Psat4g006520.1

Transcript Overview


Name	Psat4g006520.1
Unique Name	Psat4g006520.1_Ps_Cameor_v1a
Type	mRNA
Organism	Pisum sativum (pea)
Sequence length	4753

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr4LG4	supercontig	chr4LG4:6953417..6958169 +	Pisum sativum Cameor genome v1a	n/a
chr4LG4	supercontig	chr4LG4:6953417..6958169 +	Pisum sativum Cameor genome v1a	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan: P. sativum Cameor genome v1a	2019-09-12
BLAST: P. sativum Cameor genome v1a vs. Swissprot	2019-09-12
Pisum sativum Cameor genome v1a	2019-09-06

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
ccpsL363	Cajanus cajan Asha genome v1.0	Cajanus cajan
pszwsR282	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
pszwsR306	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
pstifR273	Vicia faba cv. Tiffany genome v1.0	Vicia faba
pstifR369	Vicia faba cv. Tiffany genome v1.0	Vicia faba
psvfhR268	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
psvfhR359	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
psvssR344	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
psvssR430	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccapsL193	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccapsL713	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
psvvaR323	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
psvvaR389	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Psat04G0017700-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Psat4g006520	Psat4g006520_Ps_Cameor_v1a	Pisum sativum	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Psat4g006520.1	Psat4g006520.1_Ps_Cameor_v1a-protein	Pisum sativum	polypeptide
Psat4g006520.1_Ps_Cameor_v1a	Psat4g006520.1_Ps_Cameor_v1a	Pisum sativum	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Psat4g006520.1.cds1	Psat4g006520.1.cds1_Ps_Cameor_v1a	Pisum sativum	CDS
Psat4g006520.1.cds2	Psat4g006520.1.cds2_Ps_Cameor_v1a	Pisum sativum	CDS
Psat4g006520.1.cds3	Psat4g006520.1.cds3_Ps_Cameor_v1a	Pisum sativum	CDS
Psat4g006520.1.cds4	Psat4g006520.1.cds4_Ps_Cameor_v1a	Pisum sativum	CDS
Psat4g006520.1.cds5	Psat4g006520.1.cds5_Ps_Cameor_v1a	Pisum sativum	CDS
Psat4g006520.1.cds6	Psat4g006520.1.cds6_Ps_Cameor_v1a	Pisum sativum	CDS
Psat4g006520.1.cds7	Psat4g006520.1.cds7_Ps_Cameor_v1a	Pisum sativum	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Psat4g006520.1.exon1	Psat4g006520.1.exon1_Ps_Cameor_v1a	Pisum sativum	exon
Psat4g006520.1.exon2	Psat4g006520.1.exon2_Ps_Cameor_v1a	Pisum sativum	exon
Psat4g006520.1.exon3	Psat4g006520.1.exon3_Ps_Cameor_v1a	Pisum sativum	exon
Psat4g006520.1.exon4	Psat4g006520.1.exon4_Ps_Cameor_v1a	Pisum sativum	exon
Psat4g006520.1.exon5	Psat4g006520.1.exon5_Ps_Cameor_v1a	Pisum sativum	exon
Psat4g006520.1.exon6	Psat4g006520.1.exon6_Ps_Cameor_v1a	Pisum sativum	exon
Psat4g006520.1.exon7	Psat4g006520.1.exon7_Ps_Cameor_v1a	Pisum sativum	exon

Homology

[Close]

BLAST of Psat4g006520.1 vs. DB:Swiss
Match: RNHX1_ARATH (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.514e-7
Identity = 33/100 (33.00%), Postives = 50/100 (50.00%), Query Frame = 1

Query: 1789 GGWLSGFHKTIGDCNSLVAEFSSVLTGLELAWKRGFKNLIVQVDNKMIVDALQGSPLKPKQCSTLARRILLLLQHFEEVQFIHIFREANKCADFFSQAKF 2088
            G W  GF   IG C++  AE   V  GL  AW++    + ++VD+++IV  L+         S L R     LQ    V+ +H++REAN+ AD  +   F
Sbjct:  486 GAWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLVRLCHGFLQKDWLVRIVHVYREANRLADGLANYAF 585

The following BLAST results are available for this feature:

BLAST of Psat4g006520.1 vs. DB:Swiss

BLAST of Psat4g006520.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
RNHX1_ARATH	1.514e-7	33.00	Putative ribonuclease H protein At1g65750 OS=Arabi...	[more]

InterPro

Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 114..141
None	No IPR available	COILS	Coil	Coil	coord: 171..191
None	No IPR available	CDD	cd06222	RNase_H_like	coord: 595..690 e-value: 5.67477E-24 score: 95.4588
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 588..698 e-value: 5.0E-13 score: 51.2
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10		coord: 249..406 e-value: 5.8E-12 score: 47.9
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 246..406
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 595..693 e-value: 2.6E-21 score: 75.7
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 594..693

