CaCDCfrontier-NCBI_v1_3	Cicer arietinum	CDS
cds-XP_004496717.1	cds-XP_004496717.1_CaCDCfrontier-NCBI_v1_2	Cicer arietinum	CDS
cds-XP_004496717.1	cds-XP_004496717.1_CaCDCfrontier-NCBI_v1	Cicer arietinum	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-XM_004496660.3_CaCDCfrontier-NCBI_v1	rna-XM_004496660.3_CaCDCfrontier-NCBI_v1	Cicer arietinum	polypeptide
rna-XM_004496660.3_CaCDCfrontier-NCBI_v1	rna-XM_004496660.3_CaCDCfrontier-NCBI_v1-protein	Cicer arietinum	polypeptide

Homology

[Close]

BLAST of rna-XM_004496660.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:1585504-1587268 REVERSE LENGTH=471)

HSP 1 Score: 371.703 bits (953), Expect = 1.490e-124
Identity = 212/462 (45.89%), Postives = 294/462 (63.64%), Query Frame = 0

Query:   23 LNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGG--FASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIGDVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGD-NICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAIDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRGNNTEDILNVDDKLTAHSAGFSINGSA----AMDTTDDESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEESLNEHKKYLQNLYQQLDREKSELASQPNGSHSGVLFETVKERKEQLRRELMKFENMKRVANGFGSTSKDILEKYFGL 477
            L L PV+P +SG GLPYAPEN+PN GD W W+ G R++  G F DRYLY P  L        R    F S+LS++R+++  FP+ DV  FFA FSW+IP     G   P   V L  +  ++    D   D   CKAGN  C SL+ + E +  PAMPCDICC E  FC +CCCILCCK +   +GGYSYI C+  V + +ICGHVAHM CALRA++AGT+GG +GLD EYYCRRCD + +L  H NK L +C+ ++ +GD+ EK+LNLG+C+L G+Q+  AKEL++ I   + KLK G + ED+ N DD  T  S  +S +G A     + +  D +P       IG   F + +E  KLE E+ +VL ALRK+Q++EY +AE  L+  K+ L +LY+QL++EKSEL+ + +G+ +  L   V +R +Q+R+E+ K + M+ VA GFG T + +LE+YF L
Sbjct:   17 LLLRPVSPLESGEGLPYAPENWPNPGDTWHWKVGPRISGKGYFVDRYLYPPKYLPGLDTEILRKNKVFRSRLSLQRYIRVHFPEADVQKFFASFSWSIPCRDGQG-VLPQKQVQLPVYSSDEDPMRDDGSDTAVCKAGNEKCRSLMPQCEAETLPAMPCDICCGERKFCVDCCCILCCKLISLEHGGYSYIKCEAVVSEGHICGHVAHMNCALRAYLAGTIGGSMGLDTEYYCRRCDAKKDLFPHVNKFLEICQTVEYQGDV-EKILNLGICILRGAQRDNAKELLNCIESTVIKLKCGTSLEDLWN-DDTPTIWS-DYSDSGEARENDTLQSLQDVTP-------IGPIPFNHEAEMHKLEEEIGEVLRALRKAQEFEYQIAEGKLHAQKECLSDLYRQLEKEKSELSRRVSGTDANSLMTNVLKRLDQIRKEVTKLKEMEEVAKGFGRTPRGVLEEYFHL 467

[Close]

BLAST of rna-XM_004496660.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:1585504-1587268 REVERSE LENGTH=444)

HSP 1 Score: 320.087 bits (819), Expect = 9.254e-105
Identity = 191/430 (44.42%), Postives = 269/430 (62.56%), Query Frame = 0

Query:   55 TGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGG--FASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIGDVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGD-NICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAIDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRGNNTEDILNVDDKLTAHSAGFSINGSA----AMDTTDDESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEESLNEHKKYLQNLYQQLDREKSELASQPNGSHSGVLFETVKERKEQLRRELMKFENMKRVANGFGSTSKDILEKYFGL 477
             G R++  G F DRYLY P  L        R    F S+LS++R+++  FP+ DV  FFA FSW+IP     G   P   V L  +  ++    D   D   CKAGN  C SL+ + E +  PAMPCDICC E  FC +CCCILCCK +   +GGYSYI C+  V + +ICGHVAHM CALRA++AGT+GG +GLD EYYCRRCD + +L  H NK L +C+ ++ +GD+ EK+LNLG+C+L G+Q+  AKEL++ I   + KLK G + ED+ N DD  T  S  +S +G A     + +  D +P       IG   F + +E  KLE E+ +VL ALRK+Q++EY +AE  L+  K+ L +LY+QL++EKSEL+ + +G+ +  L   V +R +Q+R+E+ K + M+ VA GFG T + +LE+YF L
Sbjct:   22 VGPRISGKGYFVDRYLYPPKYLPGLDTEILRKNKVFRSRLSLQRYIRVHFPEADVQKFFASFSWSIPCRDGQG-VLPQKQVQLPVYSSDEDPMRDDGSDTAVCKAGNEKCRSLMPQCEAETLPAMPCDICCGERKFCVDCCCILCCKLISLEHGGYSYIKCEAVVSEGHICGHVAHMNCALRAYLAGTIGGSMGLDTEYYCRRCDAKKDLFPHVNKFLEICQTVEYQGDV-EKILNLGICILRGAQRDNAKELLNCIESTVIKLKCGTSLEDLWN-DDTPTIWS-DYSDSGEARENDTLQSLQDVTP-------IGPIPFNHEAEMHKLEEEIGEVLRALRKAQEFEYQIAEGKLHAQKECLSDLYRQLEKEKSELSRRVSGTDANSLMTNVLKRLDQIRKEVTKLKEMEEVAKGFGRTPRGVLEEYFHL 440

[Close]

BLAST of rna-XM_004496660.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:7974984-7977406 FORWARD LENGTH=600)

HSP 1 Score: 102.834 bits (255), Expect = 5.231e-23
Identity = 48/114 (42.11%), Postives = 65/114 (57.02%), Query Frame = 0

Query:   14 NALSHSNNSLNLTP-VAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGN 126
            +A +H    LN  P + P  +G GLPYAP ++P+ GD+W WR G+RV A G  +DR+L LP RL           FASK  + R+L+  FP +D   FFA FSW +P+     N
Sbjct:   90 SAFTHGETDLNQLPAIPPVSTGQGLPYAPVDWPSPGDVWTWRVGRRVTAMGYHQDRFLILPQRL---QQKHVPKSFASKPQLARYLESDFPGMDADAFFASFSWKVPALFQPAN 200

[Close]

BLAST of rna-XM_004496660.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:8511587-8513532 REVERSE LENGTH=555)

HSP 1 Score: 100.908 bits (250), Expect = 1.886e-22
Identity = 48/99 (48.48%), Postives = 64/99 (64.65%), Query Frame = 0

Query:   23 LNLTP-VAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPS 120
            LN  P + P  SG GLP+AP +FP+ GD+W WR G+RV   G  +DR L LP RL   G +  +  FASK ++ R+L+ SFPD+D   FFA F+W IP+
Sbjct:   65 LNQLPAIPPASSGQGLPFAPVDFPSPGDVWTWRVGRRVNNAGFHKDRLLILPERL--KGKNVPK-SFASKNTLSRYLETSFPDMDANAFFASFTWNIPA 160

