Psat5g021640.1

Transcript Overview
NamePsat5g021640.1
Unique NamePsat5g021640.1_Ps_Cameor_v1a
TypemRNA
OrganismPisum sativum (pea)
Sequence length1791
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr5LG3supercontigchr5LG3:40785390..40787180 -Pisum sativum Cameor genome v1an/a
chr5LG3supercontigchr5LG3:40785390..40787180 -Pisum sativum Cameor genome v1an/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan: P. sativum Cameor genome v1a2019-09-12
BLAST: P. sativum Cameor genome v1a vs. Swissprot2019-09-12
Pisum sativum Cameor genome v1a2019-09-06
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Psat5g021640Psat5g021640_Ps_Cameor_v1aPisum sativumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Psat5g021640.1Psat5g021640.1_Ps_Cameor_v1a-proteinPisum sativumpolypeptide
Psat5g021640.1_Ps_Cameor_v1aPsat5g021640.1_Ps_Cameor_v1aPisum sativumpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat5g021640.1.five_prime_utr1Psat5g021640.1.five_prime_utr1_Ps_Cameor_v1aPisum sativumfive_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat5g021640.1.exon1Psat5g021640.1.exon1_Ps_Cameor_v1aPisum sativumexon
Psat5g021640.1.exon2Psat5g021640.1.exon2_Ps_Cameor_v1aPisum sativumexon
Psat5g021640.1.exon3Psat5g021640.1.exon3_Ps_Cameor_v1aPisum sativumexon
Psat5g021640.1.exon4Psat5g021640.1.exon4_Ps_Cameor_v1aPisum sativumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat5g021640.1.cds1Psat5g021640.1.cds1_Ps_Cameor_v1aPisum sativumCDS
Psat5g021640.1.cds2Psat5g021640.1.cds2_Ps_Cameor_v1aPisum sativumCDS
Psat5g021640.1.cds3Psat5g021640.1.cds3_Ps_Cameor_v1aPisum sativumCDS
Psat5g021640.1.cds4Psat5g021640.1.cds4_Ps_Cameor_v1aPisum sativumCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat5g021640.1.three_prime_utr1Psat5g021640.1.three_prime_utr1_Ps_Cameor_v1aPisum sativumthree_prime_UTR


Homology
The following BLAST results are available for this feature:
BLAST of Psat5g021640.1 vs.
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..194

Sequences
The following sequences are available for this feature:

mRNA sequence

>Psat5g021640.1_Ps_Cameor_v1a ID=Psat5g021640.1_Ps_Cameor_v1a; Name=Psat5g021640.1; organism=Pisum sativum; type=mRNA; length=1791bp
CTCCAGTGAAGATCAATCCAATTTCTCAAATTGCCCCTTCCAAGCCTAAG
ATTACTGATTCTTCTTCCTCTCTCAATAAGAATCTCCCCAGCTCAAATAA
GATGAAATCTGTCACCACTCTCACTAAATCTGAGGTATCATCAATTCAAT
TTTGGGATTCAATTGTTATAATTAATATTTAATTATACTAATTAGGGTTT
CTTAAATTATATATTTGTATCCTTTCTTGATAGTTAGGGTTCATAATTCT
GTGAATTTTATGCTTTCTTGAGGGTTAGGGTTCATAATCATGCAACTGAA
TTTTATGTTAGCAGATGTTAGATATAGTTAGATTTTGTTAATGATGGTGA
TTATTTGGTTGCTATTAGTTGAGAATTAGTTAAGATGACAATTCTGTTTT
GTATAAATTTGATAGGTTAAATCAAAGCTGACAACAATGTTGTCGTCATC
ATCGAAAACAACGACGACTACGAAGACGACGAAGAGGAAAACTACTACCA
CCAAAGTGAGAGAGAGGAAAGTCTATAATTTGCCTGGCCAGAAACACGAT
CCACCTGAAGAGGTTCGTAATTTTTCACAATTTATTCCGGAAATTTACAA
TTCGTTGTATGTATCGAGAGATCGAATCGGACTAATACAAGATGTTTGTT
CATAATCGTACCTTGTGTTTGCAGAAAGAACCCTTGAGGATTTTCTATGA
GTCGTTGTCGAAACAGATACCTACAAGTGAAATGGCGGAATTTTGGTGAG
TTTTCTTCCAATTTTGGGGAAATTTTGGTGCAATGAATGTTCATAATTTA
GGATCTAGCAATGGTTGATATCAGATTTTGTTCGAAATTGAAAATCGATA
AAAAAAAAACTGTCGAAAATTGATATCAGATTATGGCGTTATTTATGGGT
CTAGTTAGTAGAGTTGAGATTCTCAATGTTTCTTATCCAATGCAGGTTAA
TGGAACATGGACTATTGTCTCTTGAAAGAGCTAAGAAAGCATTTGAGAAG
AAGCAGAGAAAGCAAAAGGAGCTTCGAACAGGGACTCCGGCTAAGTCGTC
GTCAAAGCCGCCGACAAAAACCGGAACTTCACAGAAGCCGCAACCGAGAC
CAAATAATACTGGAACTTCACAGAAGCCGCAACCGAGACCAAATAATACT
GGATCTTCACAGAAGCCGCAACAGAAATCAAATAATGGCGAAATTAAAGC
AAAGAGAAAAATCGAGAGTGACAGTGATGATGACGACGACGACGATTTCA
TTTTGAGTCATAAAAGAAGAAGAGTGTAAGAAGAAAAACCTCACAAATTT
TATTTAATAAAGGTTATAAAAAGGAAAAGAAAAGATTTGTTGTAAGGTAA
CTTGAACTGTAAGATTAAAATATTCTTCATGTGTCAAACTTTACTGATTC
AACAAGGGACTTGCACTGTGTTGTTGTATGTGTCTTTTGCAAGCAACATT
ATTAATGAAGATGGAGAGTGCTTTTACTCCATTACTTCTTCCCCTTGAGA
TTGATTTTGGTCGAATATGATTCACAATACATAGTTATATGTTTGGTACT
ATAATTAAAGGATAAAATTAGTTACTCATAGTAAGTTCGTCCAGCTGTGA
TTGATGTTGGACTTTAGTAGGAAGGATCACAGTTCGATCTGAATCAGATA
TCTGTGGTGTAAAAAAAATAAAATTGTAAAACTACTTTTCCAAGATGTGT
TTATTAGCATTCCCTTGATCATGGTATAATTTCTTTAGTTAGTATAATAT
CTTTAGTAATAAGCTTTATAAAGAGTAGGGATCAGCTCCCG
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protein sequence of Psat5g021640.1_Ps_Cameor_v1a

