Vigun08g046800.1

Transcript Overview
NameVigun08g046800.1
Unique NameVigun08g046800.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length2838
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu08supercontigVu08:5001601..5004522 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun08g046800Vigun08g046800_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g046800.1Vigun08g046800.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun08g046800.1_Vu_IT97K-499-35_v1.1Vigun08g046800.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g046800.1.v1.1.CDS.2Vigun08g046800.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g046800.1.v1.1.CDS.1Vigun08g046800.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g046800.1.v1.1.three_prime_UTR.1Vigun08g046800.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g046800.1.v1.1.five_prime_UTR.1Vigun08g046800.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
The following BLAST results are available for this feature:
BLAST of Vigun08g046800.1 vs.
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..61

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun08g046800.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g046800.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g046800.1; organism=Vigna unguiculata; type=mRNA; length=2838bp
CAAACTCAGTTTTCTCTTCTAAATCGTAAACAAAATGAACCATTGGATTC
ATTTCTACTTTTTCAACTTTTTCAACGAAGTGAGAAAGTGAGAGCATGTT
CCGACAAGAGACAGAGTGAGATCTTACTGAGAGTGTCGAGAAACCAGAAA
ATGGAAAAGGAAAGGGTTGGATCCGCATTCCAGTAAAACGACGCCGTGCT
GCTGCGCATCCAAATCCTCTCTTCTTTTTGTTCAATGGCGGAATCTGAAT
CGCAAGGTCCTTCATGGATCTCCTATGCAGTGTCGTTGTTGATCGTTCTT
CTAATAGTGCTTCACGTCTTCGCCTTGGTCTATTGGATTTATAGATTGGC
CACTGACAATAGGTCGcaacagcagcagcaacaacaacaacaagaacttc
agcaaGTGAGAAGAAAAGCTCACTGATTGAATTAAAAAAAAAAAATCTCA
TTTAGTTTCGTTTTCTACAAACAATTGTTGTGTGAAATTATGTGCATTAG
ATGATAGGATTTTTGTTTTTTTTTTTTGTGTAAGAGTGGTGAATGAGGTT
TCTGTTTATTTTTAAATTGAGTGTTAGTGATATAGTCAACATTGCTTGCT
TTCACAAGCTAGAGTGTGATTTGTTGTGCCAAAATTGAATAATCTCCGAG
GAGTAGAATCTTGCTGCAATTTAGTTCATCTTATGTTCTTTGTATTGTGT
GCTTTGTGTCTTTGGATAAAGTTTTTCATAGATACTTCAAGGACAAAATA
GCAACAAAAACGAAAGAAGTTATTCCATGAGTTATTTATATGTAAAGTAA
TTTGTAGAAGTTCTCGTGTTAGTTTCTCTACAGCATGATTTTTCTTAACC
TATACTAGCTCTCTTGTTCATAGAAGTATTTTATGGTGATGTTTATTCAA
ACATGCATTATGTTTATTTCCGTGATTCAAAAATATCGAAATCAACACCT
ATATGAGAAGAAGAAACAAATGAAACAAGTTTTCTTGTGAGCTTATTTTA
TAAATAAAAATAAGTTACTGGAGAACTTGGCATATGAGAGATTTTATAAA
TTAGATTTTGCAGCAATTTATTTTAATTTATGGAGAAAATTGTTTTATTT
GCTCTCCTCTTCAAGTATTTATATCTATGTATTGCATTCATAGATGTGAA
TGGTGTTACAAATTAAGACTTTGAAGTTGTGGGCTATGGGAAGGGGCATG
GATCTTGGTGTTTAAGTAAGTTGTATCATTTTTGTCGAGAAGTGGGTAAC
AAGGCTGTGATACACCAGGGAGAATGAGGTATTTATGAGCAGTTGAGCAC
TTATGTTGGTATTTAAGGTGGGTAAAAGATGTTTCCTTGGAAACTTGATC
TAAACTGTTTGTTATGAATGATTGCATTGTGTTATTATAGTTTGCCTTAA
CCAAAGGTATTACATTAAATTTTTGGGTGTCTGTTGGAGTCCTGATCTAT
AACCAGAGCTAAACCAGTATCCCGGGATTTAGCTTAGAACTAGAGAAATG
