VigunL057500.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of VigunL057500.1 vs. DB:Swiss
Match: RDR6_ARATH (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1) HSP 1 Score: 1540.4 bits (3987), Expect = 0.000e+0 Identity = 749/1124 (66.64%), Postives = 902/1124 (80.25%), Query Frame = 1 Query: 1 MDVEASDNDSVVTQISIGGFGSEVKASDLVNYLEDKIGLVYRCRLKTSWTPPESYPEFNITDTAKITRTDDYMKVKPHAFVHFASSESVTAALNASGSCDMFLKNESLKVSCGPENPYFLNKRRRTKTPFKMSDVIVEIGTLVSPWEFSVAWKGPDKGVKFLVDPFDGMCRFCFTRDTAFSFKGIEKKAVIKCDFQVGFLVRDINEIRRYNDTSYLVVLLHLASSPWVWYRTAEDDIEDLVPYXXXXXXXPWIRTTDFTPSGAIGRCNFYKISIPPRHGAKLMKAMLYLKAQRVQTQEL--PPKQTTLRALNEPDFGRPMSDAFFYVDYQKDISFDVMFLVNAIVHKGIFNQHRLSDGFFELLRNQSKELNVAALKHLCSYKRPVFDATKRLKLVQEWLHRNPKLYQISKKLDDVVEVRRLVITPSKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNALNYYVAPIVKEITSNSFPQKTKIYNRVKTILEKGFSFCGRKYSFLAFSSNQLRDRSAWFFAE-GKIRCDEIRSWMGKFNQKNVAKCAARMGQCFSSTYATVEVVANEVNFSLPDVERNNYVFSDGIGIISPDLAREVAEKLKLD--NIPSAYQIRYAGFKGVVASWPAKGDGIRLSLRPSMDKFQSSHTILEICAWTRFQPGFLNRQIITLLSALGVPDDIFWQMQEAMLWKLNQMLVDADIAFDVLTKSCAEHGNAAAIMLSCGFSPLTEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDECGVLEQGQCFVQVSTPSLENCFSKHGSRFSETK-NLQVVKGFVVIAKNPCLHPGDVRVLEAVDAPDLHHLCDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKRSWIPMEYAAVESKLLTRQVMTRDIIEFFVRNMVNENLGAICNAHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKVVTMPHHLKPKLYPDFMGKENHQSYRSKKILGRLYRRIKDAYDEDIDAPYLNFLT-GDIPYDKDLEVPGSADFLVESWEQKCAYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRHIFERLSSDVGDLSEEEK 3351 M E + SVVTQ+SIGGFG A L +YLED++G+V+RCRLKTSWTPP SYP F I DT+ I D+Y KV+PHAFVHFA ES A++A+G C++ L + LKVS GP+NPY LN+RRRT P+K++ + +EIGTLVS +F V+W+ +GV FLVDPFD C+FCF + TAFSFK AVI CD+++ LVRDI +R+Y V++L LASSP VWYRTA+DDI D VP DLLDDDDPWIRTTDFT GAIGRC+ Y++ I PR+ KL A+ Y + +RVQ + + PP R NEP FG P+SD FF + +++ ISF++MFLVN+++H+G+FNQ +L++ FF+LLRNQ K++N+A+LKHLC+YKRPVFDA KRLKLVQEW+ +NPKL ++ +D+ E+RRLVITP++AYC+PPEVELSNRVLR+++ V++ FLRVTFMDE MQTIN N L+Y+VAPIVK++TS+SF QKT ++ RVK+IL GF CGRKYSFLAFS+NQLRDRSAWFFAE GK R +I++WMGKF KNVAKCAARMG CFSSTYATV+V+ +EV+ +PD+ERN YVFSDGIG I+PDLA EV EKLKLD P AYQIRYAGFKGVVA WP+K DGIRL+LR SM KF S HTILEIC+WTRFQPGFLNRQIITLLS LGVPD+IFW MQE+ML+KLN++L D D+AF+VLT SCAE GN AAIMLS GF P TEPHLRGML+S R AQLWGLREKSRIFV+SGRWLMG LDE G+LE GQCF+QVS PS+ENCFSKHGSRF ETK +L+VVKG+V IAKNPCLHPGDVR+LEAVD P LHH+ DCL+FPQKGDRPHTNEASGSDLDGDLYFV WD LIPP+++S+ M Y A E K L R V +DII+FF RN+ NE LG ICNAHVVHAD S+YGA+DE+C+ LAELAATAVDFPKTGK+V+MP HLKPKLYPDFMGKE++Q+Y+S KILGRLYRR+K+ YDED +A IPYD LE+PG D + E+W KC YDGQL GLLGQYKV++EEE+VTG IWSMPKY S+KQGELKERLKHSY++LKKEFR +FE D +LSEEEK Sbjct: 1 MGSEGNMKKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEIADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSLNQRRRTTVPYKLAGITLEIGTLVSRDDFFVSWRA--EGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLELLVRDIQTVRQYKTLHGFVLILQLASSPRVWYRTADDDIYDTVPGDLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVRWPP-----RIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQPKDVNIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKFKDKNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNGYVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEK 1117
BLAST of VigunL057500.1 vs. DB:Swiss
