Vigun05g232600.1
|
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Vigun05g232600.1 vs. DB:Swiss
Match: PPR8_ARATH (Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E4 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 7.985e-65 Identity = 107/294 (36.39%), Postives = 173/294 (58.84%), Query Frame = 1 Query: 4 MAKPRELVP---LYATLLDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTH 876
M + + LVP + T+L AC + + LK K IH IT GI SN + S L+ Y C + EA +F+ ++ + +++L+ + G +++ IFR M + D + VLK+CAGL+A+RLG+++HG + G ++ +AL+++Y K G +DSA +V+ +M RN +T++ M+ +G EE F+ +V+ G +PD + F +L+AC H G++D+GR YF +M +G+KPG HY+CM+D+LGR G EEAE L+ R E + D +LW LL C +
Sbjct: 255 MHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAAN 544 HSP 2 Score: 93.5893 bits (231), Expect = 7.931e-20 Identity = 72/286 (25.17%), Postives = 134/286 (46.85%), Query Frame = 1 Query: 31 LYATLLDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSY-ACCAQLHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEA-GERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTHGK 882
LYA+LL C+ + + HA + G+ ++ + + L+S Y + E +F + + S++ + + ++L +F MV + TL +K+C+ L +RLG+ HG V+ +GF + S+ L +Y AR+VFD M + + + ++ ++ + + EE LF + G PDG F TVL+AC + + +G+E + + G+ + + ++DM G+ G V EA ++ M K + W ALL +G+
Sbjct: 63 LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKL-ITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGE 346
BLAST of Vigun05g232600.1 vs. DB:Swiss
Match: PPR83_ARATH (Putative pentatricopeptide repeat-containing protein At1g56570 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E64 PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.500e-59 Identity = 111/298 (37.25%), Postives = 174/298 (58.39%), Query Frame = 1 Query: 1 MMAKPRELVPLYATL-LDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSLI----RAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMW-QRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTH 876
M+ + E+ P T+ + A +S + K+IHA I G SN + + ++ Y C L EA F + +N+LI R+ SS ++L +F+ + +T ++ +CA ++AL GQQ+HG + GF ++ +NAL++MY KCG++ +++VF + +RN V++++MM GYG HG E ELFDK+V +G RPD ++F VLSAC H GL++KG +YF +ME +G+ P Y C+VD+LGR G++ EA +L+ RM KPD + W A+L ACK H
Sbjct: 204 MLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSS-----EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAH 496 HSP 2 Score: 102.834 bits (255), Expect = 4.863e-23 Identity = 56/282 (19.86%), Postives = 144/282 (51.06%), Query Frame = 1 Query: 37 ATLLDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEAN-IIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTHG 879
+++L +C + K L +H + + LG+ + ++ + +++ YA C+ EA +IF + + +LI + LG L +++ M+L + + + + +++ A + ++ G+Q+H +V+ GF +L N+++++Y +CG+L A+ F M ++ +T++T++ + E +F + G P+ FT++++AC++ ++ G++ + R G + ++DM + G + +++++ + + + W +++ +HG
Sbjct: 115 SSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI-FRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394 HSP 3 Score: 72.4034 bits (176), Expect = 9.497e-13 Identity = 56/244 (22.95%), Postives = 111/244 (45.49%), Query Frame = 1 Query: 133 FIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCG-HLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLA 861
+ + L+ SY + EA +F + + ++I ++S + +++ F MV + TL VLKSC + L G VHG V+ G L NA++NMY C +++A +F + +N+VT++T++ G+ G+ +++ +++ T + A + + G++ + ++ G + L ++D+ R G + EA+ ME K D W L++
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASV-IKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK-DLITWNTLIS 287
BLAST of Vigun05g232600.1 vs. DB:Swiss
Match: PP315_ARATH (Pentatricopeptide repeat-containing protein At4g16470 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E12 PE=2 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 8.404e-59 Identity = 101/283 (35.69%), Postives = 159/283 (56.18%), Query Frame = 1 Query: 34 YATLLDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEANIIF-SFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTHG 879
YA LL C K KRIHA +G + N++++ KL+ YA L A I+F S IR +N++I + G + L I+ M D++T V ++C+ L L G++ H ++ ++ +ALV+MY KC +VFD++ RN +T+++++ GYG HG+ EV + F+K+ E G RP+ V F VL+AC+HGGL+DKG E+F M+ +G++P HY MVD LGR G+++EA + + + K +W +LL AC+ HG