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4LG4:6953417..6958169+
coding sequence from alignment at chr4LG4:6953417..6958169+

mRNA sequence

>Psat4g006520.1_Ps_Cameor_v1a ID=Psat4g006520.1_Ps_Cameor_v1a; Name=Psat4g006520.1; organism=Pisum sativum; type=mRNA; length=4753bp
ATGCCAACTTTCATTGGCAATAGGATATGGAAAGCCATCAAAGTTGACAA
GAACATTTTATCTATAGAAAAAGGGAAATATGCTCGGTTATGTATTCAAG
TTGACCTCACTAAACCGTTGTTGGATATGTTTACCATTAAGGGTAGACAC
TTCAAGGCTGAATATGAAGGTCTACATATCCTCTATCTGCAATATGGTAA
GTATGCTCATACTGCTGAAGGATATGAAGCTAAAATGGTGGTTGGAACCA
GCAAAGATGGTGGAACCAAGTGTGTCTTCAATGAAAAAAGCAACACATAG
ATTCAAGATAGAGATCAAGGGCCCTAACAAGGTTCGTGAGCTATTGTTCA
AAAGGTCAAACGTGGCATAAGAGCTAAACAGGCCAATTCTAAAGATGATG
CGAGTGAAAAGAGAAGTAAAGAGCTTCCCAATATTAGAGGCTCTAGATTC
CAAGATCTTCTTAACGATAACCTCAAAGATGTTTCTCTACATCCCAATGA
GACTCCTAAAACTCCTCAATAAGACCATTCTAGAATAAAGGAAATAGTGA
AGATAGTTCTATGTTAAGAAGTAACCAATCTCAAACTCAGGATTCCTTTG
AGAAACCTAAGAATCCATAAGGTCACAACAATTTGGTTCATAGGAGAAAC
AAGTATAAGAAAAATAAAAAAGAGAAACCCTTTGACAAACATCTAGAGAT
CGCTCCTAGAGGCATTAACAAGGCTAAGGACAAGGAGCAAGGACATGAAA
AAAACAAGGAAAATCTTGAGCGTCTCCTAGAGGAAGAGACATTGGAAGAG
TTAGTAAAAGCGGCTCAAGTGTACACTTCCAAAGTTGTGATTCATAATCA
TCATAATGGGAGATTTCATGGGCAAAAATCCAATTTGGATCAACTTAGAC
AGAATGGGATAAGGGCTCAAGGTGATAAAGATGAGCAACAACAAAAACCT
AACTCTTCTCCCAACATTATAACTCCCAACTTTGAAGGAAGTTTATTCCA
AACAGATGTTAGTCAAGAGAAGAATGATTACATGGAAAAGGTTGATAGAC
TATGGTGGCATCAATGCATAATAGTTTATAAGGGCTTTTCTCCTCCTGCA
CTGTGTTTTATGATCAATCAAAATCTTTCCTGTCTATTTTGGAATTATCG
TGGAGCTAGTAGTAAGGCTTCCTTTCGTATTTTTAATTCTTACATTCAAG
CAAAGAGACCTGACATGTTAGTTATCATGGAAACTTGCTCTAATCCTAGT
TATCTTAATTAAGCCTTCTCTCGTTTGGGTTTCACTGGTTTTTCCTTTTC
TCAAGCTAGAGGTTTTGCTGGTGGCATAGCCACAAGATGGAAAACTGAAA
AGCTGCAAGTTCACATTTTAAAGCGTCATTTCTAGTTTATTCATTCTCAA
ATTATCACTGGGGAAGGTAAATTATGGCACCTTTTTGTTGTCTATGTCAG
CCCCTTGGAACACAGAAAGAAAGAGCTTTGGAATGAGTTGACGGATAGTG
TGACTTCTATTTCTACTGGTTGGATTTGTTGGGGGGATTTCAATGATATC
CTTCATATGAACAAGAAAAAAGGCGGGCTTCCGTCTTCCCTTCAAAGATG
TACCCTGTTTCAAAATCGCATTAATAATTATAACCTTATTGACATGGGTA
ACTCTAGCTTTTTTTACACATGGAAAGGTCCACTGACTCATGGTGGAATG
AGGATTTATGAAGAGCTTGATCATGTTTTATGCAATTCCATATGGAGGAA
TATGTACCTTGAAGCCCATGTTAGGGTTCTTCATAGGATGGAGTTCTCTG
ATCATCATCATGTGTTTCTCACCCTCATGGATAAGGAGTTTAGACAGGTG
CCTAAGTCCTTTAAATTTGAGTGTGCTCGGTTGTTTGAAAATTCTTTTGA
GGATATGTTGAAGCCTGCTTGGAATATTCATCATCTTCTCCTTCGCAATT
CGGATTCCTTTAAAACCACTACTTTGCAGTGGAAACTTCAAAATATTGGG
AGTATTCAAAGAAATAAAATTCACCTTCTTAGTCCTCTCCAAGGTATTAA
AAAAGCTATTCAGAATGACAGAGATCATGAAGGGGTCAAAAAGGTTGAAA
AGCATATCAAAGTTAATCTCTCTAAGATTTTTATACCAAGAGGAACTTAT
TTGGTATCAACATGCAAAGATTAATTGGATGGTGAAAGGTGATAGGAACA
CCAACTTCTACCACACTAGGGTTATGCAACGGAGAAGAATAAAAGTGATT