>Psat5g021640.1_Ps_Cameor_v1a ID=Psat5g021640.1_Ps_Cameor_v1a; Name=Psat5g021640.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=195bp
MKSVTTLTKSEVKSKLTTMLSSSSKTTTTTKTTKRKTTTTKVRERKVYNL
PGQKHDPPEEKEPLRIFYESLSKQIPTSEMAEFWLMEHGLLSLERAKKAF
EKKQRKQKELRTGTPAKSSSKPPTKTGTSQKPQPRPNNTGTSQKPQPRPN
NTGSSQKPQQKSNNGEIKAKRKIESDSDDDDDDDFILSHKRRRV*
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mRNA from alignment at chr5LG3:40785390..40787180-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Psat5g021640.1_Ps_Cameor_v1a ID=Psat5g021640.1_Ps_Cameor_v1a; Name=Psat5g021640.1; organism=Pisum sativum; type=mRNA; length=1791bp; location=Sequence derived from: chr5LG3:40785390..40787180- (Pisum sativum
CTCCAGTGAAGATCAATCCAATTTCTCAAATTGCCCCTTCCAAGCCTAAG
ATTACTGATTCTTCTTCCTCTCTCAATAAGAATCTCCCCAGCTCAAATAA
GATGAAATCTGTCACCACTCTCACTAAATCTGAGGTATCATCAATTCAAT
TTTGGGATTCAATTGTTATAATTAATATTTAATTATACTAATTAGGGTTT
CTTAAATTATATATTTGTATCCTTTCTTGATAGTTAGGGTTCATAATTCT
GTGAATTTTATGCTTTCTTGAGGGTTAGGGTTCATAATCATGCAACTGAA
TTTTATGTTAGCAGATGTTAGATATAGTTAGATTTTGTTAATGATGGTGA
TTATTTGGTTGCTATTAGTTGAGAATTAGTTAAGATGACAATTCTGTTTT
GTATAAATTTGATAGGTTAAATCAAAGCTGACAACAATGTTGTCGTCATC
ATCGAAAACAACGACGACTACGAAGACGACGAAGAGGAAAACTACTACCA
CCAAAGTGAGAGAGAGGAAAGTCTATAATTTGCCTGGCCAGAAACACGAT
CCACCTGAAGAGGTTCGTAATTTTTCACAATTTATTCCGGAAATTTACAA
TTCGTTGTATGTATCGAGAGATCGAATCGGACTAATACAAGATGTTTGTT
CATAATCGTACCTTGTGTTTGCAGAAAGAACCCTTGAGGATTTTCTATGA
GTCGTTGTCGAAACAGATACCTACAAGTGAAATGGCGGAATTTTGGTGAG
TTTTCTTCCAATTTTGGGGAAATTTTGGTGCAATGAATGTTCATAATTTA
GGATCTAGCAATGGTTGATATCAGATTTTGTTCGAAATTGAAAATCGATA
AAAAAAAAACTGTCGAAAATTGATATCAGATTATGGCGTTATTTATGGGT
CTAGTTAGTAGAGTTGAGATTCTCAATGTTTCTTATCCAATGCAGGTTAA
TGGAACATGGACTATTGTCTCTTGAAAGAGCTAAGAAAGCATTTGAGAAG
AAGCAGAGAAAGCAAAAGGAGCTTCGAACAGGGACTCCGGCTAAGTCGTC
GTCAAAGCCGCCGACAAAAACCGGAACTTCACAGAAGCCGCAACCGAGAC
CAAATAATACTGGAACTTCACAGAAGCCGCAACCGAGACCAAATAATACT
GGATCTTCACAGAAGCCGCAACAGAAATCAAATAATGGCGAAATTAAAGC
AAAGAGAAAAATCGAGAGTGACAGTGATGATGACGACGACGACGATTTCA
TTTTGAGTCATAAAAGAAGAAGAGTGTAAGAAGAAAAACCTCACAAATTT
TATTTAATAAAGGTTATAAAAAGGAAAAGAAAAGATTTGTTGTAAGGTAA
CTTGAACTGTAAGATTAAAATATTCTTCATGTGTCAAACTTTACTGATTC
AACAAGGGACTTGCACTGTGTTGTTGTATGTGTCTTTTGCAAGCAACATT
ATTAATGAAGATGGAGAGTGCTTTTACTCCATTACTTCTTCCCCTTGAGA
TTGATTTTGGTCGAATATGATTCACAATACATAGTTATATGTTTGGTACT
ATAATTAAAGGATAAAATTAGTTACTCATAGTAAGTTCGTCCAGCTGTGA
TTGATGTTGGACTTTAGTAGGAAGGATCACAGTTCGATCTGAATCAGATA
TCTGTGGTGTAAAAAAAATAAAATTGTAAAACTACTTTTCCAAGATGTGT
TTATTAGCATTCCCTTGATCATGGTATAATTTCTTTAGTTAGTATAATAT
CTTTAGTAATAAGCTTTATAAAGAGTAGGGATCAGCTCCCG
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Coding sequence (CDS) from alignment at chr5LG3:40785390..40787180-