Sbjct: 111 YAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRD-LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392 HSP 2 Score: 57.3806 bits (137), Expect = 6.965e-8 Identity = 41/184 (22.28%), Postives = 85/184 (46.20%), Query Frame = 1 Query: 331 HTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTHGK 882
T V+L+ C G+++H + V GFAL+ L+ +Y G L +A +F + R+ + ++ M+ GY G +E ++ + + PD F +V ACS ++ G+ +M ++ +K + + +VDM + + ++ ++ + + W +L++ HGK
Sbjct: 109 ETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVM-IKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSLISGYGYHGK 290
BLAST of Vigun05g232600.1 vs. DB:Swiss
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.157e-58 Identity = 103/285 (36.14%), Postives = 168/285 (58.95%), Query Frame = 1 Query: 22 LVPLYATLLDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTH 876
++P+++ +D K IH I GI S+ +I S LV YA A++ ++ +FS + +NSL+ + G ++++L +FR MV A V+ +CA L+ L LG+Q+HG VL GF ++ ++ALV+MY+KCG++ +ARK+FDRM +EV+++ ++ G+ +HG E LF+++ G +P+ V F VL+ACSH GL+D+ YF M +G+ L HY + D+LGR G++EEA I +M V+P G++W LL++C H
Sbjct: 248 VLPIFSEYVDVIKG-------KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525 HSP 2 Score: 107.457 bits (267), Expect = 1.628e-24 Identity = 60/228 (26.32%), Postives = 116/228 (50.88%), Query Frame = 1 Query: 196 IFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTHG 879
+F R+ +N++I ++ G + +L + R M D TL VL + + G+++HG V+ G D+ ++LV+MY K ++ + +VF R++ R+ +++++++ GY +G E LF ++V A +P V F++V+ AC+H + G++ + +R G + + +VDM + G ++ A K+ RM V D W A++ HG
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV-LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHG 423 HSP 3 Score: 104.76 bits (260), Expect = 1.394e-23 Identity = 85/321 (26.48%), Postives = 149/321 (46.42%), Query Frame = 1 Query: 31 LYATLLDACSSAKHLKNLKRIHAMTI-TLGISSNDFIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTK---------CGH---------------------------LDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTHGK 882
L TL+ + K K++HA I T +S S ++S Y LHEA ++F P + S+IR + FS++L+ F M + + D + P VLKSC + LR G+ VHG ++ G DL NAL+NMY K G+ +DS R+VF+ M +++ V+++T++ GY G E+ + ++ +PD ++VL S + KG+E + +R G+ ++ + +VDM + ++E++E++ R+ + DG W +L+A +G+
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS--ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYV-IRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR-DGISWNSLVAGYVQNGR 323
BLAST of Vigun05g232600.1 vs. DB:Swiss
Match: PP223_ARATH (Putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 2.841e-58 Identity = 108/285 (37.89%), Postives = 161/285 (56.49%), Query Frame = 1 Query: 22 LVPLYATLLDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTH 876
LVPL C+ ++L + +H + G+ S + + ++ Y C + +F + +N++I +S G L ++ M + D TL VL SCA L A ++G +V V NGF ++ SNA ++MY +CG+L AR VFD M ++ V+++ M+ YGMHG E LFD +++ G RPDG +F VLSACSH GL DKG E F M+ + ++PG HY+C+VD+LGR G+++EA + I M V+PDGA+W ALL ACK H
Sbjct: 162 LVPL-------CTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIH 439 HSP 2 Score: 112.464 bits (280), Expect = 2.506e-26 Identity = 71/284 (25.00%), Postives = 137/284 (48.24%), Query Frame = 1 Query: 34 YATLLDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEANIIFSFTIR--QPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTHG 879
+ +L +C+S + +++H G + F+ + L+S Y C + +A +F + Q + +N+LI +++ + + +FR M D T+ ++ C L LG+ +HG + G ++A N+ + MY KCG +++ R++FD M + +T++ ++ GY +G +V EL++++ +G PD +VLS+C+H G G E +++E G P + + M R G + +A + M VK W A++ HG
Sbjct: 56 FPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESN-GFVPNVFVSNASISMYARCGNLAKARAVFDIMPVK-SLVSWTAMIGCYGMHG 337 HSP 3 Score: 84.3445 bits (207), Expect = 9.307e-17 Identity = 61/219 (27.85%), Postives = 105/219 (47.95%), Query Frame = 1 Query: 232 FNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNE--VTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGAL-WRALLAACKTHG 879