Match: SHL2_ORYSJ (Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHL2 PE=2 SV=1) HSP 1 Score: 1316.6 bits (3406), Expect = 0.000e+0 Identity = 664/1126 (58.97%), Postives = 829/1126 (73.62%), Query Frame = 1 Query: 13 ASDNDSVVTQISIGGFGSEVKASDLVNYLEDKIGLVYRCRLKTSWTPPESYPEFNITDTAKITRTDD----YMKVKPHAFVHFASSESVTAALNASGSCDMFLKNESLKVSCGPENPYFLNKRRRTKTPFKMSDVIVEIGTLVSPWEFSVAWKGPDKGVKFLVDPFDGMCRFCFTRDTAFSFKGIEKKAVIKCDFQVGFLVRDINEIRRYN-DTSYLVVLLHLASSPWVWYRTAEDDIEDLVPYXXXXXXXPWIRTTDFTPSGAIGRCNFYKISIPPRHGAKLMKAMLYLKAQRVQTQEL-----PPKQTTLRALNEPDFGRPMSDAFFYVDYQKDISFDVMFLVNAIVHKGIFNQHRLSDGFFELLRNQSKELNVAALKHLCSYKRPVFDATKRLKLVQEWLHRNPKLYQISKKLDDVVEVRRLVITPSKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNALNYYVAPIVKEITSNSFPQKTKIYNRVKTILEKGFSFCGRKYSFLAFSSNQLRDRSAWFFAEG-KIRCDEIRSWMGKFNQKNVAKCAARMGQCFSSTYATVEVVANEVNFSLPDVERNNYVFSDGIGIISPDLAREVAEKLKL-DNIPSAYQIRYAGFKGVVASWPAKGDGIRLSLRPSMDKFQSSHTILEICAWTRFQPGFLNRQIITLLSALGVPDDIFWQMQEAMLWKLNQMLVDADIAFDVLTKSCAEHGNAAAIMLSCGFSPLTEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDECGVLEQGQCFVQVSTPSLENCFSKHGSRFSET-KNLQVVKGFVVIAKNPCLHPGDVRVLEAVDAPDLHHLCDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKRSWIPMEYAAVESKLLTRQVMTRDIIEFFVRNMVNENLGAICNAHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKVVTMPHHLKPKLYPDFMGKENHQSYRSKKILGRLYRRIKDAYDEDIDAPYLNFLTGDIPYDKDLEVPGSADFLVESWEQKCAYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRHIFERLSSDVGDLSEEEK 3351 A+ D V TQ+S+GGF + V A DL ++LE ++GLV+RCR+KTSWTPP+SYP+F + Y +V PHAFVHFA E A + +G + L+ + L+V+ P++ +++R PF+ DV +E+G L SP F AW+GPD G+ VDPFDG CR FTRDTAF+F G + A I+CD ++ F VRD+ E+R Y D S L+ L V YRTA+DD + VP+DLLDDDDPWIRTTD TPSGAIGRC Y+IS R K+ +A+ Y++ +RV + P + T+R +E +FG PM D FF + + + + F ++F+VNA+VHKGI NQH+L+ FF LL + +NVAAL+ K PVFDA RLK + RNPKL SK DD EVRRLVITP++AYC+PPEVE SNRVLR + EV+D FLRVTFMDEGMQ +N N LN + APIVK++ SN F QKT +Y RV+ +L +GF CGRKYSFLAFSSNQLRD+SAWFFAE K + IR WMG+F KNVAK AARMGQCFSSTYATV + +EV+ S DV N Y+FSDGIG I+PDLA EVAE+L+L DN PSAYQIR+AGFKGV+A W GDG RL LRPSM KF+S+H +LE+ +WT+FQPGFLNRQII LLS+L VPD IFWQMQE ML LN +L D D+AF+VLT SCA+ GN AA+MLS GF P TEPHL+ ML + R+AQL L EK+RIFV GRWLMG LDE GVLEQGQCF++ + PSL + F KHGSRFS T KN +V+ G VVIAKNPCLHPGDVR+LEAVD P+LHHL DCLVFPQKG+RPH NEASGSDLDGDLYFVTWD+ LIPP K+SW PM+Y+ E+K L RQV DII+FF++NM++ENLG ICNAHVVHAD S+YGA+DEKCIHLAELAATAVDFPKTGK+ MP HLKPK+YPDFMGKE+ QSY+S+KILGRLYR I++A + D+ + + D+PYD DLEVPG++DFL +W+ KC+YD QLS LL QY+V+ E E+VTG I + K +S+KQG++K+RLK +YSAL+KEF+ FE ++SD ++ ++EK Sbjct: 22 AAAGDLVTTQVSLGGFDAGVAAGDLADFLEHEVGLVWRCRVKTSWTPPDSYPDFALPTAPASASAAAAPPRYDRVPPHAFVHFARPEGARRAADLAGETRLILRGKPLRVASAPDSSLRVSRRSSI-APFRFPDVRLEVGALPSPGAFLAAWRGPDAGLDLSVDPFDGCCRLVFTRDTAFTFPGFREVAAIRCDVKLEFPVRDVLEVRLYRLDCSLLLRLAAAPL---VHYRTADDDFHEPVPFDLLDDDDPWIRTTDITPSGAIGRCGVYRISFSARFWPKMDRALDYMRERRVAIVDCGGGWGPRRGLTVR--DELEFGEPMQDVFFCLQHAEGLKFPLLFMVNALVHKGIINQHQLTPEFFSLLGRSEENVNVAALRDFWGDKFPVFDACGRLKKALNRVARNPKLL-CSKVGDDHAEVRRLVITPTRAYCLPPEVERSNRVLRHYHEVADRFLRVTFMDEGMQVLNNNVLNSFTAPIVKDLMSNFFQQKTTVYKRVRMLLTEGFHMCGRKYSFLAFSSNQLRDKSAWFFAEDRKTTVEAIRKWMGRFTSKNVAKHAARMGQCFSSTYATVTMRPDEVDESFDDVVHNEYIFSDGIGKITPDLALEVAERLQLTDNPPSAYQIRFAGFKGVIAVWQGHGDGTRLFLRPSMRKFESNHLVLEVVSWTKFQPGFLNRQIIILLSSLNVPDSIFWQMQETMLSNLNNILSDRDVAFEVLTTSCADDGNTAALMLSAGFEPRTEPHLKAMLLAIRSAQLQDLLEKARIFVPKGRWLMGCLDELGVLEQGQCFIRATVPSLNSYFVKHGSRFSSTDKNTEVILGTVVIAKNPCLHPGDVRILEAVDVPELHHLVDCLVFPQKGERPHANEASGSDLDGDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQLPRQVSQHDIIDFFLKNMISENLGRICNAHVVHADLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILGRLYRSIQEASNGDVVSQEV-CTPNDLPYDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHITFLVKNSSKKQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEK 1139
BLAST of VigunL057500.1 vs. DB:Swiss
Match: RDR1_ARATH (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1) HSP 1 Score: 561.607 bits (1446), Expect = 1.911e-180 Identity = 337/871 (38.69%), Postives = 490/871 (56.26%), Query Frame = 1 Query: 754 WIRTTDFTPSGAIGRCNFYKISIPPRHGAKLMKAMLYLKAQRVQTQEL-------PPKQTTLRALNEPDFGRPMSDAFFYVDYQKDISFDVMFLVNAIVHKGIFNQHRLSDGFFELLRNQSK---ELNVAALKHLCSYKRPVFDATKRLK-LVQEWLHRNPKLYQISKKLDD-VVEVRRLVITPSKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNALNYYVAPIVKEITSNSFPQKTKIYNRVKTILEKGFSFCGRKYSFLAFSSNQLRDRSAWFFAE-GKIRCDEIRSWMGKFNQ-KNVAKCAARMGQCFSSTYATVEVVANEVNFSLPDVE----RNNYVFSDGIGIISPDLAREVAEKLKLDNI-PSAYQIRYAGFKGVVASWPAKGDGIRLSLRPSMDKFQSSHTILEICAWTRFQPGFLNRQIITLLSALGVPDDIFWQMQEAMLWKLNQMLVDADIAFDVL-TKSCAEHGNAAAIMLSCGFSPLTEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDECGVLEQGQCFVQVSTPSLENCFSKHGSRFSETKNLQVVKGFVVIAKNPCLHPGDVRVLEAVDAPDLHHLCDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKRSWIPMEYAAVESKLLTRQVMTRDIIEFFVRNMVNENLGAICNAHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKVVTMPHHLKPKLYPDFMGKENHQSYRSKKILGRLYRRIKDAYDEDIDAPYLNFLTGDIPYDKDLEVPGSADFLVESWEQKCAYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRHIF 3306 WIRTTDFT S IG+ + + +P + A+ + L TL + +P G + F+++F +N +V + L F+ LL NQ K L L+ L ++ L+ ++W+ + + LDD +V + R+ +TP++ Y PEV +SNRVLR + + + FLRV+F+DE ++ + L+ +S ++TK+Y+R+ ++L G +K+ FLAFSS+QLR+ SAW FA +I IR+WMG F+ +NVAK AAR+GQ FSS+ T+ V ++E+ +PDVE YVFSDGIG IS + AR+VA K L PSA+QIRY G+KGVVA P +LSLR SM KF+S +T L++ AW+++QP ++NRQ+ITLLS LGV D +F + Q ++ +L+ +L A + L + E+ N ++ CG+ P EP L ML + RA++L LR K+RIF+S GR +MG LDE LE GQ VQ S P + G RF ++ G VV+AKNPCLHPGDVRVL+AV+ P L+H+ DC+VFPQKG RPH NE SGSDLDGD+YFV WD L+PP R+ PM+Y +++L V ++ E+F +VN++LG I NAH AD A + CI LA+ +TAVDFPKTG +P HL K YPDFM K + +Y SK ++G+L+R +K+ I YDKD+EV G +++ E++ QK YD +L L+ Y +K E E+++G I M K ++++ E + + AL+KE +F Sbjct: 205 WIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGF-------------SLPFEILFKLNTLVQNACLSGPALDLDFYRLL-NQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMDLS----------PRSSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEV-IPDVEIISLGTRYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSK--KLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMGCLDETRTLEYGQVVVQYSDPM------RPGRRF-------IITGPVVVAKNPCLHPGDVRVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPP--RTSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTKRRD--AESIGRAVRALRKETLSLF 1031
BLAST of VigunL057500.1 vs. DB:Swiss