CTAGCAACAATCTTTAATGTACCAATGTAATATATTCTTCAATATTAGTT
GAAATTTATTGAGCCTTTTGTAGCACACTCTTCACTATTGATTAAAATTT
ATTGAGACTCTTGTATCTGGACGAGTCTCACTACATATTAGTGAATATAA
CAATGAATTTGTTAGAAAAAAAGTTGTTAAAGTGTTTACTAGTTAATATT
GATGAGTCCCGGCATTCCTATTTCTCACAATAAAATGATCTTCCTTTGAT
TTCATCTTTCTTATCTTGTCAATGTTGACTTTTTAAGCCTTGGCTGTAGG
TCTTAGAAATATGCATGTGTTTACTTGTTAATTCTGATATTCACACAAGA
AAAAATCTGAAACACCAACAAGTTTGTGAGAATATCTTTGAGAAGTAGAA
AATTTGTCTAGTTCATAGTTTTGTACCATACCTGTTACTGCCTGTAGAGA
ATAAATAATGGGAAATATGAATGATATATCTGCTGTTCACTTAATTTCTG
AACTCGGGTCTCATGTTTACTGGGTTTGTCTGATGTTCATTGAAGTTCCA
TACACACAGAGTACGCAATAAAATTTGGAACAAAAAAGCATTATATACTG
GTTCTGTGATCTAATGCAGGTATCAATCGAAATAAGCGATTGGTAAGGGT
ATGTCTTATGTAATTTAATTTTTGTAACTTCTATAATAACAATAAGTTGC
AGTTTTGGTGTTGGTAATTTTACTTTTATAGATGTGTACAATAGTGTAAG
CTGTGTGCTATTTGATATCAGTGGTCAATTTATATTGCATTTTAGGGAAT
TGGCTTAACCAGTTAACCTATATGTAGCTGCCTGACGTGTAATCTAAAGC
TGAAAGTGATTTCACTGTGCTTCTTAATGGCGtgttttgttttgttttaa
gttttcttttTCCTCCAAAAGTGTGGTTTGGATGAACTCTAAATTTGGTC
TTTGTGGTTGGTTGGGACGACTTTAGTCTCTTTTGATAAGTAATTTTGGT
CTTAACGATTGGGGAACTTTTTGATGTTCATACCCCACTGAAGCACTAGT
AGAATGGTGCAACTCTACCAAAATCTTTTGGAAATAGTTTATGTTTAACT
TTCTTTTTCATATGAAAGGATATGTGAAAATTTGGCATAAAGTAATTCAT
CTCTTTAGTTTAACGAGTTATGCTTATGTCTTAATAGAAGGGGTTAGTTG
ATCCTTCACAAAATAATGAATTTCGGTTTAAGTCTTCATCCATAAAACAT
TCCCACTTTATCCGATTTATTTTAAACATAATTATATGGATTGGTTTTGT
ATTTTTAAAACTAATGTTTTTTAATATGTTAAACAGGT
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protein sequence of Vigun08g046800.1_Vu_IT97K-499-35_v1.1

>Vigun08g046800.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g046800.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g046800.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=64bp
MAESESQGPSWISYAVSLLIVLLIVLHVFALVYWIYRLATDNRSQQQQQQ
QQQELQQVRRKAH*
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mRNA from alignment at Vu08:5001601..5004522-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun08g046800.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g046800.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g046800.1; organism=Vigna unguiculata; type=mRNA; length=2922bp; location=Sequence derived from: Vu08:5001601..5004522- (Vigna unguiculata
CAAACTCAGTTTTCTCTTCTAAATCGTAAACAAAATGAACCATTGGATTC
ATTTCTACTTTTTCAACTTTTTCAACGAAGTGAGAAAGTGAGAGCATGTT
CCGACAAGAGACAGAGTGAGATCTTACTGAGAGTGTCGAGAAACCAGAAA
ATGGAAAAGGAAAGGGTTGGATCCGCATTCCAGTAAAACGACGCCGTGCT
GCTGCGCATCCAAATCCTCTCTTCTTTTTGTTCAATGGCGGAATCTGAAT
CGCAAGGTCCTTCATGGATCTCCTATGCAGTGTCGTTGTTGATCGTTCTT
CTAATAGTGCTTCACGTCTTCGCCTTGGTAGCCCTAACAATTTAACTCTT
CTTCTTCCTCTTCTTCACCTTATCAAAACCTAATCTAATCACTTTTATCT
CTCTTTTTCAGGTCTATTGGATTTATAGATTGGCCACTGACAATAGGTCG
CAACAGCAGCAGCAACAACAACAACAAGAACTTCAGCAAGTGAGAAGAAA
AGCTCACTGATTGAATTAAAAAAAAAAAATCTCATTTAGTTTCGTTTTCT
ACAAACAATTGTTGTGTGAAATTATGTGCATTAGATGATAGGATTTTTGT
TTTTTTTTTTTGTGTAAGAGTGGTGAATGAGGTTTCTGTTTATTTTTAAA