+N +R + FS+S+S++R M+ + D + P +LKSCA LS GQQ+H V G + AL++MY KCG + ARKVF+ Q ++ V ++ ++ GY + + + +F ++ E G D V ++ C+ + GR V+ G+ + + M + G VE +L M VK G + W A+++ +G
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQC-VKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVK--GLITWNAVISGYSQNG 236
BLAST of Vigun05g232600.1 vs. DB:Swiss
Match: PP258_ARATH (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.356e-58 Identity = 102/282 (36.17%), Postives = 167/282 (59.22%), Query Frame = 1 Query: 40 TLLDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQ--LHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHK-PFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTH 876
+++ ACS + IH+ I G + + L+ +YA + + A IF + + +NS++ ++ G +++ +FR +V F+ TL VL + + ALR+G+ +H V+ G D+ ++++MY KCG +++ARK FDRM +N +++ M+ GYGMHG + ELF ++++G RP+ + F +VL+ACSH GL +G +F M+ RFGV+PGL HY CMVD+LGR G +++A LI RM++KPD +W +LLAAC+ H
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469 HSP 2 Score: 116.316 bits (290), Expect = 1.268e-27 Identity = 78/287 (27.18%), Postives = 145/287 (50.52%), Query Frame = 1 Query: 46 LDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKP------FDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGH--LDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERP-DGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTHG 879
+ ACSS + + K+ H G S+ F+ S L+ Y+ C +L +A +F ++ + S+IR + G ++S+F+ +++ D L V+ +C+ + A L + +H V+ GF ++ N L++ Y K G + ARK+FD++ ++ V+++++M Y G E FE+F +LV+ + + +TVL A SH G + G+ + + +R G++ + T ++DM + G+VE A K RM+ K + W A++A HG
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV-IRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK-NVRSWTAMIAGYGMHG 367 HSP 3 Score: 88.5817 bits (218), Expect = 3.961e-18 Identity = 51/160 (31.87%), Postives = 87/160 (54.37%), Query Frame = 1 Query: 205 FTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELF-DKLVEAGERPDGVI-----FTTVLSACS 666
+ + F +NS+I + G +++L F M R + P +K+C+ L + G+Q H V G+ D+ S+AL+ MY+ CG L+ ARKVFD + +RN V++++M++GY ++G + LF D LV+ + D + +V+SACS
Sbjct: 35 YVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
BLAST of Vigun05g232600.1 vs. DB:Swiss
Match: PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E19 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 1.158e-56 Identity = 105/291 (36.08%), Postives = 165/291 (56.70%), Query Frame = 1 Query: 10 KPRELVPLYATLLDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTHGK 882
KP E + +L+ACS +L+ K++H+ + LG + F + LV YA L +A F + L+ SLI + ++L ++R M A + T+ VLK+C+ L+ L LG+QVHG + +GF L++ +AL MY+KCG L+ VF R ++ V+++ M+ G +G+ +E ELF++++ G PD V F ++SACSH G +++G YF MM + G+ P + HY CMVD+L R GQ++EA++ I + LWR LL+ACK HGK
Sbjct: 319 KPSEYTIV--GVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGK 607 HSP 2 Score: 117.087 bits (292), Expect = 7.686e-28 Identity = 77/291 (26.46%), Postives = 150/291 (51.55%), Query Frame = 1 Query: 10 KPRELVPLYATL---LDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHK---PFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAA 864
+ ++++P TL A SS + ++ HA+ + + + ++ + LV Y + + +F++ + T+ +++++ +++ G +++ +F ++ L K + VL S A + LG+Q+H + NG +A SNALV MY+KC L+ A K+FD RN +T+S M+ GY +GE E +LF ++ AG +P VL+ACS +++G++ + ++ G + L T +VDM + G + +A K ++ + D ALW +L++
Sbjct: 110 RAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF-NLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFL-LKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQER-DVALWTSLISG 397 HSP 3 Score: 104.375 bits (259), Expect = 1.681e-23 Identity = 70/285 (24.56%), Postives = 148/285 (51.93%), Query Frame = 1 Query: 31 LYATLLDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGRE-YFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTHGK 882
++ +L + ++ ++ ++IH +TI G+ + + LV+ Y+ C L+EA +F + + + +++++ +S G +++ +F M A +T+ VL +C+ + L G+Q+H +L GF L + ALV+MY K G L ARK FD + +R+ +++++ GY + + EE L+ ++ AG P+ +VL ACS ++ G++ + ++ FG++ + + + M + G +E+ L++R D W A+++ +G+