[Close]

Query:   23 LNLTP-VAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPS 120
            LN  P + P  SG GLP+AP +FP+ GD+W WR G+RV   G  +DR L LP RL   G +  +  FASK ++ R+L+ SFPD+D   FFA F+W IP+
Sbjct:   65 LNQLPAIPPASSGQGLPFAPVDFPSPGDVWTWRVGRRVNNAGFHKDRLLILPERL--KGKNVPK-SFASKNTLSRYLETSFPDMDANAFFASFTWNIPA 160

[Close]

Query:   23 LNLTP-VAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPS 120
            LN  P + P  SG GLP+AP +FP+ GD+W WR G+RV   G  +DR L LP RL   G +  +  FASK ++ R+L+ SFPD+D   FFA F+W IP+
Sbjct:   65 LNQLPAIPPASSGQGLPFAPVDFPSPGDVWTWRVGRRVNNAGFHKDRLLILPERL--KGKNVPK-SFASKNTLSRYLETSFPDMDANAFFASFTWNIPA 160

[Close]

BLAST of rna-XM_004496660.3 vs. Araport11
Match: | (Symbols: OBE1 | OBERON1 | chr3:2484986-2486876 FORWARD LENGTH=577)

HSP 1 Score: 54.6842 bits (130), Expect = 1.067e-7
Identity = 40/146 (27.40%), Postives = 65/146 (44.52%), Query Frame = 0

Query:  178 PCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALR---AHMAGTVGGMIGL-DAEYYCRRCDGRTELISHANKILLVCEA-IDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRG 318
            PC+IC     FC  C C++C K  D A     +I C      ++C H  H +CA+R     M  +   + G+ +  + CR C+  +EL+     +   C    D E  +KE  L+    +  GS+    ++L  +    M K+K G
Sbjct:  223 PCEICANRKGFCNLCMCVICNK-FDFAVNTCRWIGC------DVCSHWTHTDCAIRDGEISMGVSPKSVSGMGEMLFKCRACNHTSELLGWVKDVFQHCAPNWDRESLMKE--LDFVSRIFRGSEDTRGRKLFWKCEELMEKIKGG 359

[Close]

BLAST of rna-XM_004496660.3 vs. Araport11
Match: | (Symbols: OBE1 | OBERON1 | chr3:2485104-2486876 FORWARD LENGTH=566)

HSP 1 Score: 54.299 bits (129), Expect = 1.444e-7
Identity = 40/146 (27.40%), Postives = 65/146 (44.52%), Query Frame = 0

Query:  178 PCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALR---AHMAGTVGGMIGL-DAEYYCRRCDGRTELISHANKILLVCEA-IDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRG 318
            PC+IC     FC  C C++C K  D A     +I C      ++C H  H +CA+R     M  +   + G+ +  + CR C+  +EL+     +   C    D E  +KE  L+    +  GS+    ++L  +    M K+K G
Sbjct:  212 PCEICANRKGFCNLCMCVICNK-FDFAVNTCRWIGC------DVCSHWTHTDCAIRDGEISMGVSPKSVSGMGEMLFKCRACNHTSELLGWVKDVFQHCAPNWDRESLMKE--LDFVSRIFRGSEDTRGRKLFWKCEELMEKIKGG 348

[Close]

Query:  178 PCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALR---AHMAGTVGGMIGL-DAEYYCRRCDGRTELISHANKILLVCEA-IDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRG 318
            PC+IC     FC  C C++C K  D A     +I C      ++C H  H +CA+R     M  +   + G+ +  + CR C+  +EL+     +   C    D E  +KE  L+    +  GS+    ++L  +    M K+K G
Sbjct:  212 PCEICANRKGFCNLCMCVICNK-FDFAVNTCRWIGC------DVCSHWTHTDCAIRDGEISMGVSPKSVSGMGEMLFKCRACNHTSELLGWVKDVFQHCAPNWDRESLMKE--LDFVSRIFRGSEDTRGRKLFWKCEELMEKIKGG 348

[Close]

BLAST of rna-XM_004496660.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q10PC5|TTA1_ORYSJ (Protein TITANIA OS=Oryza sativa subsp. japonica OX=39947 GN=TTA PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 2.942e-8
Identity = 72/314 (22.93%), Postives = 132/314 (42.04%), Query Frame = 0

Query:  179 CDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHM---AGTVGGMIG-LDAEYYCRRCDGRTELISHANKILLVC-EAIDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRG-----NNTEDILN-----VDDKLTAHSAGFSINGSAAMDTTDDESPLNHLDVRIGKKYFGYRSESLKLEA---------------------EVDQVLEALRKSQKYEYNLAEESLNEHKKYLQNLYQQLDREKSE-LASQPNGSHSGVLFETVKERKEQLRRELMKFEN 455
            C IC T+  FC  C C +C K  D A    +++ C      ++CGH  H+ CAL  ++     T+ G IG  + ++ C  C+  +E+     ++   C E  ++E  +KE  L+    +  G +    K L ++    +S L +      + T  IL      V D     S    I  + A  +TD  S L    +   K  F +++ +  L+                      E D  LE + K ++ E  L ++  ++ +K + + Y+Q+ R +++ L  +     + V F+  +E++ +   EL   EN
Sbjct:  394 CKICSTKKGFCSACTCSVCHK-FDCAANTCTWVGC------DVCGHWCHVACALERNLIRPGPTLKGPIGTTEMQFQCLACNHSSEMFGFVKEVFNCCAENWNAETLMKE--LDFVRKIFAGCEDFEGKGLHAKAEEVLSLLGKKIISPLDATNSILQFFKYGVTDYSVTGSTSKGILAAQASQSTDMRS-LQTPTITPPKSSFNFKTTTSILDTDALKPSPKPLSIEPHFSTASKEDDSSLETIVKCKEAEAKLFQKLADDARKEVDS-YRQIVRSRTQKLEEEYAAKLAKVCFQETEEKRRKKLEELKMLEN 696

[Close]

BLAST of rna-XM_004496660.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XZ28|A0A1S2XZ28_CICAR (OBERON-like protein isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101515003 PE=4 SV=1)

HSP 1 Score: 992.26 bits (2564), Expect = 0.000e+0
Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 0

Query:    1 MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIGDVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAIDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRGNNTEDILNVDDKLTAHSAGFSINGSAAMDTTDDESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEESLNEHKKYLQNLYQQLDREKSELASQPNGSHSGVLFETVKERKEQLRRELMKFENMKRVANGFGSTSKDILEKYFGL 477
            MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIGDVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAIDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRGNNTEDILNVDDKLTAHSAGFSINGSAAMDTTDDESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEESLNEHKKYLQNLYQQLDREKSELASQPNGSHSGVLFETVKERKEQLRRELMKFENMKRVANGFGSTSKDILEKYFGL
Sbjct:    1 MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIGDVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAIDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRGNNTEDILNVDDKLTAHSAGFSINGSAAMDTTDDESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEESLNEHKKYLQNLYQQLDREKSELASQPNGSHSGVLFETVKERKEQLRRELMKFENMKRVANGFGSTSKDILEKYFGL 477