AATTTACTTAAAGATAACAACAACAATTGGATTGAAGATGAAAATAGCAT
TAGACCTTTGTTCAAAGATCATTTCAAAAACCTCTTAACTTCAGATGTCA
TCACTTCTGACTAGTTTCAGACAACCCAACACTTCCCTGCGCTTGATAAA
TGTGTTTACAATTTGAGGTACAAGACTCAGAGATCAAGCAGGCGCTTCTT
GACATGGCGGCTTGGAAGTCTCTTGGAATGGATGACTTTCCTGCAGATTT
CTATTAAAATACTTGGAACCACATTGGTGAGAATCTTCGCTCCTTTATTC
ATCATCTGTGGCACAAGGATATTTCCCTGAAAGACATTAATTTTACAGAC
ATCTGTTTGATTCCTAAACTTGATAATCCCCAGTTGGTTACCTAATTCAG
GCCTATCGTGTTATGAAACACAATCTATAAAGTTTTTTCCAAGGTCATTG
TCAATAGACTCAAGCTCCACATGGATAACATAATCTCCCCTAACCAATCT
GGCTTCATCTCCAATAGAAGCACCCATGATAACATTGTCATTGCACAGGA
AATTCTTCATAGTACTCACAGATCGAAGCGGAAAGTAGGTTCCTTCGCCA
TCAAGTTTGATCTTGTTAAGGCCTGCGATAACATGAGCTGGAACTTCATT
AGCAATGTCCTTACTAAAGTTGGATCCATGTTAACCTGAAAGAGCTCATT
ATGCTTGTTATAACCTCGATCAATTTAAGGGTGCTTTGGAAAGGTGATAT
CAGTGAGTTCTTTAAGGCCAACAAATTAAGGCTTAACACAAGGTGATCCC
ATGTCTCTATATTTTTTGTCCTTTGTATATATAAACTCTCACGCTTGATT
CATGATGCAGTGGAGATCACCAAATGGCAATGCTTAAAGATGGCTAAAGT
GGGTCCTAAGGTGTCCCATCTCATGTTCACAAATGACCTCATTGTGTTTA
GTTCTGCCTCTGAAGCTCAAATAAGTGTGGTTATGGACATTCTTTCCCAA
TTATATAACTCTTTTGGGTAACATATTAATATGGATAAATCCAACATTAT
GTTTTCTGGAAATACCATTATCTTATTTAGAAGGTTCAATTTAAGCTTGC
CCATTGGAAGAGCAGACAACTCTCTTTCGATGGCAGGGTCACTTTGGCTA
AGGTTGTGATTGAGGCCTTGCCGACTTGCACTATGATGTATGTTCTCATT
CCTCAAAAGTGTATAACAAAGATTCATCAGTGTCAGAGATCATTTATATG
AGGTGATTCTCTTGAGAAAATTCATATGCATTCTATCCGTTGGAGCACCA
TTAGCAAAGGGAAGCATCTTGGTGGCCTTGGCCTTCCAATTTATCGATCC
TGAACAAAGCTTGTCTTTCCAAGATAGGATGTCATAACTAATTTTCAGCT
TGTGTCTGATCTCTTGAATGCTGCTGGAAAATGGAACTGGAGTTTAATTA
GTAGGTTTTTTCCTCATCCCATATAGATAAAATCCGTGATATCCCCCTCC
CTCTTTAGCAGGCCCTATTCCTGATAGTTGTATCTGGGGTGGGATAAATT
TCGAGTCATTCTCCATCTCTAGCATGTATGGTTTCTTGAATCAGAACTCG
ATTGATGAGTCTAGTTTTCACTGGGATGCTATCTAGAAGTTGCAGGTCCT
TGAGCGTATTCATAACTTCATATGGAAAGTCCGCTATAATGGTCTTATTA
AAAATGCTTCTCTTAATCATCTTCAGCTGAGGAATAATCTTTGTGATCTT
TGTGGGTTTCATCCAAAGTCTATTCTTCACGCCCTTCGTGATTGGATTTT
TCCCAAAAAGATGTTGGAATCAATTCGTCATCCACATCAACAAGACGCAT
TTTTCTCCTCTTCGTTGCCTGGCTAACTTGAGCTTAATACCACTCAGCAA
ATGCATAATATTGTTGTTGACTGGTCTGCGTTGTGGGCTTTCGTGTGCCA
TCTTCTATGGACCTAGAGGAATAAACAACTTCATGACCCCCATTATATTA
TGCCCTAGAATTTGGTTTATAAGGTCCGTAAGTTTGCTTCTCTTTACCCT
ACCAGCATGAGACTTTCCCTTAAAGTGCAACCTTTGATTGATGGCCCAAA
TTTAGTTTAGTGGTGCCCATCTCCCTTTGAGTAGGGTTTGTTTACTAGCG
GATTACTTGCTAAGTGTGAGGGCTTTTTTTGTGACAGTCAAGGAGGATGG
CTTAGTGGCTTTCATAAGACTATTGGTGATTGCAATAGTCTTGTTGCAGA
GTTCTCGAGTGTCCTTACGGGTTTGGAGCTTGCTTGGAAGAGAGGTTTCA
AGAACCTTATTGTTCAAGTTGACAACAAGATGATAGTGGATGCTCTCCAA
GGGTCGCCTTTGAAGCCTAAACAATGCTCGACTTTGGCTAGGCGTATTCT
TCTTCTCCTTCAGCATTTTGAAGAAGTGCAGTTCATTCACATTTTTAGAG
AGGCTAATAAGTGTGCTGATTTTTTTAGCCAAGCTAAATTTGTCCAGTTT
TAA