>Psat5g021640.1_Ps_Cameor_v1a ID=Psat5g021640.1_Ps_Cameor_v1a; Name=Psat5g021640.1; organism=Pisum sativum; type=CDS; length=1170bp; location=Sequence derived from: chr5LG3:40785390..40787180- (Pisum sativum
ATGAAATCTGTCACCACTCTCACTAAATCTGAGATGAAATCTGTCACCAC
TCTCACTAAATCTGAGGTTAAATCAAAGCTGACAACAATGTTGTCGTCAT
CATCGAAAACAACGACGACTACGAAGACGACGAAGAGGAAAACTACTACC
ACCAAAGTGAGAGAGAGGAAAGTCTATAATTTGCCTGGCCAGAAACACGA
TCCACCTGAAGAGGTTAAATCAAAGCTGACAACAATGTTGTCGTCATCAT
CGAAAACAACGACGACTACGAAGACGACGAAGAGGAAAACTACTACCACC
AAAGTGAGAGAGAGGAAAGTCTATAATTTGCCTGGCCAGAAACACGATCC
ACCTGAAGAGAAAGAACCCTTGAGGATTTTCTATGAGTCGTTGTCGAAAC
AGATACCTACAAGTGAAATGGCGGAATTTTGAAAGAACCCTTGAGGATTT
TCTATGAGTCGTTGTCGAAACAGATACCTACAAGTGAAATGGCGGAATTT
TGGTTAATGGAACATGGACTATTGTCTCTTGAAAGAGCTAAGAAAGCATT
TGAGAAGAAGCAGAGAAAGCAAAAGGAGCTTCGAACAGGGACTCCGGCTA
AGTCGTCGTCAAAGCCGCCGACAAAAACCGGAACTTCACAGAAGCCGCAA
CCGAGACCAAATAATACTGGAACTTCACAGAAGCCGCAACCGAGACCAAA
TAATACTGGATCTTCACAGAAGCCGCAACAGAAATCAAATAATGGCGAAA
TTAAAGCAAAGAGAAAAATCGAGAGTGACAGTGATGATGACGACGACGAC
GATTTCATTTTGAGTCATAAAAGAAGAAGAGTGTAAGTTAATGGAACATG
GACTATTGTCTCTTGAAAGAGCTAAGAAAGCATTTGAGAAGAAGCAGAGA
AAGCAAAAGGAGCTTCGAACAGGGACTCCGGCTAAGTCGTCGTCAAAGCC
GCCGACAAAAACCGGAACTTCACAGAAGCCGCAACCGAGACCAAATAATA
CTGGAACTTCACAGAAGCCGCAACCGAGACCAAATAATACTGGATCTTCA
CAGAAGCCGCAACAGAAATCAAATAATGGCGAAATTAAAGCAAAGAGAAA
AATCGAGAGTGACAGTGATGATGACGACGACGACGATTTCATTTTGAGTC
ATAAAAGAAGAAGAGTGTAA
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