Match: RDR1_ORYSJ (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2) HSP 1 Score: 530.406 bits (1365), Expect = 4.090e-173 Identity = 302/693 (43.58%), Postives = 414/693 (59.74%), Query Frame = 1 Query: 1270 SKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNALNYYVAPIVKEITSNSFPQKTKIYNRVKTILEKGFSFCGRKYSFLAFSSNQLRDRSAWFFAEGK-IRCDEIRSWMGKF-NQKNVAKCAARMGQCFSSTYATVEVVANEVNFSLPDVERNN-YVFSDGIGIISPDLAREVAEKLKLDNI-PSAYQIRYAGFKGVVASWPAKGDGIRLSLRPSMDKFQSSHTILEICAWTRFQPGFLNRQIITLLSALGVPDDIFWQMQEAMLWKLNQMLVDADIAFDVLT-KSCAEHGNAAAIMLSCGFSPLTEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDECGVLEQGQCFVQVSTPSLENCFSKHGSRFSETKNLQVVKGFVVIAKNPCLHPGDVRVLEAVDAPDLHHLCDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKRSWIPMEYAAVESKLLTRQVMTRDIIEFFVRNMVNENLGAICNAHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKVVTMPHHLKPKLYPDFMGKENHQSYRSKKILGRLYRRIKDAYDEDIDAPYLNFLTGDIP---YDKDLEVPGSADFLVESWEQKCAYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRHIFERLSSD 3324 S Y PE+ +SNRV+R F + FLR++F+DE + + L+ A S +T +Y RV ++L G + G+ + FLAFSS+QLRD SAW FA + + +IR+WMG F N +NVAK AAR+GQ FSS+ T++V EV + D++ +VFSDGIG IS A EVA K L PSA+QIRY G+KGVVA P +LSLR SM KFQS + +++ A++++QPGFLNRQ+ITLLS LGV D +F Q QE + +LN+M+ D A + + E NA +L CG+ P EP+L +L + RA++L L+ KSRI + GR +MG LDE L+ GQ F++ ++ +N RF+ V G VVIAKNPCLHPGD+R+L AVD P LHH+ +C+VFPQ+G RPH NE SGSDLDGD+YFV+WD +LIPP R PM+Y ++ L V ++ E+F +VNE+LG I NAHVV AD D A CI LA+L + AVDFPKTG +P L K YPDFM K + +Y SK ++G+LYR IK P++ T ++ YD D+ V G D++ E+ K YD +L L+ Y +K E E+++G I M K ++K RL + +L+KE R F +S D Sbjct: 7 STVYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSA-------SGHDANRTALYKRVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRNVAKYAARLGQSFSSSTETLKVQKYEVE-EISDIKNGTQHVFSDGIGKISSAFANEVAMKCNLKRFAPSAFQIRYGGYKGVVAVDPTSR--WKLSLRKSMLKFQSDNITVDVLAYSKYQPGFLNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKELLLCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIRATSGVNDN------DRFT-------VTGKVVIAKNPCLHPGDIRILHAVDVPVLHHMFNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPP--RMVTPMDYTPAPTETLDHDVTIEEVEEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPELHVKEYPDFMEKLDKVTYESKGVIGKLYREIKK------HTPHIKHFTREVARRSYDTDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRL--AVRSLRKEARSRFSEMSLD 666
BLAST of VigunL057500.1 vs. DB:Swiss
Match: RDR2_ORYSJ (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1) HSP 1 Score: 540.036 bits (1390), Expect = 5.837e-172 Identity = 325/871 (37.31%), Postives = 493/871 (56.60%), Query Frame = 1 Query: 754 WIRTTDFTPSGAIGRCNFYKISIPPRHGAKLMKAMLYLKAQRVQTQELP-PKQTTLRALNEPDFGRPMSDAFFYVDYQKDIS--FDVMFLVNAIVHKGIFNQHRLSDGFFELLRNQSKELNVAALKHLCSYKRPVFDATKRLKLVQEWLHRNPKLYQI-------SKKLDDVVEVRRLVITPSKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNALNYYVAPIVKEITSNSFPQKTKIYNRVKTILEKGFSFCGRKYSFLAFSSNQLRDRSAWFFAE-GKIRCDEIRSWMGKF-NQKNVAKCAARMGQCFSSTYATVEVVANEVNFSLPDVE----RNNYVFSDGIGIISPDLAREVAEKLKLD--NIPSAYQIRYAGFKGVVASWPAKGDGIRLSLRPSMDKFQSSHTILEICAWTRFQPGFLNRQIITLLSALGVPDDIFWQMQEAMLWKLNQMLVDADIAFDVLTKSCAEHGNAAAIMLSCGFSPLTEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDECGVLEQGQCFVQVSTPSLENCFSKHGSRFSETKNLQVVKGFVVIAKNPCLHPGDVRVLEAVDAPDLHHLCDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKRSWIPMEYAAVESKLLTRQVMTRDIIEFFVRNMVNENLGAICNAHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKVVTMPHHLKPKLYPDFMGKENHQSYRSKKILGRLYRRIKDAYDEDIDAPYLNFLTGDIP--YDKDLEVPGSADFLVESWEQKCAYDGQLSGLLGQYKVKREEEVVTGQIWSMPKY---NSRKQGELKERLKHSYSALKKEFR 