protein sequence of Psat4g006520.1_Ps_Cameor_v1a

>Psat4g006520.1_Ps_Cameor_v1a ID=Psat4g006520.1_Ps_Cameor_v1a; Name=Psat4g006520.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=700bp
MPTFIGNRIWKAIKVDKNILSIEKGKYARLCIQVDLTKPLLDMFTIKGRH
FKAEYEGLHILYLQYGKYAHTAEGYEAKMVVGTSKDGGTKRNKYKKNKKE
KPFDKHLEIAPRGINKAKDKEQGHEKNKENLERLLEEETLEELVKAAQVY
TSKVVIHNHHNGRFHGQKSNLDQLRQNGIRAQGDKDEQQQKPNSSPNIIT
PNFEGSLFQTDVSQEKNDYMEKVDRLWWHQCIIVYKGFSPPALCFMINQN
LSCLFWNYRGASSKASFRIFNSYIQAKRPDIPLEHRKKELWNELTDSVTS
ISTGWICWGDFNDILHMNKKKGGLPSSLQRCTLFQNRINNYNLIDMGNSS
FFYTWKGPLTHGGMRIYEELDHVLCNSIWRNMYLEAHVRVLHRMEFSDHH
HVFLTLMDKEFRQVPKSFKFECARLFENSFEDMLKPAWNIHHLLLRNSDS
FKTTTLQWKLQNIGSIQRNKIHLLSPLQVEITKWQCLKMAKVGPKVSHLM
FTNDLIVFSSASEAQISVVQFKLAHWKSRQLSFDGRVTLAKVVIEALPTC
TMIKCIILLLTGLRCGLSCAIFYGPRGINNFMTPIILCPRIWFISQGGWL
SGFHKTIGDCNSLVAEFSSVLTGLELAWKRGFKNLIVQVDNKMIVDALQG
SPLKPKQCSTLARRILLLLQHFEEVQFIHIFREANKCADFFSQAKFVQF*