[Close]

BLAST of rna-XM_004496660.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3E501|A0A1S3E501_CICAR (Uncharacterized protein LOC101515003 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101515003 PE=4 SV=1)

HSP 1 Score: 983.786 bits (2542), Expect = 0.000e+0
Identity = 477/487 (97.95%), Postives = 477/487 (97.95%), Query Frame = 0

Query:    1 MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIGDVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAIDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSK----------LKRGNNTEDILNVDDKLTAHSAGFSINGSAAMDTTDDESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEESLNEHKKYLQNLYQQLDREKSELASQPNGSHSGVLFETVKERKEQLRRELMKFENMKRVANGFGSTSKDILEKYFGL 477
            MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIGDVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAIDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSK          LKRGNNTEDILNVDDKLTAHSAGFSINGSAAMDTTDDESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEESLNEHKKYLQNLYQQLDREKSELASQPNGSHSGVLFETVKERKEQLRRELMKFENMKRVANGFGSTSKDILEKYFGL
Sbjct:    1 MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIGDVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAIDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLFDEFGSLLQLKRGNNTEDILNVDDKLTAHSAGFSINGSAAMDTTDDESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEESLNEHKKYLQNLYQQLDREKSELASQPNGSHSGVLFETVKERKEQLRRELMKFENMKRVANGFGSTSKDILEKYFGL 487

[Close]

BLAST of rna-XM_004496660.3 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q7Y9X8|A0A3Q7Y9X8_CICAR (Uncharacterized protein LOC101515003 isoform X3 OS=Cicer arietinum OX=3827 GN=LOC101515003 PE=4 SV=1)

HSP 1 Score: 700.664 bits (1807), Expect = 0.000e+0
Identity = 337/347 (97.12%), Postives = 337/347 (97.12%), Query Frame = 0

Query:    1 MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIGDVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAIDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSK----------LKRGNNTEDILNVDDKLTAHSAG 337
            MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIGDVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAIDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSK          LKRGNNTEDILNVDDKLTAHSAG
Sbjct:    1 MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIGDVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAIDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLFDEFGSLLQLKRGNNTEDILNVDDKLTAHSAG 347

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BLAST of rna-XM_004496660.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4WE12|A0A9D4WE12_PEA (Oberon-like PHD finger domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_065085 PE=4 SV=1)

HSP 1 Score: 651.358 bits (1679), Expect = 0.000e+0
Identity = 325/478 (67.99%), Postives = 386/478 (80.75%), Query Frame = 0

Query:    1 MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIGDVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAIDS-EGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRGNNTEDILNVDDKLTAHSAGFSINGSAAMDTTDDESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEESLNEHKKYLQNLYQQLDREKSELASQPNGSHSGVLFETVKERKEQLRRELMKFENMKRVANGFGSTSKDILEKYFGL 477
            ME E NS+N      ++  N S NL PVAP+QSG GLPYAPENFPN GDIWRW+ GKR+++NGN+RDR LYLP RL A+      GGFASKL+ ER++KESFP I+++DFFA FSWTIPS LP GN NP+ D  +++ EL +Q ES+   DI GCKAGN MCSSLILEEEK++SP +PCDICC E  FCRECCCILC KTVDSAYGGYSYIMCKVK+GD+ICGHV H+ECALR++ AGTVGG IGLDAEY+C RCDGRTELISHA+K+L  CEAID+ + DIKEK+L LG+CLL GS+K AAKEL+SRI  A+SKLK G N EDILNVDD LTA+S G S NG+AA DTTDDE PL HL+V+ G + F Y+SE LKL+AE D+ +E L KSQK+EY  AEESL+ HKKYL N+ QQLD+EKSELAS+ N S S VL +TV++R EQLR+EL KFE MK+VANGFGSTSK+ILEK+FGL
Sbjct:    1 MELEVNSDND-----VARINFS-NLEPVAPDQSGEGLPYAPENFPNPGDIWRWKAGKRISSNGNYRDRSLYLPRRLAASYRG---GGFASKLAAERYVKESFPHINIVDFFASFSWTIPSGLP-GNMNPVADGRIRELELREQPESEI--DIGGCKAGNKMCSSLILEEEKENSPVVPCDICCVEPKFCRECCCILCYKTVDSAYGGYSYIMCKVKLGDDICGHVCHLECALRSYSAGTVGGTIGLDAEYFCWRCDGRTELISHADKLLQTCEAIDTNDDDIKEKILKLGICLLRGSEKVAAKELLSRITSAVSKLKHGTNVEDILNVDDSLTANSLGSSGNGNAARDTTDDEGPLKHLNVQEGTESFRYQSELLKLDAEFDKAMEDLEKSQKFEYKRAEESLHTHKKYLLNISQQLDQEKSELASESNTSRSSVLLQTVEKRNEQLRQELKKFEEMKKVANGFGSTSKEILEKHFGL 466

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BLAST of rna-XM_004496660.3 vs. UniProtKB/TrEMBL
Match: tr|A0A072VQ13|A0A072VQ13_MEDTR (CDPK adapter protein, putative OS=Medicago truncatula OX=3880 GN=25485197 PE=4 SV=1)

HSP 1 Score: 619.387 bits (1596), Expect = 0.000e+0
Identity = 305/462 (66.02%), Postives = 366/462 (79.22%), Query Frame = 0

Query:   19 SNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPS-----GNTNPIGD-VLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAIDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRGNNTEDILNVDDKLTAHSAGFSINGSAAMDTTDDESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEESLNEHKKYLQNLYQQLDREKSELASQPNGSHSGVLFETVKERKEQLRRELMKFENMKRVANGFGSTSKDILEKY 474
            SN+S  + PVAPEQSG GLPYAPENFPN GDIWRW++GKR++ NGN+RDRYLY+P RL+A   S     F SKLSVER++KE FPD+++ +FF  F+W+IPS LP      GNTNP+GD  LL+QFELE+++ESD LCDIDGCKAGN  CSSLILE+E  HSP MPCD+CC   NFCRECCCILC KT+DSAYGGYSYI+CKV  G+ ICGH AH+ECA R++MAGTV   IGLDAEY CRRCDG TELISHAN++LL CEAIDS  D+KEK+L+LG+CLLC SQKA AKELMSR ALA+SKLK G NTEDIL     LTA  +  S NG+AAMDT+DDESPLN   V+ G K F Y SE LKL+AE DQ +EA +KSQKYE  +AEE+L E  K+L NL +QL++EKSELA+QPN SHS VLF+TVK+ +EQLR+E+MK E MK++A G G TS D+L+ +
Sbjct:   15 SNSSNLVAPVAPEQSGEGLPYAPENFPNPGDIWRWKSGKRISNNGNYRDRYLYVPHRLVANRSSII---FKSKLSVERYVKEKFPDVNITEFFDSFTWSIPSGLPGNMNPRGNTNPLGDDSLLRQFELEEEAESDLLCDIDGCKAGNSTCSSLILEKE--HSPIMPCDLCCAAPNFCRECCCILCYKTLDSAYGGYSYIICKVTQGNTICGHAAHLECARRSYMAGTVEEPIGLDAEYLCRRCDGITELISHANELLLTCEAIDSNNDVKEKILHLGLCLLCDSQKATAKELMSRFALALSKLKDGTNTEDILKAYTNLTAAHSPGSNNGNAAMDTSDDESPLN---VKKGTKSFRYHSEVLKLDAEFDQTMEAFKKSQKYELKVAEETLREQLKHLNNLSKQLEKEKSELANQPNASHSSVLFQTVKKGEEQLRQEVMKLEEMKKIAKGCGRTSIDVLKLF 468

