Vigun01g135300.1

Transcript Overview
NameVigun01g135300.1
Unique NameVigun01g135300.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length2158
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu01supercontigVu01:31506669..31508826 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun01g135300Vigun01g135300_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g135300.1Vigun01g135300.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun01g135300.1_Vu_IT97K-499-35_v1.1Vigun01g135300.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g135300.1.v1.1.five_prime_UTR.1Vigun01g135300.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g135300.1.v1.1.CDS.1Vigun01g135300.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g135300.1.v1.1.three_prime_UTR.1Vigun01g135300.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
The following BLAST results are available for this feature:
BLAST of Vigun01g135300.1 vs.
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun01g135300.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g135300.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g135300.1; organism=Vigna unguiculata; type=mRNA; length=2158bp
caaaatagtagtaaagcacaagtgagtggtggagttagtaaacttagggg
tgcaggaaatagttactggaggtgtgtgtaatgaaacataggttataatc
agtagcaacaagtcaaaaacgggcccaaaataaacaaggggtatgggagt
gtgcagggattaaaaaattggggtgcaatggagaaaaatacacgaccaga
aacaaaacaaatgaatggaggtgtacagattaaaaGAGGGGGTGCACGAA
GGAGTTCCTAAAGCAAAAGAGGGTGTGAAAAATAAAGATGAAGGTCCAGC
GAGCAGAAGTGGGCTGATCCAATTTATTCAAAATAAAAAAAATAACCCTA
ATTAAAGCTCAATCTCTCCATGGCAGCCCCTGCCTTCGTCGTCACCGCAT
ACCACAATAGCTCCGGGGACGCGCGTCTGCTCATCCTTAAACGCCGGCga
cgacggcggcaccgtcgacggagctgccggcatttgtgtcaccatctcga
cctcatttctccttttcgcgagcgctccttcgttctcgtgttCCGCATGT
GAGGCTCCTTCGTCGCACCTCCGTAGCCAAACAAGACTTGCCGCCACCGT
GCCGACCACCGCGATTGGGACACGCGAGCATCATTGAACCCAACCCCTGG
CCTTCATGACCCGGATCACCTCCGCTACACCCCAAGCCTTTCATTCTTCT
TCTCGTGCGAATCACCAAGTTTTGGGAGCCACGACACTGAGCCCTACCGT
CGCGCGACCAGCCATGGTCGAAGCCGCCGATGATTCGCCCACTCGAACTC
CGACTCGTCGGTGACCTTGGTTTTATCTCCTTCTTTTGTTATCTGCTTCC
GAATCGTGCTGGGTTATGATGATGAACTTAGGTGTTTCGCTACATCCGTG
GCTCGAGGGtgatgaaatgatggtgtaggtggaagatgaagatgatgatg
GGTTATTTCAATGATGGAGAGATGTGAATCTGTTGATCTGAGCGTGTGCG
TTCTGGTTTTGGGTGAGTGGAGTGGAGAAAACCGAGAACGGAAGTGACGG
TTACGAATGGGCTGCTGTTATGGCTCGAGGATGATGAATGATGTGGGTAG
AAAGGTGGGTTTGGAGTGTTGTATTGATTTGCTTCTTGTGTTTTGTTTGC
AGGTTGAAATGGAGTTGTGAAGTTGAGATGGGAGTGGGAATGTCGCAATC
GTGAGGGTGAAAGTGCACGAAgggtctcaggtggtgccaaattgggatga