mRNA from alignment at chr4LG4:6953417..6958169+

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Psat4g006520.1_Ps_Cameor_v1a ID=Psat4g006520.1_Ps_Cameor_v1a; Name=Psat4g006520.1; organism=Pisum sativum; type=mRNA; length=4753bp; location=Sequence derived from: chr4LG4:6953417..6958169+ (Pisum sativum
ATGCCAACTTTCATTGGCAATAGGATATGGAAAGCCATCAAAGTTGACAA
GAACATTTTATCTATAGAAAAAGGGAAATATGCTCGGTTATGTATTCAAG
TTGACCTCACTAAACCGTTGTTGGATATGTTTACCATTAAGGGTAGACAC
TTCAAGGCTGAATATGAAGGTCTACATATCCTCTATCTGCAATATGGTAA
GTATGCTCATACTGCTGAAGGATATGAAGCTAAAATGGTGGTTGGAACCA
GCAAAGATGGTGGAACCAAGTGTGTCTTCAATGAAAAAAGCAACACATAG
ATTCAAGATAGAGATCAAGGGCCCTAACAAGGTTCGTGAGCTATTGTTCA
AAAGGTCAAACGTGGCATAAGAGCTAAACAGGCCAATTCTAAAGATGATG
CGAGTGAAAAGAGAAGTAAAGAGCTTCCCAATATTAGAGGCTCTAGATTC
CAAGATCTTCTTAACGATAACCTCAAAGATGTTTCTCTACATCCCAATGA
GACTCCTAAAACTCCTCAATAAGACCATTCTAGAATAAAGGAAATAGTGA
AGATAGTTCTATGTTAAGAAGTAACCAATCTCAAACTCAGGATTCCTTTG
AGAAACCTAAGAATCCATAAGGTCACAACAATTTGGTTCATAGGAGAAAC
AAGTATAAGAAAAATAAAAAAGAGAAACCCTTTGACAAACATCTAGAGAT
CGCTCCTAGAGGCATTAACAAGGCTAAGGACAAGGAGCAAGGACATGAAA
AAAACAAGGAAAATCTTGAGCGTCTCCTAGAGGAAGAGACATTGGAAGAG
TTAGTAAAAGCGGCTCAAGTGTACACTTCCAAAGTTGTGATTCATAATCA
TCATAATGGGAGATTTCATGGGCAAAAATCCAATTTGGATCAACTTAGAC
AGAATGGGATAAGGGCTCAAGGTGATAAAGATGAGCAACAACAAAAACCT
AACTCTTCTCCCAACATTATAACTCCCAACTTTGAAGGAAGTTTATTCCA
AACAGATGTTAGTCAAGAGAAGAATGATTACATGGAAAAGGTTGATAGAC
TATGGTGGCATCAATGCATAATAGTTTATAAGGGCTTTTCTCCTCCTGCA
CTGTGTTTTATGATCAATCAAAATCTTTCCTGTCTATTTTGGAATTATCG
TGGAGCTAGTAGTAAGGCTTCCTTTCGTATTTTTAATTCTTACATTCAAG
CAAAGAGACCTGACATGTTAGTTATCATGGAAACTTGCTCTAATCCTAGT
TATCTTAATTAAGCCTTCTCTCGTTTGGGTTTCACTGGTTTTTCCTTTTC
TCAAGCTAGAGGTTTTGCTGGTGGCATAGCCACAAGATGGAAAACTGAAA
AGCTGCAAGTTCACATTTTAAAGCGTCATTTCTAGTTTATTCATTCTCAA
ATTATCACTGGGGAAGGTAAATTATGGCACCTTTTTGTTGTCTATGTCAG
CCCCTTGGAACACAGAAAGAAAGAGCTTTGGAATGAGTTGACGGATAGTG
TGACTTCTATTTCTACTGGTTGGATTTGTTGGGGGGATTTCAATGATATC
CTTCATATGAACAAGAAAAAAGGCGGGCTTCCGTCTTCCCTTCAAAGATG
TACCCTGTTTCAAAATCGCATTAATAATTATAACCTTATTGACATGGGTA
ACTCTAGCTTTTTTTACACATGGAAAGGTCCACTGACTCATGGTGGAATG
AGGATTTATGAAGAGCTTGATCATGTTTTATGCAATTCCATATGGAGGAA
TATGTACCTTGAAGCCCATGTTAGGGTTCTTCATAGGATGGAGTTCTCTG
ATCATCATCATGTGTTTCTCACCCTCATGGATAAGGAGTTTAGACAGGTG
CCTAAGTCCTTTAAATTTGAGTGTGCTCGGTTGTTTGAAAATTCTTTTGA
GGATATGTTGAAGCCTGCTTGGAATATTCATCATCTTCTCCTTCGCAATT
CGGATTCCTTTAAAACCACTACTTTGCAGTGGAAACTTCAAAATATTGGG
AGTATTCAAAGAAATAAAATTCACCTTCTTAGTCCTCTCCAAGGTATTAA
AAAAGCTATTCAGAATGACAGAGATCATGAAGGGGTCAAAAAGGTTGAAA
AGCATATCAAAGTTAATCTCTCTAAGATTTTTATACCAAGAGGAACTTAT
TTGGTATCAACATGCAAAGATTAATTGGATGGTGAAAGGTGATAGGAACA
CCAACTTCTACCACACTAGGGTTATGCAACGGAGAAGAATAAAAGTGATT