[Close]

BLAST of rna-XM_004496660.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D5AAN3|A0A9D5AAN3_PEA (Oberon-like PHD finger domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_065607 PE=4 SV=1)

HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0
Identity = 313/482 (64.94%), Postives = 379/482 (78.63%), Query Frame = 0

Query:    1 MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIG-DVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAI---DSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRGNNTEDILNVDDKLTAHSAGFSINGSAAMDTTD-DESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEESLNEHKKYLQNLYQQLDREKSELASQPNGSHSGVLFETVKERKEQLRRELMKFENMKRVANGFGSTSKDILEKYFGL 477
            ME E NS+N      LS      NL PVAP+QSG+GLPYAPENFPN GDIWRW+ G+R+++NGNFRDRYLYLP RL A    S RGGF SKL+VER +KE FPD +++DFFA FSWTIPS LP GN NP+  D LL Q EL++Q ESD  CDI GCKAGN  C+SLILEE+ ++SP  PCDICC E  FCRECCCILC K+VDS YGGYSYIMCKVK+GDNICGHV H+ECALR++ AGTVGG IGLD+EY+C RCDGRTELISHANK+L  CEAI   D +GDIKEK+L LG+CLL GS+K AAK+LMSRI  AMS LK G +TEDILN+  K+TA+S+G+   G+AA++TTD DE PL HL+V+ G K F Y SE  KL+AE D+ +E L KSQK+EY LAEESL+ HK+YL N+ QQLD +KS+LA Q   S S VL +T++++ E+LR+EL KFE MK++ANGFGSTSK++L+K+FGL
Sbjct:    1 MEFEGNSDNAGRRVNLS------NLAPVAPDQSGDGLPYAPENFPNPGDIWRWKAGRRISSNGNFRDRYLYLPRRLAA----SYRGGFKSKLAVERHVKEFFPDANIVDFFASFSWTIPSGLP-GNMNPVAADGLLHQLELKEQPESD--CDIGGCKAGNKTCTSLILEEQIENSPVAPCDICCVESKFCRECCCILCYKSVDSVYGGYSYIMCKVKLGDNICGHVCHLECALRSYSAGTVGGTIGLDSEYFCWRCDGRTELISHANKLLQTCEAIDTDDDDGDIKEKILKLGICLLRGSEKTAAKDLMSRITSAMSMLKHGTDTEDILNLGAKITANSSGY---GNAAIETTDVDEGPLKHLNVQKGTKSFRYESELSKLDAEFDKAMEDLEKSQKFEYKLAEESLHTHKEYLLNISQQLDNDKSDLAGQSRTSGSSVLLQTIEKKNEELRQELKKFEEMKKIANGFGSTSKEVLDKHFGL 466

[Close]

BLAST of rna-XM_004496660.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4WEV1|A0A9D4WEV1_PEA (Oberon-like PHD finger domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_065608 PE=4 SV=1)

HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0
Identity = 312/482 (64.73%), Postives = 376/482 (78.01%), Query Frame = 0

Query:    1 MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIG-DVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAI---DSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRGNNTEDILNVDDKLTAHSAGFSINGSAAMDTTD-DESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEESLNEHKKYLQNLYQQLDREKSELASQPNGSHSGVLFETVKERKEQLRRELMKFENMKRVANGFGSTSKDILEKYFGL 477
            ME E NS+N      LS      NL PVAP+QSG+GLP+APENFPN GDIWRW+ G+R+++NGNFRDRYLYLP RL A    S RGGF SKL+VER +KE FPD +++DFFA FSWTIPS LP GN NP+  D LL Q EL++Q ESD   DI GCKAGN  C+SLILEE+ ++SP  PCDICC E  FCRECCCILC K+VDSAYGGYSYIMCKVK+GDNICGHV H+ECALR++ AGTVGG IGLDAEY+C RCDGRTELISH NK+L  CEAI   D +GDIKEK+L L +CLL GS+K  AKELMSRI  AMSKLK G +TEDILNV  K+TA+S+G+   G+ AM+TTD DE  L HL+V+ G K F Y SE  KL+AE D+ +E L KSQK+EY LAEESL+ HK+YL N+ QQLD +KS+LA Q + S S VL +T++++ E+LR+EL KFE MK++ANGFGSTSK++L+K+FGL
Sbjct:    1 MEFEGNSDNAGRRVNLS------NLAPVAPDQSGDGLPFAPENFPNPGDIWRWKAGRRISSNGNFRDRYLYLPRRLAA----SYRGGFKSKLAVERHVKEFFPDANIVDFFASFSWTIPSGLP-GNMNPVAADGLLHQLELKEQPESD--SDIGGCKAGNKTCTSLILEEQIENSPVAPCDICCVESKFCRECCCILCYKSVDSAYGGYSYIMCKVKLGDNICGHVCHLECALRSYSAGTVGGTIGLDAEYFCWRCDGRTELISHVNKLLQTCEAIDTDDDDGDIKEKILKLAICLLRGSEKTTAKELMSRITSAMSKLKHGTDTEDILNVGAKITANSSGY---GNTAMETTDVDEGSLKHLNVQKGTKSFRYESELSKLDAEFDKAMEDLEKSQKFEYKLAEESLHTHKEYLLNISQQLDNDKSDLAGQSSTSGSSVLLQTIEKKNEELRQELKKFEEMKKIANGFGSTSKEVLDKHFGL 466

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BLAST of rna-XM_004496660.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4WHB1|A0A9D4WHB1_PEA (Oberon-like PHD finger domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_065608 PE=4 SV=1)

HSP 1 Score: 610.912 bits (1574), Expect = 0.000e+0
Identity = 312/482 (64.73%), Postives = 376/482 (78.01%), Query Frame = 0