agacttgtgggataaaacttgatttgtgtgtgcgtttgtgctgagtttgg
tctctgttttcctttggcttctatgcaggtgaatgatgaagatgtgggtg
aatagaaacgcagatggaaaatgcagggctgaagatgaaggttggcgatg
atggaAACTGATGGTTGGAATTTGGTTGATCACGGTGAAGTGGTGGATGA
AACTGATTTGGGGTTATGTGTGTACAGGCGGCGGAGGAGAATAGAGTGGC
GGGAGGATTCAATCGAGGGGATAATGGAGATTCAAGCAACAATGTACACA
ACAGATTCGACTAATCAAATAAATGACACGCAAAACTCAGCAAAACTCAA
TATACACGACTACATTTTATTCATTCTCAAGCACAACACAACAGCATCAG
GTTCACCTCAAACGTTCAAACATTATCTAGATGAAATACTTACCTCTCGT
AGTCTCTATCAGTGGCTTCACATCTCAAACGATTCTTTCCCCCTTGGTTC
GCCTGCTTTGTTTTCCAAGTGTTATCCTCGCCTCTTCTGCTTTGGCTTGT
GCATTCTCTCTAATCAGTGTGCCTTGAGTGCTTCCAACCAGTTCCCCTTC
TTCGCTGGTGCTCTCTTTTTTGTATGAAAAGTTACTTCCTGCCCTCTAAC
CATAGCTGCGTTGCTACTCCTGTCATGGCTCCCATCATTTCCTTTTTCGT
GTCAAGTCTCCAAAAATAGGATAACGTATGAAAATGGCTATACTTTTGCA
TGGACGAGAAAGGGATGGCAGGATCCGGTCAAATGACCTTTATATATTTT
TTTTCATTTTATACATTTTATATATTTTTTTTAAGAGaataaaaacaaaa
tggtgtgaaaataaaataaaatgaaaactgaaattaaatcaaaaagataa
aatgagaa
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protein sequence of Vigun01g135300.1_Vu_IT97K-499-35_v1.1

>Vigun01g135300.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g135300.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g135300.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=159bp
METDGWNLVDHGEVVDETDLGLCVYRRRRRIEWREDSIEGIMEIQATMYT
TDSTNQINDTQNSAKLNIHDYILFILKHNTTASGSPQTFKHYLDEILTSR
SLYQWLHISNDSFPLGSPALFSKCYPRLFCFGLCILSNQCALSASNQFPF
FAGALFFV*
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mRNA from alignment at Vu01:31506669..31508826+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun01g135300.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g135300.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g135300.1; organism=Vigna unguiculata; type=mRNA; length=2158bp; location=Sequence derived from: Vu01:31506669..31508826+ (Vigna unguiculata
CAAAATAGTAGTAAAGCACAAGTGAGTGGTGGAGTTAGTAAACTTAGGGG
TGCAGGAAATAGTTACTGGAGGTGTGTGTAATGAAACATAGGTTATAATC
AGTAGCAACAAGTCAAAAACGGGCCCAAAATAAACAAGGGGTATGGGAGT
GTGCAGGGATTAAAAAATTGGGGTGCAATGGAGAAAAATACACGACCAGA
AACAAAACAAATGAATGGAGGTGTACAGATTAAAAGAGGGGGTGCACGAA
GGAGTTCCTAAAGCAAAAGAGGGTGTGAAAAATAAAGATGAAGGTCCAGC
GAGCAGAAGTGGGCTGATCCAATTTATTCAAAATAAAAAAAATAACCCTA
ATTAAAGCTCAATCTCTCCATGGCAGCCCCTGCCTTCGTCGTCACCGCAT
ACCACAATAGCTCCGGGGACGCGCGTCTGCTCATCCTTAAACGCCGGCGA
CGACGGCGGCACCGTCGACGGAGCTGCCGGCATTTGTGTCACCATCTCGA
CCTCATTTCTCCTTTTCGCGAGCGCTCCTTCGTTCTCGTGTTCCGCATGT
GAGGCTCCTTCGTCGCACCTCCGTAGCCAAACAAGACTTGCCGCCACCGT
GCCGACCACCGCGATTGGGACACGCGAGCATCATTGAACCCAACCCCTGG