AATTTACTTAAAGATAACAACAACAATTGGATTGAAGATGAAAATAGCAT
TAGACCTTTGTTCAAAGATCATTTCAAAAACCTCTTAACTTCAGATGTCA
TCACTTCTGACTAGTTTCAGACAACCCAACACTTCCCTGCGCTTGATAAA
TGTGTTTACAATTTGAGGTACAAGACTCAGAGATCAAGCAGGCGCTTCTT
GACATGGCGGCTTGGAAGTCTCTTGGAATGGATGACTTTCCTGCAGATTT
CTATTAAAATACTTGGAACCACATTGGTGAGAATCTTCGCTCCTTTATTC
ATCATCTGTGGCACAAGGATATTTCCCTGAAAGACATTAATTTTACAGAC
ATCTGTTTGATTCCTAAACTTGATAATCCCCAGTTGGTTACCTAATTCAG
GCCTATCGTGTTATGAAACACAATCTATAAAGTTTTTTCCAAGGTCATTG
TCAATAGACTCAAGCTCCACATGGATAACATAATCTCCCCTAACCAATCT
GGCTTCATCTCCAATAGAAGCACCCATGATAACATTGTCATTGCACAGGA
AATTCTTCATAGTACTCACAGATCGAAGCGGAAAGTAGGTTCCTTCGCCA
TCAAGTTTGATCTTGTTAAGGCCTGCGATAACATGAGCTGGAACTTCATT
AGCAATGTCCTTACTAAAGTTGGATCCATGTTAACCTGAAAGAGCTCATT
ATGCTTGTTATAACCTCGATCAATTTAAGGGTGCTTTGGAAAGGTGATAT
CAGTGAGTTCTTTAAGGCCAACAAATTAAGGCTTAACACAAGGTGATCCC
ATGTCTCTATATTTTTTGTCCTTTGTATATATAAACTCTCACGCTTGATT
CATGATGCAGTGGAGATCACCAAATGGCAATGCTTAAAGATGGCTAAAGT
GGGTCCTAAGGTGTCCCATCTCATGTTCACAAATGACCTCATTGTGTTTA
GTTCTGCCTCTGAAGCTCAAATAAGTGTGGTTATGGACATTCTTTCCCAA
TTATATAACTCTTTTGGGTAACATATTAATATGGATAAATCCAACATTAT
GTTTTCTGGAAATACCATTATCTTATTTAGAAGGTTCAATTTAAGCTTGC
CCATTGGAAGAGCAGACAACTCTCTTTCGATGGCAGGGTCACTTTGGCTA
AGGTTGTGATTGAGGCCTTGCCGACTTGCACTATGATGTATGTTCTCATT
CCTCAAAAGTGTATAACAAAGATTCATCAGTGTCAGAGATCATTTATATG
AGGTGATTCTCTTGAGAAAATTCATATGCATTCTATCCGTTGGAGCACCA
TTAGCAAAGGGAAGCATCTTGGTGGCCTTGGCCTTCCAATTTATCGATCC
TGAACAAAGCTTGTCTTTCCAAGATAGGATGTCATAACTAATTTTCAGCT
TGTGTCTGATCTCTTGAATGCTGCTGGAAAATGGAACTGGAGTTTAATTA
GTAGGTTTTTTCCTCATCCCATATAGATAAAATCCGTGATATCCCCCTCC
CTCTTTAGCAGGCCCTATTCCTGATAGTTGTATCTGGGGTGGGATAAATT
TCGAGTCATTCTCCATCTCTAGCATGTATGGTTTCTTGAATCAGAACTCG
ATTGATGAGTCTAGTTTTCACTGGGATGCTATCTAGAAGTTGCAGGTCCT
TGAGCGTATTCATAACTTCATATGGAAAGTCCGCTATAATGGTCTTATTA
AAAATGCTTCTCTTAATCATCTTCAGCTGAGGAATAATCTTTGTGATCTT
TGTGGGTTTCATCCAAAGTCTATTCTTCACGCCCTTCGTGATTGGATTTT
TCCCAAAAAGATGTTGGAATCAATTCGTCATCCACATCAACAAGACGCAT
TTTTCTCCTCTTCGTTGCCTGGCTAACTTGAGCTTAATACCACTCAGCAA
ATGCATAATATTGTTGTTGACTGGTCTGCGTTGTGGGCTTTCGTGTGCCA
TCTTCTATGGACCTAGAGGAATAAACAACTTCATGACCCCCATTATATTA
TGCCCTAGAATTTGGTTTATAAGGTCCGTAAGTTTGCTTCTCTTTACCCT
ACCAGCATGAGACTTTCCCTTAAAGTGCAACCTTTGATTGATGGCCCAAA
TTTAGTTTAGTGGTGCCCATCTCCCTTTGAGTAGGGTTTGTTTACTAGCG
GATTACTTGCTAAGTGTGAGGGCTTTTTTTGTGACAGTCAAGGAGGATGG
CTTAGTGGCTTTCATAAGACTATTGGTGATTGCAATAGTCTTGTTGCAGA
GTTCTCGAGTGTCCTTACGGGTTTGGAGCTTGCTTGGAAGAGAGGTTTCA
AGAACCTTATTGTTCAAGTTGACAACAAGATGATAGTGGATGCTCTCCAA
GGGTCGCCTTTGAAGCCTAAACAATGCTCGACTTTGGCTAGGCGTATTCT
TCTTCTCCTTCAGCATTTTGAAGAAGTGCAGTTCATTCACATTTTTAGAG
AGGCTAATAAGTGTGCTGATTTTTTTAGCCAAGCTAAATTTGTCCAGTTT
TAA