Query:    1 MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIG-DVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAI---DSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRGNNTEDILNVDDKLTAHSAGFSINGSAAMDTTD-DESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEESLNEHKKYLQNLYQQLDREKSELASQPNGSHSGVLFETVKERKEQLRRELMKFENMKRVANGFGSTSKDILEKYFGL 477
            ME E NS+N      LS      NL PVAP+QSG+GLP+APENFPN GDIWRW+ G+R+++NGNFRDRYLYLP RL A    S RGGF SKL+VER +KE FPD +++DFFA FSWTIPS LP GN NP+  D LL Q EL++Q ESD   DI GCKAGN  C+SLILEE+ ++SP  PCDICC E  FCRECCCILC K+VDSAYGGYSYIMCKVK+GDNICGHV H+ECALR++ AGTVGG IGLDAEY+C RCDGRTELISH NK+L  CEAI   D +GDIKEK+L L +CLL GS+K  AKELMSRI  AMSKLK G +TEDILNV  K+TA+S+G+   G+ AM+TTD DE  L HL+V+ G K F Y SE  KL+AE D+ +E L KSQK+EY LAEESL+ HK+YL N+ QQLD +KS+LA Q + S S VL +T++++ E+LR+EL KFE MK++ANGFGSTSK++L+K+FGL
Sbjct:   27 MEFEGNSDNAGRRVNLS------NLAPVAPDQSGDGLPFAPENFPNPGDIWRWKAGRRISSNGNFRDRYLYLPRRLAA----SYRGGFKSKLAVERHVKEFFPDANIVDFFASFSWTIPSGLP-GNMNPVAADGLLHQLELKEQPESD--SDIGGCKAGNKTCTSLILEEQIENSPVAPCDICCVESKFCRECCCILCYKSVDSAYGGYSYIMCKVKLGDNICGHVCHLECALRSYSAGTVGGTIGLDAEYFCWRCDGRTELISHVNKLLQTCEAIDTDDDDGDIKEKILKLAICLLRGSEKTTAKELMSRITSAMSKLKHGTDTEDILNVGAKITANSSGY---GNTAMETTDVDEGSLKHLNVQKGTKSFRYESELSKLDAEFDKAMEDLEKSQKFEYKLAEESLHTHKEYLLNISQQLDNDKSDLAGQSSTSGSSVLLQTIEKKNEELRQELKKFEEMKKIANGFGSTSKEVLDKHFGL 492

[Close]

BLAST of rna-XM_004496660.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MWI3|A0A2K3MWI3_TRIPR (Oberon-like PHD finger domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g018344 PE=4 SV=1)

HSP 1 Score: 601.282 bits (1549), Expect = 0.000e+0
Identity = 313/499 (62.73%), Postives = 363/499 (72.75%), Query Frame = 0

Query:    1 MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIA-AGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPS----------------------------------------GNTNPIGDVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAIDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRGNNTEDILNVDDKLTAHSAGFSINGSAAMDTTDDESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEESLNEHKKYLQNLYQQLDREKSELASQPNGSHSGVLFETVKERKEQLRRELMKFENMKR 458
            MES+ NS+N   +   S      NLTPV PE+SG GLPYAPENFPN GDIWRW+ GKR++ NGNFRDRYLYLPPRL A A  +S RGGFASKL+VER+++E FP  ++ DFFA FSW IPS LP                                         GN NP  D L +QFELE+Q ES+  CDIDGCKAGN  CSSLILE+E    P MPCD CC E  FCRECCCILC K VDS +GG SYIMCKVK  D ICGHVAH+ECA RA+MAGT+GGMIGLDAEY+CRRC+GRTELI H  K+LL CE+IDS+ D+KE  LNLG+ LL GS+KAAAKELMSRIALA+SKLK G N EDILNV DK+TAHS+G S NG AA   T+DESPLN  +V  G  YF YRSE LK+EA++DQ LEALRKSQK+EY LAEE+L  H KYLQNL QQL++EKSELA QPN SHS VLF+TV++R+EQLR+ ++KFE MK+
Sbjct:    1 MESDGNSDNGGGSKKFS------NLTPVPPEESGVGLPYAPENFPNPGDIWRWKAGKRISNNGNFRDRYLYLPPRLSAPANRTSFRGGFASKLAVERYVRERFPKANISDFFASFSWRIPSGLPGVSPLSGRLGFVLCRSSFCIIWCCIGVPSPARAESLQHFIEGNMNPAVDEL-KQFELEEQEESNVPCDIDGCKAGNHKCSSLILEKES--PPVMPCDFCCAEPKFCRECCCILCYKAVDSTHGGCSYIMCKVKHDDTICGHVAHLECAFRAYMAGTLGGMIGLDAEYFCRRCNGRTELIPHVYKLLLTCESIDSD-DVKETFLNLGINLLHGSEKAAAKELMSRIALAVSKLKCGTNIEDILNVGDKVTAHSSGSSNNGEAA---TEDESPLNPSNVVNGTNYFRYRSEVLKIEADIDQGLEALRKSQKHEYKLAEENLRAHTKYLQNLLQQLNKEKSELACQPNTSHSSVLFQTVEKREEQLRQAMIKFEEMKK 486

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BLAST of rna-XM_004496660.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6PRC9|A0A2Z6PRC9_TRISU (Oberon-like PHD finger domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_46170 PE=4 SV=1)

HSP 1 Score: 597.816 bits (1540), Expect = 0.000e+0
Identity = 308/463 (66.52%), Postives = 360/463 (77.75%), Query Frame = 0

Query:    1 MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRLIA-AGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIGDVLLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAIDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRGNNTEDILNVDDKLTAHSAGFSINGSAAMDTTDDESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEESLNEHKKYLQNLYQQLDREKSELASQPNGSHSGVLFETVKERKEQLRRELMKFENMKRVANG 462
            MES+ NS+N   +   S      NL PV PE+SG GLPYAP NFPN GDIWRW+ GKR++ NGNFRDRYLYLP RL A A  +S RGGFASKL+VER+++E FP +++ DFFA FSW IPS LP GN NP  D L +QFELE+Q ES+  CDI GCKAGN  CSSLILE+E  + P MPCD+CC E  FC ECCCILC K VDS +GG SYIMCK K GD ICGHVAH++CA RA+ AGT+GGMIGLDAEY+CRRC+GRTELISH  KILL CEAIDS+ D+K   LNLG+ LL GS+KAAAKELMSR+ LA+SKLK G NTEDILNV +K+TAHS+G S NG A    T+DESPLN  +V  G   F YRSE LKLEA++D+ LEALRKSQKYEY LAEESL  H KYLQ L+QQL++EKSELA QPN SHS VLF+TV++RKEQLR+ ++KFE MK+ A G
Sbjct:    1 MESDGNSDNGGGSKIFS------NLAPVVPEESGEGLPYAPINFPNPGDIWRWKAGKRISNNGNFRDRYLYLPRRLSAPANRTSFRGGFASKLAVERYVREKFPKVNISDFFASFSWRIPSGLP-GNMNPSVDEL-KQFELEEQEESNVPCDIGGCKAGNQKCSSLILEKE--YPPVMPCDLCCAEPKFCGECCCILCYKAVDSTHGGCSYIMCKEKHGDTICGHVAHLKCAFRAYTAGTLGGMIGLDAEYFCRRCNGRTELISHVYKILLTCEAIDSD-DVKAFFLNLGINLLHGSEKAAAKELMSRLTLAVSKLKCGTNTEDILNVCNKVTAHSSGSSYNGEA----TEDESPLNPSNVVNGTDNFWYRSEVLKLEADIDEGLEALRKSQKYEYKLAEESLRAHVKYLQTLFQQLNKEKSELACQPNASHSSVLFQTVEKRKEQLRQGMIKFEEMKKKAIG 448