CCTTCATGACCCGGATCACCTCCGCTACACCCCAAGCCTTTCATTCTTCT
TCTCGTGCGAATCACCAAGTTTTGGGAGCCACGACACTGAGCCCTACCGT
CGCGCGACCAGCCATGGTCGAAGCCGCCGATGATTCGCCCACTCGAACTC
CGACTCGTCGGTGACCTTGGTTTTATCTCCTTCTTTTGTTATCTGCTTCC
GAATCGTGCTGGGTTATGATGATGAACTTAGGTGTTTCGCTACATCCGTG
GCTCGAGGGTGATGAAATGATGGTGTAGGTGGAAGATGAAGATGATGATG
GGTTATTTCAATGATGGAGAGATGTGAATCTGTTGATCTGAGCGTGTGCG
TTCTGGTTTTGGGTGAGTGGAGTGGAGAAAACCGAGAACGGAAGTGACGG
TTACGAATGGGCTGCTGTTATGGCTCGAGGATGATGAATGATGTGGGTAG
AAAGGTGGGTTTGGAGTGTTGTATTGATTTGCTTCTTGTGTTTTGTTTGC
AGGTTGAAATGGAGTTGTGAAGTTGAGATGGGAGTGGGAATGTCGCAATC
GTGAGGGTGAAAGTGCACGAAGGGTCTCAGGTGGTGCCAAATTGGGATGA
AGACTTGTGGGATAAAACTTGATTTGTGTGTGCGTTTGTGCTGAGTTTGG
TCTCTGTTTTCCTTTGGCTTCTATGCAGGTGAATGATGAAGATGTGGGTG
AATAGAAACGCAGATGGAAAATGCAGGGCTGAAGATGAAGGTTGGCGATG
ATGGAAACTGATGGTTGGAATTTGGTTGATCACGGTGAAGTGGTGGATGA
AACTGATTTGGGGTTATGTGTGTACAGGCGGCGGAGGAGAATAGAGTGGC
GGGAGGATTCAATCGAGGGGATAATGGAGATTCAAGCAACAATGTACACA
ACAGATTCGACTAATCAAATAAATGACACGCAAAACTCAGCAAAACTCAA
TATACACGACTACATTTTATTCATTCTCAAGCACAACACAACAGCATCAG
GTTCACCTCAAACGTTCAAACATTATCTAGATGAAATACTTACCTCTCGT
AGTCTCTATCAGTGGCTTCACATCTCAAACGATTCTTTCCCCCTTGGTTC
GCCTGCTTTGTTTTCCAAGTGTTATCCTCGCCTCTTCTGCTTTGGCTTGT
GCATTCTCTCTAATCAGTGTGCCTTGAGTGCTTCCAACCAGTTCCCCTTC
TTCGCTGGTGCTCTCTTTTTTGTATGAAAAGTTACTTCCTGCCCTCTAAC
CATAGCTGCGTTGCTACTCCTGTCATGGCTCCCATCATTTCCTTTTTCGT
GTCAAGTCTCCAAAAATAGGATAACGTATGAAAATGGCTATACTTTTGCA
TGGACGAGAAAGGGATGGCAGGATCCGGTCAAATGACCTTTATATATTTT
TTTTCATTTTATACATTTTATATATTTTTTTTAAGAGAATAAAAACAAAA
TGGTGTGAAAATAAAATAAAATGAAAACTGAAATTAAATCAAAAAGATAA
AATGAGAA
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Coding sequence (CDS) from alignment at Vu01:31506669..31508826+

>Vigun01g135300.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g135300.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g135300.1; organism=Vigna unguiculata; type=CDS; length=477bp; location=Sequence derived from: Vu01:31506669..31508826+ (Vigna unguiculata
ATGGAAACTGATGGTTGGAATTTGGTTGATCACGGTGAAGTGGTGGATGA
AACTGATTTGGGGTTATGTGTGTACAGGCGGCGGAGGAGAATAGAGTGGC
GGGAGGATTCAATCGAGGGGATAATGGAGATTCAAGCAACAATGTACACA
ACAGATTCGACTAATCAAATAAATGACACGCAAAACTCAGCAAAACTCAA
TATACACGACTACATTTTATTCATTCTCAAGCACAACACAACAGCATCAG
GTTCACCTCAAACGTTCAAACATTATCTAGATGAAATACTTACCTCTCGT
AGTCTCTATCAGTGGCTTCACATCTCAAACGATTCTTTCCCCCTTGGTTC
GCCTGCTTTGTTTTCCAAGTGTTATCCTCGCCTCTTCTGCTTTGGCTTGT
GCATTCTCTCTAATCAGTGTGCCTTGAGTGCTTCCAACCAGTTCCCCTTC
TTCGCTGGTGCTCTCTTTTTTGTATGA
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