Coding sequence (CDS) from alignment at chr4LG4:6953417..6958169+

>Psat4g006520.1_Ps_Cameor_v1a ID=Psat4g006520.1_Ps_Cameor_v1a; Name=Psat4g006520.1; organism=Pisum sativum; type=CDS; length=4200bp; location=Sequence derived from: chr4LG4:6953417..6958169+ (Pisum sativum
ATGCCAACTTTCATTGGCAATAGGATATGGAAAGCCATCAAAGTTGACAA
GAACATTTTATCTATAGAAAAAGGGAAATATGCTCGGTTATGTATTCAAG
TTGACCTCACTAAACCGTTGTTGGATATGTTTACCATTAAGGGTAGACAC
TTCAAGGCTGAATATGAAGGTCTACATATCCTCTATCTGCAATATGGTAA
GTATGCTCATACTGCTGAAGGATATGAAGCTAAAATGGTGGTTGGAACCA
GCAAAGATGGTGGAACCAAATGCCAACTTTCATTGGCAATAGGATATGGA
AAGCCATCAAAGTTGACAAGAACATTTTATCTATAGAAAAAGGGAAATAT
GCTCGGTTATGTATTCAAGTTGACCTCACTAAACCGTTGTTGGATATGTT
TACCATTAAGGGTAGACACTTCAAGGCTGAATATGAAGGTCTACATATCC
TCTATCTGCAATATGGTAAGTATGCTCATACTGCTGAAGGATATGAAGCT
AAAATGGTGGTTGGAACCAGCAAAGATGGTGGAACCAAGAGAAACAAGTA
TAAGAAAAATAAAAAAGAGAAACCCTTTGACAAACATCTAGAGATCGCTC
CTAGAGGCATTAACAAGGCTAAGGACAAGGAGCAAGGACATGAAAAAAAC
AAGGAAAATCTTGAGCGTCTCCTAGAGGAAGAGACATTGGAAGAGTTAGT
AAAAGCGGCTCAAGTGTACACTTCCAAAGTTGTGATTCATAATCATCATA
ATGGGAGATTTCATGGGCAAAAATCCAATTTGGATCAACTTAGACAGAAT
GGGATAAGGGCTCAAGGTGATAAAGATGAGCAACAACAAAAACCTAACTC
TTCTCCCAACATTATAACTCCCAACTTTGAAGGAAGTTTATTCCAAACAG
ATGTTAGTCAAGAGAAGAATGATTACATGGAAAAGGTTGATAGACTATGG
TGGCATCAATGCATAATAGTTTATAAGGGCTTTTCTCCTCCTGCACTGTG
TTTTATGATCAATCAAAATCTTTCCTGTCTATTTTGGAATTATCGTGGAG
CTAGTAGTAAGGCTTCCTTTCGTATTTTTAATTCTTACATTCAAGCAAAG
AGACCTGACATGAGAAACAAGTATAAGAAAAATAAAAAAGAGAAACCCTT
TGACAAACATCTAGAGATCGCTCCTAGAGGCATTAACAAGGCTAAGGACA
AGGAGCAAGGACATGAAAAAAACAAGGAAAATCTTGAGCGTCTCCTAGAG
GAAGAGACATTGGAAGAGTTAGTAAAAGCGGCTCAAGTGTACACTTCCAA
AGTTGTGATTCATAATCATCATAATGGGAGATTTCATGGGCAAAAATCCA
ATTTGGATCAACTTAGACAGAATGGGATAAGGGCTCAAGGTGATAAAGAT
GAGCAACAACAAAAACCTAACTCTTCTCCCAACATTATAACTCCCAACTT
TGAAGGAAGTTTATTCCAAACAGATGTTAGTCAAGAGAAGAATGATTACA
TGGAAAAGGTTGATAGACTATGGTGGCATCAATGCATAATAGTTTATAAG
GGCTTTTCTCCTCCTGCACTGTGTTTTATGATCAATCAAAATCTTTCCTG
TCTATTTTGGAATTATCGTGGAGCTAGTAGTAAGGCTTCCTTTCGTATTT
TTAATTCTTACATTCAAGCAAAGAGACCTGACATCCCCTTGGAACACAGA
AAGAAAGAGCTTTGGAATGAGTTGACGGATAGTGTGACTTCTATTTCTAC
TGGTTGGATTTGTTGGGGGGATTTCAATGATATCCTTCATATGAACAAGA
AAAAAGGCGGGCTTCCGTCTTCCCTTCAAAGATGTACCCTGTTTCAAAAT
CGCATTAATAATTATAACCTTATTGACATGGGTAACTCTAGCTTTTTTTA
CACATGGAAAGGTCCACTGACTCATGGTGGAATGAGGATTTATGAAGAGC
TTGATCATGTTTTATGCAATTCCATATGGAGGAATATGTACCTTGAAGCC
CATGTTAGGGTTCTTCATAGGATGGAGTTCTCTGATCATCATCATGTGTT
TCTCACCCTCATGGATAAGGAGTTTAGACAGGTGCCTAAGTCCTTTAAAT