HSP 2 Score: 453.366 bits (1165), Expect = 1.205e-146
Identity = 240/415 (57.83%), Postives = 288/415 (69.40%), Query Frame = 0

Query:    1 MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDIWRWRTGKRVAANGNFRDRYLYLPPRL-IAAGHSSGRGGFASKLSVERFLKESFPDIDVLDFFAKFSWTIPSTLPSGNTNPIGDV-LLQQFELEKQSESDFLCDIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKTVDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEYYCRRCDGRTELISHANKILLVCEAIDSEGDIKEKMLNLGMCLLCGSQKAAAKELMSRIALAMSKLKRGNNTEDILNVDDKLTAHSAGFSI--NGSAAMDTTDDESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEESLNEHKKYLQN 411
            M+S+ NSNNH+  N    +N   NL PVAP+QSG GLPYAPEN PN GDIWRW+ GKR++ NGNFRDRYLYLP      A  +S  GGF SK +V R+LKE FP I++ +FF+ FSW IPS LP GN NP  D  L      E   E+    +I GCKAGN  CSSLILE E      MPC+ CC E  FCR+CCCILC K VDSA+GGYSYIMC+ K GDNICGH+ H+ECA R + AGT+GG+  LDAEY+C RC+G+TELISH +K+LL  E IDS+ D+KEKMLNLG+ LL GS+KAAAK+LMSRIALA+SKLK G+NT+DI NV D++ AH +G     NG AA+    DESPLNH +V    K F  +   LKLE+E+DQ L+  RK  K EY LAEE  N    Y  N
Sbjct:  566 MDSKGNSNNHNVIND-GGNNRFQNLPPVAPKQSGEGLPYAPENIPNPGDIWRWKVGKRISNNGNFRDRYLYLPRHPSTPANRTSYSGGFPSKPAVRRYLKEKFPHINIHEFFSSFSWNIPSGLP-GNMNPTADHDLFPPMGFEAPKETVIPSNIGGCKAGNKNCSSLILERECPF--VMPCEFCCAEPKFCRKCCCILCKKAVDSAHGGYSYIMCEKKHGDNICGHLCHLECAFRTYKAGTLGGVFDLDAEYFCWRCNGKTELISHVSKLLLTYEGIDSDDDVKEKMLNLGINLLRGSEKAAAKKLMSRIALAISKLKPGSNTKDIFNVADEVRAHFSGCCKCNNGEAAI---KDESPLNHSNVGNETKDFRRQFGILKLESEIDQDLKDFRKPPKQEYQLAEEKPNMSNIYRSN 973

The following BLAST results are available for this feature:

BLAST of rna-XM_004496660.3 vs. Araport11
BLAST of rna-XM_004496660.3 vs. UniProtKB/Swiss-Prot
BLAST of rna-XM_004496660.3 vs. UniProtKB/TrEMBL

BLAST of rna-XM_004496660.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 9


Match Name	E-value	Identity	Description
\|	1.490e-124	45.89	Symbols: no symbol available \| no full name availa...	[more]
\|	9.254e-105	44.42	Symbols: no symbol available \| no full name availa...	[more]
\|	5.231e-23	42.11	Symbols: no symbol available \| no full name availa...	[more]
\|	1.886e-22	48.48	Symbols: no symbol available \| no full name availa...	[more]
\|	1.886e-22	48.48	Symbols: no symbol available \| no full name availa...	[more]
\|	1.886e-22	48.48	Symbols: no symbol available \| no full name availa...	[more]
\|	1.067e-7	27.40	Symbols: OBE1 \| OBERON1 \| chr3:2484986-2486876 FOR...	[more]
\|	1.444e-7	27.40	Symbols: OBE1 \| OBERON1 \| chr3:2485104-2486876 FOR...	[more]
\|	1.444e-7	27.40	Symbols: OBE1 \| OBERON1 \| chr3:2485104-2486876 FOR...	[more]

BLAST of rna-XM_004496660.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
sp\|Q10PC5\|TTA1_ORYSJ	2.942e-8	22.93	Protein TITANIA OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of rna-XM_004496660.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A1S2XZ28\|A0A1S2XZ28_CICAR	0.000e+0	100.00	OBERON-like protein isoform X2 OS=Cicer arietinum ...	[more]
tr\|A0A1S3E501\|A0A1S3E501_CICAR	0.000e+0	97.95	Uncharacterized protein LOC101515003 isoform X1 OS...	[more]
tr\|A0A3Q7Y9X8\|A0A3Q7Y9X8_CICAR	0.000e+0	97.12	Uncharacterized protein LOC101515003 isoform X3 OS...	[more]
tr\|A0A9D4WE12\|A0A9D4WE12_PEA	0.000e+0	67.99	Oberon-like PHD finger domain-containing protein O...	[more]
tr\|A0A072VQ13\|A0A072VQ13_MEDTR	0.000e+0	66.02	CDPK adapter protein, putative OS=Medicago truncat...	[more]
tr\|A0A9D5AAN3\|A0A9D5AAN3_PEA	0.000e+0	64.94	Oberon-like PHD finger domain-containing protein O...	[more]
tr\|A0A9D4WEV1\|A0A9D4WEV1_PEA	0.000e+0	64.73	Oberon-like PHD finger domain-containing protein O...	[more]
tr\|A0A9D4WHB1\|A0A9D4WHB1_PEA	0.000e+0	64.73	Oberon-like PHD finger domain-containing protein O...	[more]
tr\|A0A2K3MWI3\|A0A2K3MWI3_TRIPR	0.000e+0	62.73	Oberon-like PHD finger domain-containing protein O...	[more]
tr\|A0A2Z6PRC9\|A0A2Z6PRC9_TRISU	1.205e-146	66.52	Oberon-like PHD finger domain-containing protein O...	[more]

InterPro

Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032881	Oberon-like, PHD finger domain	PFAM	PF07227	PHD_Oberon	coord: 158..290 e-value: 2.2E-27 score: 106.9
None	No IPR available	PANTHER	PTHR33345	ADAPTER PROTEIN, PUTATIVE-RELATED	coord: 13..477

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:13640499..13643587-
coding sequence from alignment at chr4:13640499..13643587-