3297 W+R DFTP+ + GRC+ + KL K+ L + LP +N D S+ V +D S ++V+F +N+++H G ++ F+ L+ +++ + + + + L+ +Q+ + + + + + +++ R+ ITPSK +C PE E++N V++ + F+RVTF+DE ++ NA++ + E S P KT +Y R+ +IL+KGFS + + FLAFS++QLR S W FA + IR WMG F N ++V+KCAARMGQ FSS+ T EV+ +V +PD+E + Y+FSDGIG IS A+ VA + LD N+PSA+QIRY G+KGV+A P I LSLRPSM KF+S +L I +W++ QP ++NR+II+LLS LG+ D+IF MQ+ + + +ML + ++A VL K A ML G+ P +EP+L +L + + +L +R + +I V GR L+G LDE GVLE GQ +++++ S E S +++ V G V I KNPCLHPGD+RVLEA+ PDL + DCLVFPQ+G+RPH NE SG DLDGDLYF+TWDD LIP ++ PM+Y A +++ V +I + FV M+N++LGAI AH++HAD S A +C+ LA L + AVDF KTG MP L+P+ YPDFM + Y S +LG+LYR ++ D+ L+ + YD DLEVPGS +FL + E Y+ +L+ L+ Y+ + E+E++TG I + Y ++++ E+K+R+ + AL +E R Sbjct: 217 WVRALDFTPNYSFGRCSTLVL--------KLGKSALVSDI----LKSLPFSGNLGELTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKIVAKHVNADLFKALQELPVDVSRRIFEKMHKLESTCYGP---LQFIQQEAYSMKRSHNVLLSNEGEGEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWSKLSSNAISARI-----EQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWMFASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEV-IPDIEITTDGSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMS--SIDLSLRPSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEMLTNKEVALSVLGKLGGSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIHVPKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVVGKVAITKNPCLHPGDIRVLEAIYDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIP--EKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSAMGHMEKSGDSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELEDEILTGNIRNKMLYLKRDNKRYFEMKDRIVAAVDALHREAR 1062
BLAST of VigunL057500.1 vs. DB:Swiss
Match: RDR2_ARATH (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1) HSP 1 Score: 520.005 bits (1338), Expect = 2.347e-164 Identity = 325/889 (36.56%), Postives = 485/889 (54.56%), Query Frame = 1 Query: 754 WIRTTDFTPSGAIGRCNFYKISIPPRHGAKLMKAMLYLKAQRVQTQELPPKQTTLRALNEPDFGRPMSDAFFYVDYQKDISFDVMFLVNAIVHKGIFNQHRLSD-GFFELLRNQSKELNVAALKHLCSYKR----PVFDATKRLKLVQEWLHRNPKLYQISKKLDDVVEVRRLVITPSKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNALN------YYVAPIVKEITSNSFPQKTKIYNRVKTILEKGFSFCGRKYSFLAFSSNQLRDRSAWFFAEG-KIRCDEIRSWMGKFNQ-KNVAKCAARMGQCFSSTYATVEVVANEVNFSLPDVERN----NYVFSDGIGIISPDLAREVAEKLKLDNIPSAYQIRYAGFKGVVASWPAKGDGIRLSLRPSMDKFQSSHTILEICAWTRFQPGFLNRQIITLLSALGVPDDIFWQMQEAMLWKLNQMLVDADIAFDVLTKSCAEHG-NAAAIMLSCGFSPLTEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDECGVLEQGQCFVQVSTPSLENCFSKHGSRFSET-KNLQVVKGFVVIAKNPCLHPGDVRVLEAVDAPDLHH--LCDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKRSWIPMEYAAVESKLLTRQVMTRDIIEFFVRNMVNENLGAICNAHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKVVTMPHHLKPKLYPDFMGKENHQSYRSKKILGRLYRRIK--------DAYDEDIDAPYLNFLTGDIPYDKDLEVPGSADFLVESWEQKCAYDGQLSGLLGQYKVKREEEVVTGQIWSMPKY---NSRKQGELKERLKHSYSALKKEFRHIFERLSSD 3324 WIRTTDF+ S +IG + + + +G+ ++ L R T L A + ++ A +++ ++++F +NA+VH + SD ++LR S E + LK L PVF +++ V + + +P +++ +R +TPSK Y + PE+E +N V++ F E F+RVTF++E + NAL+ Y+V P +T IYNRV +IL +G + +++ FLAFS++QLR S W FA K++ ++IR WMG F + ++++KCAARMGQ FS++ T+ V A +V +PD+E +Y FSDGIG IS A++VA+K L ++PSA+QIRY G+KGV+A + +LSLR SM KF S++ +L + WT P FLNR+II LLS LG+ D +F MQ L L ML D D A +VL K E+ N ML G++P +EP+L ML +QL L+ + RI V GR L+G +DE G+LE GQ +V+V+ E S+ S F + + VV G VV+ KNPCLHPGD+RVL+A+ DC++FPQKG+RPH NE SG DLDGD +FV+WD+ +IP PM+YA +L+ V +I +FFV M+++ LG I AH+VHAD A +KC+ LA L + AVDF KTG MP+ LKP+ +PDF+ + +Y S+ + G+LYR +K +A ED + YD LE G F+ + + Y +L+ L+ Y EEE++TG + + Y ++R+ G++K+R+ S L KE FE+ D Sbjct: 219 WIRTTDFSGSKSIGTSTCFCLEV--HNGSTMLDIFSGLPYYREDTLSLTYVDGKTFA-SAAQIVPLLNAAILGLEF----PYEILFQLNALVHAQKISLFAASDMELIKILRGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSKLPANALSVNSKEGYFVK-----------PSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVE-QIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAV--DRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAE-LKSRDQSYFRKIDEETSVVIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIPSEMDP--PMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVKSSLAQRKPEAESEDT-----------VAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCED 1072
BLAST of VigunL057500.1 vs. DB:Swiss
Match: RDP1_SCHPO (RNA-dependent RNA polymerase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rdp1 PE=1 SV=1) HSP 1 Score: 333.183 bits (853), Expect = 5.515e-95 Identity = 244/795 (30.69%), Postives = 399/795 (50.19%), Query Frame = 1 Query: 985 KDISFDVMFLVNAIVHKGIFNQHRLSDGFFELLRNQSKELNVAALKHLCSYKRPVFDATKRLKLVQEWLHRNPKLYQISKKLDDVVEVRRLVITPSKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNALNYYVAPIVKEITSNSFPQKTKIYNRVKTILEKGFSFCGRKYSFLAFSSNQLRDRSAWFFAEGK-IRCDEIRSWMGKFNQKN-VAKCAARMGQCFSSTYATVEVVANEVNFSLPD-VERNNYVFSDGIGIISPDLAREVAEKLK-LDNIPSAYQIRYAGFKGVVASWPAKG----DGIRLSLRPSMDKFQSSHTILEICAWTRFQPGFLNRQIITLLSALGVPDDIFWQMQEAMLWKLNQMLVDADIAFDVLTKSCAEHGNAAAI--MLSCGFSPLTEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDECG---------VLEQGQCFVQVSTPSLENCFSKHGSRFSETKNLQVVKGFVVIAKNPCLHPGDVRVLEAVDAPDLHHLCDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKRSWIPMEYAAVES-KLLTRQVMTRDIIEFFVRNMVNENLGAICNAHVVHA---DSSDYGALDEKCIHLAELAATAVDFPKTGKVVTMPHHLKPKLYPDFMGKENHQSYRSKKILGRLYRRIKDAYDEDIDAPYLNFLTGDIPYDKDLEVPG-SADFLVESWEQKCAYDGQLSGLLGQYKVKREEEVVTGQI-WSMPKYNSRKQGELKERLKHSYSALKKEF 3294 K+I ++ +L+ A + K + ++ L L+ SKE L+ + + K + + ++ L + ++ Y +S + +++L +TP+ + +E NRV+R F++ ++ F+RV DE YY I S+ F + K+Y+R++ +L G + Y FLAF ++QLR+ A+FFA G + +IR WMG F++ N V+K AARMGQCFS+T E+ V+ SL D + RNN+ F+DG+G+ S + R ++ ++K D PSA+Q R G+KGV++ P G + R S DKF+S H+ LE+ +RF LN Q+ITLL LGV +F ++ + L K+N+ + + +L + E+ + I + GF + +L L ++EK ++ V G +L+GV DE G VL + F+Q++ S + GS + +V+ G ++A+NP LHPGDVRV +AV +L HL + +VFP GDR SG DLDGD Y V WD L+P +E + +S L + + + EFFV + ++LG I NA A D++ G C+ LAE+ + AVDF K+G M PK YPDFM K +S+RS+ +G+++R E N + + YD +++P ++L + E K YD L ++ ++ + E EV T I + + + L+E + + LKK++ Sbjct: 376 KEIEEEIAYLLQACLSKNLLSEIDLP-IILANLKKLSKERAKKFLRLILTSKTALINPSE-LDFTKSFV-----FYDLSSA--SSIHIKKLYVTPTTLRIVEDSLEAGNRVIRNFKDFANRFMRVQITDE-----------YYKQKI--RGGSDGF-RNEKLYSRIQQLLTYGIKVGNQIYEFLAFGNSQLREHGAYFFASGSDLNAKQIREWMGDFSEINSVSKYAARMGQCFSTTK---EINRFCVDISLQDDIVRNNHCFTDGVGMASLSVIRRLSLEVKNHDMFPSAFQFRMGGYKGVLSLAPPTKLEYHQGNLVFPRRSQDKFKSFHSTLEVIKISRFSNAHLNMQLITLLEGLGVEKTVFLELTRSQLSKMNESINSKQKSILMLRDNVDEYHSTLIIADFIQAGFLERDDAFTENLLNLYYEWVLRLIKEKQKVSVPKGAYLLGVADETGTLKGHYDDAVLSVPEIFIQITDTS-----TSFGSYSTGKLKTRVIVGLCIVARNPSLHPGDVRVCKAVRCDELMHLKNVIVFPTTGDRSIPAMCSGGDLDGDEYTVIWDQRLLPKIVNYPPLLESSPKKSIDFLEGKPLIDSVKEFFVNYIKYDSLGLISNAWKAWAHDHDNNPEGIFGNVCLELAEMHSKAVDFAKSGVACKMQAKYHPKRYPDFMQKTKTRSFRSETAVGKIFRYAARFQRESGRPATYNPIMNTV-YDPCMKLPRFKTEYLNVAEEVKKHYDNDLRSIMARFDISTEYEVYTAFILFKDDLAKTVNEYGLREEVSFQFDLLKKKY 1138