Sbjct: 223 VFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDG-NLVFRRTPNKDVVSWNAMISGLSHNGQ 504 HSP 4 Score: 100.138 bits (248), Expect = 4.548e-22 Identity = 86/297 (28.96%), Postives = 140/297 (47.14%), Query Frame = 1 Query: 19 ELVPLYATLLDACSSAKHLKNL---KRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSI---FRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEE---VFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTHGK 882
EL P +TLL + +NL + +H I G S+ + LV+ YA C +L +A+ IF+ I + +NSLI +S G S S ++ FR M + +TL + K+ + L + +G+Q H V+ D+ +LV MY K G ++ KVF M +RN T+STM+ GY G EE VF LF + E G D +FT VLS+ + + GR+ + ++ G+ + +V M + + EA K+ + + W A++ +G+
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQ-IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKM-FDSSGDRNSITWSAMVTGYSQNGE 302 HSP 5 Score: 55.0694 bits (131), Expect = 4.078e-7 Identity = 48/209 (22.97%), Postives = 92/209 (44.02%), Query Frame = 1 Query: 28 PLYATLLDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALD--LANSNALVNMYTKCGHLDSARKVFDR--------MWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGER 624
P A++L ACSS L+ K++H TI G I S L + Y+ C L + N++F T + +N++I S G ++L +F M+ D T ++ +C+ + G + ++ + LD + + +V++ ++ G L A++ + +W+ ++ HG+CE +KL+ G R
Sbjct: 424 PTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG-WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWR-------ILLSACKNHGKCELGVYAGEKLMALGSR 624
BLAST of Vigun05g232600.1 vs. DB:Swiss
Match: PP390_ARATH (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.208e-56 Identity = 113/304 (37.17%), Postives = 172/304 (56.58%), Query Frame = 1 Query: 10 KPRELVPLYATLLDACSSAKHLKNLKRIHAMTITLGIS-------SNDFIRSKLVSSYACCAQLHEANIIF-SFTIRQPTFL-FNSLIRAHSSLGFFSQSLSIFRHMV---LAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNG-FALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTHGK 882
KP E+ + ++L C+S L + K IH I I + + ++L+ YA C ++ A +F S + ++ + + +I +S G +++L + M +P + T+ L +CA L+ALR+G+Q+H L N A+ L SN L++MY KCG + AR VFD M +NEVT++++M GYGMHG EE +FD++ G + DGV VL ACSH G+ID+G EYF M+ FGV PG HY C+VD+LGR G++ A +LI M ++P +W A L+ C+ HGK
Sbjct: 362 KPNEVTLI--SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP-NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662 HSP 2 Score: 120.553 bits (301), Expect = 5.421e-29 Identity = 84/276 (30.43%), Postives = 141/276 (51.09%), Query Frame = 1 Query: 67 KHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQL-HEANIIFSFTIRQP-TFLFNSLIRAHSSLGFFSQSLSIFRHM-VLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLV-EAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTHGK 882
K + +K IH ++ GI + + + S L+S+Y L H +++ F + +NSLIR++ G ++ L +F M L+ P D +T P V K+C +S++R G+ H LV GF ++ NALV MY++C L ARKVFD M + V+++++++ Y G+ + E+F ++ E G RPD + VL C+ G G++ V + + C+VDM + G ++EA + M VK D W A++A G+
Sbjct: 39 KTISQVKLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTP-DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQ-LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMVAGYSQIGR 310 HSP 3 Score: 102.834 bits (255), Expect = 6.279e-23 Identity = 64/214 (29.91%), Postives = 107/214 (50.00%), Query Frame = 1 Query: 43 LLDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMV--LAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGL 678
+ AC ++ + HA+++ G SN F+ + LV+ Y+ C L +A +F +NS+I +++ LG +L +F M +P D TL VL CA L LG+Q+H + + ++ N LV+MY KCG +D A VF M ++ V+++ M+ GY G E+ LF+K+ E + D V ++ +S + GL
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRP-DNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
BLAST of Vigun05g232600.1 vs. DB:Swiss
Match: PP108_ARATH (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H22 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 1.270e-56 Identity = 94/283 (33.22%), Postives = 156/283 (55.12%), Query Frame = 1 Query: 34 YATLLDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTHGK 882
+ ++L AC + K+IHA I + ++ S L+ Y C LH A +F ++ + +++ + G +++ IF M + D +TL + +CA +S+L G Q HG + +G + SN+LV +Y KCG +D + ++F+ M R+ V+++ M+ Y G E +LFDK+V+ G +PDGV T V+SACS GL++KG+ YF++M +G+ P + HY+CM+D+ R G++EEA + I M PD W LL+AC+ G