mRNA sequence

>rna-XM_004496660.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496660.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496660.3; organism=Cicer arietinum; type=mRNA; length=1434bp
ATGGAATCTGAATCAAACTCTAATAATCACGATTTTACCAATGCTTTATC
CCACAGCAACAACTCGTTAAATCTTACTCCTGTTGCGCCGGAACAATCCG
GCAACGGTTTACCCTATGCGCCGGAAAATTTTCCTAATTCTGGTGATATT
TGGAGATGGAGAACAGGTAAAAGAGTTGCAGCCAACGGTAACTTTCGTGA
CCGGTATCTATATCTTCCTCCTCGTCTTATCGCTGCTGGACACAGCTCTG
GACGTGGCGGATTTGCGAGCAAGCTTTCGGTTGAACGCTTCCTCAAAGAA
TCATTTCCTGATATTGATGTTCTTGATTTCTTCGCTAAATTCAGCTGGAC
AATTCCGTCTACTCTGCCATCAGGCAATACAAATCCGATAGGTGATGTAC
TTCTTCAACAGTTTGAATTAGAAAAACAATCAGAATCCGATTTCCTCTGT
GACATTGATGGATGCAAAGCTGGGAATCTGATGTGCAGCAGCTTGATTCT
GGAAGAAGAAAAAAAACATTCACCAGCCATGCCATGTGATATCTGTTGCA
CTGAACTTAATTTTTGCCGTGAATGTTGTTGCATTCTTTGTTGCAAAACT
GTTGATTCAGCTTATGGTGGCTATAGTTATATCATGTGCAAAGTAAAAGT
TGGCGATAATATTTGTGGGCATGTTGCTCATATGGAATGTGCTCTTCGAG
CTCACATGGCTGGCACAGTTGGAGGAATGATTGGATTGGATGCTGAGTAT
TATTGCCGGCGCTGTGATGGGAGGACTGAACTGATTTCTCATGCAAATAA
GATTCTACTGGTTTGTGAAGCTATTGATTCAGAGGGTGATATTAAGGAAA
AAATGTTAAATCTTGGTATGTGTCTTTTGTGTGGTTCACAGAAAGCCGCT
GCAAAGGAGCTTATGAGTCGTATTGCATTGGCTATGTCAAAGCTTAAACG
TGGGAATAATACTGAAGATATCTTGAATGTCGATGACAAACTTACCGCTC
ATTCTGCAGGTTTCTCCATTAATGGCAGTGCTGCGATGGATACTACAGAT
GATGAAAGCCCCTTAAACCATTTAGATGTAAGAATAGGGAAAAAATATTT
TGGCTATCGATCAGAGTCATTAAAACTTGAGGCTGAGGTTGATCAAGTTC
TGGAGGCTCTTAGAAAGTCACAGAAGTATGAATATAACTTGGCAGAAGAA
AGCCTTAATGAACACAAGAAATATTTACAAAATCTTTATCAGCAACTGGA
CAGAGAGAAGTCTGAATTAGCAAGTCAACCCAATGGATCTCATTCAGGTG
TCTTGTTTGAAACTGTGAAGGAAAGAAAGGAACAATTAAGGAGGGAACTC
ATGAAATTTGAAAATATGAAAAGGGTAGCCAATGGTTTTGGCAGCACATC
TAAAGATATTTTAGAGAAATACTTTGGCTTGTAA

protein sequence of rna-XM_004496660.3_CaCDCfrontier-NCBI_v1

>rna-XM_004496660.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496660.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496660.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=477bp
MESESNSNNHDFTNALSHSNNSLNLTPVAPEQSGNGLPYAPENFPNSGDI
WRWRTGKRVAANGNFRDRYLYLPPRLIAAGHSSGRGGFASKLSVERFLKE
SFPDIDVLDFFAKFSWTIPSTLPSGNTNPIGDVLLQQFELEKQSESDFLC
DIDGCKAGNLMCSSLILEEEKKHSPAMPCDICCTELNFCRECCCILCCKT
VDSAYGGYSYIMCKVKVGDNICGHVAHMECALRAHMAGTVGGMIGLDAEY
YCRRCDGRTELISHANKILLVCEAIDSEGDIKEKMLNLGMCLLCGSQKAA
AKELMSRIALAMSKLKRGNNTEDILNVDDKLTAHSAGFSINGSAAMDTTD
DESPLNHLDVRIGKKYFGYRSESLKLEAEVDQVLEALRKSQKYEYNLAEE
SLNEHKKYLQNLYQQLDREKSELASQPNGSHSGVLFETVKERKEQLRREL
MKFENMKRVANGFGSTSKDILEKYFGL