BLAST of VigunL057500.1 vs. DB:Swiss
Match: RDR5_ARATH (Probable RNA-dependent RNA polymerase 5 OS=Arabidopsis thaliana OX=3702 GN=RDR5 PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 1.563e-23 Identity = 124/559 (22.18%), Postives = 219/559 (39.18%), Query Frame = 1 Query: 1531 FLAFSSNQLRDRSAWFFAEGKIRCDEIRSWMGKFNQKNVAKCAARMGQCFSSTYATVEVVANEVNFS--------------LPDVERNNYVFSDGIGIISPDLAR--------------EVAEKLKLDNIPSAYQIR--YAGF--KGVVA--------SWPAKGDGIRLSLRPSMDKFQSSHTILEICAWTRFQPGFLNRQIITLLSALGVPDDIFWQMQEAMLWKLNQMLVDADIAFDVLTKSCAEHGNAAAIMLSCGFSPLTEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDECGVLEQGQCFVQVSTPSLENCFSKHGSRFSETKNLQVVKGFVVIAKNPCLHPGDVRVLEAVDAPDLHHLCD----CLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLI-------------PPSKRSWIPMEYAAVESKLLTRQVMTRDIIEFFVRNMVN---ENLGAICNAHVVHAD--SSDYGALDEKCIHLAELAATAVDFPKTGKVVTMPHHLKPKLYPDFMGKENHQSYRSKKILGRLYRRIKDAYDED 3021 F+ S D + GK + +M +A AR S T T+EV + F + D + + SDG G IS DLAR E ++ + P Q R Y G+ KG + + I++S PS+ F + + + + + L++ ++ LLS G+P++ F + L + + + A + AA M+ G PL EPHL+ L+ + L+ ++ V+ +LMG +D G L++ + V + + + G V++ +NP LH GD+ +L+A L + FPQKG R +E +G D DGD+YF++ + L+ PPSK + +L F N++ ++ I + ++ D + + + +K + L ++ A+D PK G V +P+ LKP ++P +M E + ++S ILG ++ +K E+ Sbjct: 308 FIRTDSTAFYDMQNPYILTGKSIYEARMHFMHVHRAPTLANYMARFSLILSKT-KTLEVDMTGITFDQIDDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQNAAQMILVGI-PLDEPHLKNYLSILLKTEKNDLK-AGKLPVTESYYLMGTVDPTGALKEDEVCVILESGQ--------------------ISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKGDKVYLPNKLKPDIFPHYM--ERDKKFQSTSILGLIFDFVKSQTTEE 841
BLAST of VigunL057500.1 vs. DB:Swiss
Match: RDR3_ARATH (Probable RNA-dependent RNA polymerase 3 OS=Arabidopsis thaliana OX=3702 GN=RDR3 PE=3 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 9.576e-22 Identity = 130/544 (23.90%), Postives = 217/544 (39.89%), Query Frame = 1 Query: 1759 VFSDGIGIISPDLAREV------AEKLKLDNIPSA-------------------YQIRYAGF--KGVVAS---WPAKGDGIRLSLRPSMDKFQSSHTILEICAWTRFQ---------PGFLNRQIITLLSALGVPDDIFWQMQEAMLWKLNQMLVDADIAFDVLTKSCAEHGNAAAIMLSCGFSPLTEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDECGVLEQGQCFVQVSTPSLENCFSKHGSRFSETKNLQVVKGFVVIAKNPCLHPGDVRVLEAVDAPDLHHLCD----CLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKRSWIPMEYAAVESKL----------------------LTRQVMTRDIIEFFVRNMVNENLGAICNAHVVHADSSDYGALDEK--CIHLAELAATAVDFPKTGKVVTMPHHLKPKLYPDFMGKENHQSYRSKKILGRLYRRIKDAYDEDIDAPYLNFLTGDIPYDKDLEVPGSADFLVESWEQKCAYDGQLS-GLLGQYKVKREE 3186 + SDG G IS DLAR + ++ +NI S ++I Y G+ KG + P + + +RPSM K T+ + + + L+R ++ LLS GVP+D F + L + + AF + A I++ PL EP+L+ L+ + L+ R + ++MG +D G L++ E C H + S G V++ +NP LH GD+ VL+A L + FPQKG R +E +G D DGD+YF++ + L+ K S P ++ SK+ L + RD+I M + I + + D S + K + L ++ A+D PK G V +P L+ K +P +M ++ + +RS ILG ++ + D+++ + P + Y +D VP S SW + Y ++S ++ KVKR + Sbjct: 401 