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555 HSP 2 Score: 128.257 bits (321), Expect = 1.395e-31 Identity = 84/315 (26.67%), Postives = 145/315 (46.03%), Query Frame = 1 Query: 40 TLLDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSL------------------------------IRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHY----TCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTHGK 882
T+L SS H+ K+IH I LG S + S L+ YA + +A +F + T ++NSL I+ + G +++ FR M + D++ VL +C GL A+ G+Q+H ++ F + +AL++MY KC L A+ VFDRM Q+N V+++ M+ GYG G EE ++F + +G PD +SAC++ +++G ++ + GL HY +V + G+ G ++++ +L M V+ D W A+++A G+
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK-----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFGR 452 HSP 3 Score: 70.8626 bits (172), Expect = 3.314e-12 Identity = 57/228 (25.00%), Postives = 103/228 (45.18%), Query Frame = 1 Query: 127 NDFIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKP-FDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKL 807
N F + L+ +Y+ + E F + +N LI +S G ++ + M+ R TL +LK + + LG+Q+HG V+ GF L + L+ MY G + A+KVF + RN V ++++M G G E+ +LF G D V + ++ + GL + E F M+V+ G+K + + ++ G +G + E +++
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF-----RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ-GLKMDQYPFGSVLPACGGLGAINEGKQI 292
BLAST of Vigun05g232600.1 vs. DB:Swiss
Match: PPR68_ARATH (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H11 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.115e-56 Identity = 95/281 (33.81%), Postives = 161/281 (57.30%), Query Frame = 1 Query: 34 YATLLDACSSAKHLKNLKRIHAMTITLGISSNDFIRSKLVSSYACCAQLHEANIIFSFTIRQPTFLFNSLIRAHSSLGFFSQSLSIFRHMVL-AHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMKGYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKT 873
Y LL AC+ K ++ K+IH LG+ ++ F+++ L++ Y C ++ ++ +F + ++S++ A + +G +S+ L +FR M + + + L +CA AL LG +HG +L N L++ +LV+MY KCG LD A +F +M +RN +T+S M+ G +HGE E +F K+++ G PD V++ +VL+ACSH GL+ +GR F M V+P HY C+VD+LGR G +EEA + I + ++ + +WR L+ C+
Sbjct: 135 YPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRV 415 HSP 2 Score: 95.1301 bits (235), Expect = 2.231e-20 Identity = 60/223 (26.91%), Postives = 115/223 (51.57%), Query Frame = 1 Query: 223 TFLFNSLIRAHSSLGFFSQSLSIFRHMVLAHKPFDRHTLPVVLKSCAGLSALRLGQQVHGAVLVNGFALDLANSNALVNMYTKCGHLDSARKVFDRMWQRNEVTFSTMMK---GYGMHGECEEVFELFDKLVEAGERPDGVIFTTVLSACSHGGLIDKGREYFEMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAEKLIWRMEVKPDGALWRALLAACKTHGK 882
TF FN++IR + ++ F ++L + M+ D T P +LK+C L ++R G+Q+HG V G D+ N+L+NMY +CG ++ + VF+++ + ++S+M+ G GM EC +F G++ + L AC++ G ++ G + +R + + T +VDM + G +++A + +ME K + + A+++ HG+
Sbjct: 97 TFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMV--SALLACANTGALNLGMSIHGFL-LRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGE 315 The following BLAST results are available for this feature:
BLAST of Vigun05g232600.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun05g232600.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g232600.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g232600.1; organism=Vigna unguiculata; type=mRNA; length=951bpback to top protein sequence of Vigun05g232600.1_Vu_IT97K-499-35_v1.1 >Vigun05g232600.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g232600.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g232600.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=317bpback to top mRNA from alignment at Vu05:42654309..42655259- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun05g232600.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g232600.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g232600.1; organism=Vigna unguiculata; type=mRNA; length=951bp; location=Sequence derived from: Vu05:42654309..42655259- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu05:42654309..42655259- >Vigun05g232600.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g232600.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g232600.1; organism=Vigna unguiculata; type=CDS; length=951bp; location=Sequence derived from: Vu05:42654309..42655259- (Vigna unguiculataback to top |