mRNA from alignment at chr4:13640499..13643587-

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-XM_004496660.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496660.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496660.3; organism=Cicer arietinum; type=mRNA; length=3089bp; location=Sequence derived from: chr4:13640499..13643587- (Cicer arietinum
TATTAAAACATAGGTTGATAAACGGGAAGAGCAGACATTGATCAACTCTC
TGACCTTTGTCGGAAGCAGCTAATCTCACTCTCATTCTTCTTTCTTCATT
CTCAATTTCAACCCTTTTTCTCCCGCCATTTTCACAACAACGAAAAATTT
AAATTCATCGATCAAACAAAAATTAAATATCTCAACCTAACCAACACATC
GCTTCGTGCCCCTTCAACAACTATAAACCCTAGCATTGATGGAATCTGAA
TCAAACTCTAATAATCACGATTTTACCAATGCTTTATCCCACAGCAACAA
CTCGTTAAATCTTACTCCTGTTGCGCCGGAACAATCCGGCAACGGTTTAC
CCTATGCGCCGGAAAATTTTCCTAATTCTGGTGATATTTGGAGATGGAGA
ACAGGTAAAAGAGTTGCAGCCAACGGTAACTTTCGTGACCGGTATCTATA
TCTTCCTCCTCGTCTTATCGCTGCTGGACACAGCTCTGGACGTGGCGGAT
TTGCGAGCAAGCTTTCGGTTGAACGCTTCCTCAAAGAATCATTTCCTGAT
ATTGATGTTCTTGATTTCTTCGCTAAATTCAGCTGGACAATTCCGTCTAC
TCTGCCATCAGGTCTGTTTCTTCGCTCTGTGTTGATATTATTTTTAAATG
CTTCGTTATTTGTTTTGATTGATGCTGTTTGTTTGATCCTGAAAATGAAA
TATGTTCGCGTTTGTTAATTAGTATAAGAGATAGCAAAATATAAATTTTC
AAATTAACGGAATAAGAATTTCTATGTATTTTGTGATTCCTCATTTCTTG
AGAATGGAGAATTTGCCTAGTCTGGATTAGCTTCTAGTTTATTGAAATTT
CTCAATTCAAATAAGTATTTAATTTCTTACTATGAAAAAATATATCACAT
GGGGCTGACGGGGAGTAATCGCGGGTGTTAAAGATGACTAGATGAGGCAT
GAACAAGGAGTGATTCATCATTACAGACTTGTAGGAATTGATTTGGACTA
CCTATAGAAACAAACAATTTGCATCTACTTCTTGAGTTTTCATAACTTAG
GAACTGTGGTCTGTGCAGATAAGCGCGCTTGACTTTGAGTAATCCTATGA
TGAGTGTCAAGCTGATAAATTATCTTAGGAAACGTGAGTAAGAACAATAT
ACACTCATGTTATACGAATGGGCTTTTGAAAACCCGAGCTGTAAAAGCTC
ATTTTAACTTATGTTAGAACTTATTATTTAGAAAACTCATAGTTATTATA
GATCGTTGTAAATAATCTTTTTATAGGAGTGCTTGTTTAAAGTGGAATTA
AAATGAGCCTTAGATTACACAATTGTCTGCTAAACAGTAGGATACATGTC
AACTTGCTTAGAATTCTAGTTTACTGCGAAGGAAACAATTGTCTCTGTTT
AGGAATGTCTAAGACTTTTCACGGTTCTTTTTTTTTTTTAATGTAAATTC
CTTTATTAGTTGTTGTAATGCTTTTCTGCGCCTTAAGATGATTACAATGT
TACAAAAACAGACAAGGTTGTTCTGCATTGTAGGCAATACAAATCCGATA
GGTGATGTACTTCTTCAACAGTTTGAATTAGAAAAACAATCAGAATCCGA
TTTCCTCTGTGACATTGATGGATGCAAAGCTGGGAATCTGATGTGCAGCA
GCTTGATTCTGGAAGAAGAAAAAAAACATTCACCAGCCATGCCATGTGAT
ATCTGTTGCACTGAACTTAATTTTTGCCGTGAATGTTGTTGCATTCTTTG
TTGCAAAACTGTTGATTCAGCTTATGGTGGCTATAGTTATATCATGTGCA
AAGTAAAAGTTGGCGATAATATTTGTGGGCATGTTGCTCATATGGAATGT
GCTCTTCGAGCTCACATGGCTGGCACAGTTGGAGGAATGATTGGATTGGA
TGCTGAGTATTATTGCCGGCGCTGTGATGGGAGGACTGAACTGATTTCTC
ATGCAAATAAGATTCTACTGGTTTGTGAAGCTATTGATTCAGAGGGTGAT
ATTAAGGAAAAAATGTTAAATCTTGGTATGTGTCTTTTGTGTGGTTCACA
GAAAGCCGCTGCAAAGGAGCTTATGAGTCGTATTGCATTGGCTATGTCAA
AGGTATTGTTCAATTAATTTCAGGTGATAGATAAAATGGATTTCTTGCTT
TTCCTGTATTTAACCTCGAAAGGCAGTTGTTTGATGAATTTGGTAGTTTA
CTTCAGCTTAAACGTGGGAATAATACTGAAGATATCTTGAATGTCGATGA
CAAACTTACCGCTCATTCTGCAGGTAAATGTCCTGTTAATAATAGTCAAA
TTACTTACTACTTTAGCACTGGTTGTGTGCTTATGAAGGTGAAAAACTTT
CCCTCTCCCACTCTAATGTAAAAATGTCGAAAAGAAAATGGCAATGTGTT
GAACATTTTGTTTATCAACAGGTTTCTCCATTAATGGCAGTGCTGCGATG
GATACTACAGATGATGAAAGCCCCTTAAACCATTTAGATGTAAGAATAGG
GAAAAAATATTTTGGCTATCGATCAGAGTCATTAAAACTTGAGGCTGAGG
TTGATCAAGTTCTGGAGGCTCTTAGAAAGTCACAGAAGTATGAATATAAC
TTGGCAGAAGAAAGCCTTAATGAACACAAGAAATATTTACAAAATCTTTA
TCAGCAACTGGACAGAGAGAAGTCTGAATTAGCAAGTCAACCCAATGGAT
CTCATTCAGGTGTCTTGTTTGAAACTGTGAAGGAAAGAAAGGAACAATTA
AGGAGGGAACTCATGAAATTTGAAAATATGAAAAGGGTAGCCAATGGTTT
TGGCAGCACATCTAAAGATATTTTAGAGAAATACTTTGGCTTGTAAATTG
CATACAAAAATGATAAATTTTCTGAAGATATGATGATGTAAAATGTTTCA
AGTGGCTTGCGGAACGTTGGCAACGAACTATGTATATTCATTAAGCCACC
GAATCAGGATTTTTCATGTGGTATTTGAGTGACAGGTTATAGAGATTAGA
GATGAGGGCAGTTGCCTAAGATGGTGTTGGATAAATTATCCATGACAAAG
GTCTTTCTTCCTACCAAATACATGTTCTTAGTGACAAAA

Coding sequence (CDS) from alignment at chr4:13640499..13643587-

>rna-XM_004496660.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496660.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496660.3; organism=Cicer arietinum; type=CDS; length=1434bp; location=Sequence derived from: chr4:13640499..13643587- (Cicer arietinum
ATGGAATCTGAATCAAACTCTAATAATCACGATTTTACCAATGCTTTATC
CCACAGCAACAACTCGTTAAATCTTACTCCTGTTGCGCCGGAACAATCCG
GCAACGGTTTACCCTATGCGCCGGAAAATTTTCCTAATTCTGGTGATATT
TGGAGATGGAGAACAGGTAAAAGAGTTGCAGCCAACGGTAACTTTCGTGA
CCGGTATCTATATCTTCCTCCTCGTCTTATCGCTGCTGGACACAGCTCTG
GACGTGGCGGATTTGCGAGCAAGCTTTCGGTTGAACGCTTCCTCAAAGAA
TCATTTCCTGATATTGATGTTCTTGATTTCTTCGCTAAATTCAGCTGGAC
AATTCCGTCTACTCTGCCATCAGGCAATACAAATCCGATAGGTGATGTAC
TTCTTCAACAGTTTGAATTAGAAAAACAATCAGAATCCGATTTCCTCTGT
GACATTGATGGATGCAAAGCTGGGAATCTGATGTGCAGCAGCTTGATTCT
GGAAGAAGAAAAAAAACATTCACCAGCCATGCCATGTGATATCTGTTGCA
CTGAACTTAATTTTTGCCGTGAATGTTGTTGCATTCTTTGTTGCAAAACT
GTTGATTCAGCTTATGGTGGCTATAGTTATATCATGTGCAAAGTAAAAGT
TGGCGATAATATTTGTGGGCATGTTGCTCATATGGAATGTGCTCTTCGAG
CTCACATGGCTGGCACAGTTGGAGGAATGATTGGATTGGATGCTGAGTAT
TATTGCCGGCGCTGTGATGGGAGGACTGAACTGATTTCTCATGCAAATAA
GATTCTACTGGTTTGTGAAGCTATTGATTCAGAGGGTGATATTAAGGAAA
AAATGTTAAATCTTGGTATGTGTCTTTTGTGTGGTTCACAGAAAGCCGCT
GCAAAGGAGCTTATGAGTCGTATTGCATTGGCTATGTCAAAGCTTAAACG
TGGGAATAATACTGAAGATATCTTGAATGTCGATGACAAACTTACCGCTC
ATTCTGCAGGTTTCTCCATTAATGGCAGTGCTGCGATGGATACTACAGAT
GATGAAAGCCCCTTAAACCATTTAGATGTAAGAATAGGGAAAAAATATTT
TGGCTATCGATCAGAGTCATTAAAACTTGAGGCTGAGGTTGATCAAGTTC
TGGAGGCTCTTAGAAAGTCACAGAAGTATGAATATAACTTGGCAGAAGAA
AGCCTTAATGAACACAAGAAATATTTACAAAATCTTTATCAGCAACTGGA
CAGAGAGAAGTCTGAATTAGCAAGTCAACCCAATGGATCTCATTCAGGTG
TCTTGTTTGAAACTGTGAAGGAAAGAAAGGAACAATTAAGGAGGGAACTC
ATGAAATTTGAAAATATGAAAAGGGTAGCCAATGGTTTTGGCAGCACATC
TAAAGATATTTTAGAGAAATACTTTGGCTTGTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR032881	Oberon-like_PHD

Search form

rna-XM_004496660.3