IHSDGTGYISEDLARMCPVNIFKGKSMRSNNIQSKNLNFEGQGPCGQEPPLLIQFRIFYNGYAVKGTFLTNKKLPPR----TVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRKARLSRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYGDDQYTADMILVGI---PLDEPYLKDRLSYLLKTERNALKA-GRFPIDESYYIMGTVDPTGELKEN-----------EICVILHSGQIS---------GDVLVYRNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSE-PWVSSSKPSKIYCGRKPSELSEEELEEELFKMFLKARFCKRDVI-----GMAADCWLGIMDPFLTLGDESAKEKYERKKNILKLIDIYYDALDAPKKGAKVDLPPDLEIKNFPHYMERDPKRDFRSTSILGLIFDTV-DSHNAEEPPPS---EISKLWYFEDEPVPKSHMDKFTSWYEN--YRSEMSQAMMETDKVKRNQ 904
BLAST of VigunL057500.1 vs. DB:Swiss
Match: RDR4_ORYSJ (Probable RNA-dependent RNA polymerase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR4 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 2.405e-21 Identity = 95/380 (25.00%), Postives = 158/380 (41.58%), Query Frame = 1 Query: 1930 SMDKFQSSHTILEICAWTRFQPGFLNRQIITLLSALGVPDDIFWQMQEAMLWKLNQMLVDADIAFDVLTKSCAEHGNAAAIMLSCGFSPLTEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDECGVLEQGQCFVQVSTPSLENCFSKHGSRFSETKNLQVVKGFVVIAKNPCLHPGDVRVLEAVDAPDLHHLC----DCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLI---PPSKRSWIP--------------MEYAAVESKLLTRQVMTRDIIEFFVRNMVNENLGAICNAHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKVVTMPHHLKPKLYPDFMGKENHQSYRSKKILGRLYRRIKD 3006 S+ QS ++ + R F + +I LL GVP++ F ++ + + + + D A ++ + A M+ G PL E +L+ L + G++ +I + +LMG D G L + V + + V G V++ K P LHPGD+ VL+A + D+ + ++FP G R +E + SD DGD+Y+V+ + L+ PSK W+P + +E L + TR + L + V D S+ +++K + L +L A+D PK G V +P L K YP FM + SY S ILG++Y + D Sbjct: 675 SLSGVQSVNSFEIVSTSNRSGRTFTSNNLIALLHYGGVPEEFFMELLQTAIEEADNARFDYAGALNIAFNYADMEDSMPARMILSGI-PLEESYLQSRLDFLSLLERKGIK-NGKIPIDDCYYLMGTADPTGKLGPNEVCVIL--------------------DYGQVSGDVLVYKYPGLHPGDIHVLKATYSSDIEKVVGNSKHAILFPTTGQRSLADEMANSDFDGDIYWVSLNPKLLEHFKPSK-PWVPAITPNGTKQKGPEDFNESELERVLFHEFLKTRFAPSYARATAATNWLVYMDRLLTVSLDESEKKLIEKKMLKLVDLYYLALDAPKMGNKVNIPRDLMVKQYPHFMDRS--PSYHSSSILGKIYDKAGD 1029 The following BLAST results are available for this feature:
BLAST of VigunL057500.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >VigunL057500.1_Vu_IT97K-499-35_v1.1 ID=VigunL057500.1_Vu_IT97K-499-35_v1.1; Name=VigunL057500.1; organism=Vigna unguiculata; type=mRNA; length=4314bpback to top protein sequence of VigunL057500.1_Vu_IT97K-499-35_v1.1 >VigunL057500.1_Vu_IT97K-499-35_v1.1 ID=VigunL057500.1_Vu_IT97K-499-35_v1.1; Name=VigunL057500.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=1131bpback to top mRNA from alignment at contig_465:34911..40814+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>VigunL057500.1_Vu_IT97K-499-35_v1.1 ID=VigunL057500.1_Vu_IT97K-499-35_v1.1; Name=VigunL057500.1; organism=Vigna unguiculata; type=mRNA; length=5904bp; location=Sequence derived from: contig_465:34911..40814+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at contig_465:34911..40814+ >VigunL057500.1_Vu_IT97K-499-35_v1.1 ID=VigunL057500.1_Vu_IT97K-499-35_v1.1; Name=VigunL057500.1; organism=Vigna unguiculata; type=CDS; length=3393bp; location=Sequence derived from: contig_465:34911..40814+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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