TTGAGTGTGCTCGGTTGTTTGAAAATTCTTTTGAGGATATGTTGAAGCCT
GCTTGGAATATTCATCATCTTCTCCTTCGCAATTCGGATTCCTTTAAAAC
CACTACTTTGCAGTGGAAACTTCAAAATATTGGGAGTATTCAAAGAAATA
AAATTCACCTTCTTAGTCCTCTCCAAGCCCCTTGGAACACAGAAAGAAAG
AGCTTTGGAATGAGTTGACGGATAGTGTGACTTCTATTTCTACTGGTTGG
ATTTGTTGGGGGGATTTCAATGATATCCTTCATATGAACAAGAAAAAAGG
CGGGCTTCCGTCTTCCCTTCAAAGATGTACCCTGTTTCAAAATCGCATTA
ATAATTATAACCTTATTGACATGGGTAACTCTAGCTTTTTTTACACATGG
AAAGGTCCACTGACTCATGGTGGAATGAGGATTTATGAAGAGCTTGATCA
TGTTTTATGCAATTCCATATGGAGGAATATGTACCTTGAAGCCCATGTTA
GGGTTCTTCATAGGATGGAGTTCTCTGATCATCATCATGTGTTTCTCACC
CTCATGGATAAGGAGTTTAGACAGGTGCCTAAGTCCTTTAAATTTGAGTG
TGCTCGGTTGTTTGAAAATTCTTTTGAGGATATGTTGAAGCCTGCTTGGA
ATATTCATCATCTTCTCCTTCGCAATTCGGATTCCTTTAAAACCACTACT
TTGCAGTGGAAACTTCAAAATATTGGGAGTATTCAAAGAAATAAAATTCA
CCTTCTTAGTCCTCTCCAAGTGGAGATCACCAAATGGCAATGCTTAAAGA
TGGCTAAAGTGGGTCCTAAGGTGTCCCATCTCATGTTCACAAATGACCTC
ATTGTGTTTAGTTCTGCCTCTGAAGCTCAAATAAGTGTGTGGAGATCACC
AAATGGCAATGCTTAAAGATGGCTAAAGTGGGTCCTAAGGTGTCCCATCT
CATGTTCACAAATGACCTCATTGTGTTTAGTTCTGCCTCTGAAGCTCAAA
TAAGTGTGGTTCAATTTAAGCTTGCCCATTGGAAGAGCAGACAACTCTCT
TTCGATGGCAGGGTCACTTTGGCTAAGGTTGTGATTGAGGCCTTGCCGAC
TTGCACTATGATGTTCAATTTAAGCTTGCCCATTGGAAGAGCAGACAACT
CTCTTTCGATGGCAGGGTCACTTTGGCTAAGGTTGTGATTGAGGCCTTGC
CGACTTGCACTATGATCAAATGCATAATATTGTTGTTGACTGGTCTGCGT
TGTGGGCTTTCGTGTGCCATCTTCTATGGACCTAGAGGAATAAACAACTT
CATGACCCCCATTATATTATGCCCTAGAATTTGGTTTATAAGCAAATGCA
TAATATTGTTGTTGACTGGTCTGCGTTGTGGGCTTTCGTGTGCCATCTTC
TATGGACCTAGAGGAATAAACAACTTCATGACCCCCATTATATTATGCCC
TAGAATTTGGTTTATAAGTCAAGGAGGATGGCTTAGTGGCTTTCATAAGA
CTATTGGTGATTGCAATAGTCTTGTTGCAGAGTTCTCGAGTGTCCTTACG
GGTTTGGAGCTTGCTTGGAAGAGAGGTTTCAAGAACCTTATTGTTCAAGT
TGACAACAAGATGATAGTGGATGCTCTCCAAGGGTCGCCTTTGAAGCCTA
AACAATGCTCGACTTTGGCTAGGCGTATTCTTCTTCTCCTTCAGCATTTT
GAAGAAGTGCAGTTCATTCACATTTTTAGAGAGGCTAATAAGTGTGCTGA
TTTTTTTAGCCAAGCTAAATTTGTCCAGTTTTAATCAAGGAGGATGGCTT
AGTGGCTTTCATAAGACTATTGGTGATTGCAATAGTCTTGTTGCAGAGTT
CTCGAGTGTCCTTACGGGTTTGGAGCTTGCTTGGAAGAGAGGTTTCAAGA
ACCTTATTGTTCAAGTTGACAACAAGATGATAGTGGATGCTCTCCAAGGG
TCGCCTTTGAAGCCTAAACAATGCTCGACTTTGGCTAGGCGTATTCTTCT
TCTCCTTCAGCATTTTGAAGAAGTGCAGTTCATTCACATTTTTAGAGAGG
CTAATAAGTGTGCTGATTTTTTTAGCCAAGCTAAATTTGTCCAGTTTTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR036691	Endo/exonu/phosph_ase_sf
IPR002156	RNaseH_domain
IPR012337	RNaseH-like_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0004523	RNA-DNA hybrid ribonuclease activity

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