TTGAGTGTTAGTGATATAGTCAACATTGCTTGCTTTCACAAGCTAGAGTG
TGATTTGTTGTGCCAAAATTGAATAATCTCCGAGGAGTAGAATCTTGCTG
CAATTTAGTTCATCTTATGTTCTTTGTATTGTGTGCTTTGTGTCTTTGGA
TAAAGTTTTTCATAGATACTTCAAGGACAAAATAGCAACAAAAACGAAAG
AAGTTATTCCATGAGTTATTTATATGTAAAGTAATTTGTAGAAGTTCTCG
TGTTAGTTTCTCTACAGCATGATTTTTCTTAACCTATACTAGCTCTCTTG
TTCATAGAAGTATTTTATGGTGATGTTTATTCAAACATGCATTATGTTTA
TTTCCGTGATTCAAAAATATCGAAATCAACACCTATATGAGAAGAAGAAA
CAAATGAAACAAGTTTTCTTGTGAGCTTATTTTATAAATAAAAATAAGTT
ACTGGAGAACTTGGCATATGAGAGATTTTATAAATTAGATTTTGCAGCAA
TTTATTTTAATTTATGGAGAAAATTGTTTTATTTGCTCTCCTCTTCAAGT
ATTTATATCTATGTATTGCATTCATAGATGTGAATGGTGTTACAAATTAA
GACTTTGAAGTTGTGGGCTATGGGAAGGGGCATGGATCTTGGTGTTTAAG
TAAGTTGTATCATTTTTGTCGAGAAGTGGGTAACAAGGCTGTGATACACC
AGGGAGAATGAGGTATTTATGAGCAGTTGAGCACTTATGTTGGTATTTAA
GGTGGGTAAAAGATGTTTCCTTGGAAACTTGATCTAAACTGTTTGTTATG
AATGATTGCATTGTGTTATTATAGTTTGCCTTAACCAAAGGTATTACATT
AAATTTTTGGGTGTCTGTTGGAGTCCTGATCTATAACCAGAGCTAAACCA
GTATCCCGGGATTTAGCTTAGAACTAGAGAAATGCTAGCAACAATCTTTA
ATGTACCAATGTAATATATTCTTCAATATTAGTTGAAATTTATTGAGCCT
TTTGTAGCACACTCTTCACTATTGATTAAAATTTATTGAGACTCTTGTAT
CTGGACGAGTCTCACTACATATTAGTGAATATAACAATGAATTTGTTAGA
AAAAAAGTTGTTAAAGTGTTTACTAGTTAATATTGATGAGTCCCGGCATT
CCTATTTCTCACAATAAAATGATCTTCCTTTGATTTCATCTTTCTTATCT
TGTCAATGTTGACTTTTTAAGCCTTGGCTGTAGGTCTTAGAAATATGCAT
GTGTTTACTTGTTAATTCTGATATTCACACAAGAAAAAATCTGAAACACC
AACAAGTTTGTGAGAATATCTTTGAGAAGTAGAAAATTTGTCTAGTTCAT
AGTTTTGTACCATACCTGTTACTGCCTGTAGAGAATAAATAATGGGAAAT
ATGAATGATATATCTGCTGTTCACTTAATTTCTGAACTCGGGTCTCATGT
TTACTGGGTTTGTCTGATGTTCATTGAAGTTCCATACACACAGAGTACGC
AATAAAATTTGGAACAAAAAAGCATTATATACTGGTTCTGTGATCTAATG
CAGGTATCAATCGAAATAAGCGATTGGTAAGGGTATGTCTTATGTAATTT
AATTTTTGTAACTTCTATAATAACAATAAGTTGCAGTTTTGGTGTTGGTA
ATTTTACTTTTATAGATGTGTACAATAGTGTAAGCTGTGTGCTATTTGAT
ATCAGTGGTCAATTTATATTGCATTTTAGGGAATTGGCTTAACCAGTTAA
CCTATATGTAGCTGCCTGACGTGTAATCTAAAGCTGAAAGTGATTTCACT
GTGCTTCTTAATGGCGTGTTTTGTTTTGTTTTAAGTTTTCTTTTTCCTCC
AAAAGTGTGGTTTGGATGAACTCTAAATTTGGTCTTTGTGGTTGGTTGGG
ACGACTTTAGTCTCTTTTGATAAGTAATTTTGGTCTTAACGATTGGGGAA
CTTTTTGATGTTCATACCCCACTGAAGCACTAGTAGAATGGTGCAACTCT
ACCAAAATCTTTTGGAAATAGTTTATGTTTAACTTTCTTTTTCATATGAA
AGGATATGTGAAAATTTGGCATAAAGTAATTCATCTCTTTAGTTTAACGA
GTTATGCTTATGTCTTAATAGAAGGGGTTAGTTGATCCTTCACAAAATAA
TGAATTTCGGTTTAAGTCTTCATCCATAAAACATTCCCACTTTATCCGAT
TTATTTTAAACATAATTATATGGATTGGTTTTGTATTTTTAAAACTAATG
TTTTTTAATATGTTAAACAGGT
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Coding sequence (CDS) from alignment at Vu08:5001601..5004522-

>Vigun08g046800.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g046800.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g046800.1; organism=Vigna unguiculata; type=CDS; length=192bp; location=Sequence derived from: Vu08:5001601..5004522- (Vigna unguiculata
ATGGCGGAATCTGAATCGCAAGGTCCTTCATGGATCTCCTATGCAGTGTC
GTTGTTGATCGTTCTTCTAATAGTGCTTCACGTCTTCGCCTTGGTCTATT
GGATTTATAGATTGGCCACTGACAATAGGTCGCAACAGCAGCAGCAACAA
CAACAACAAGAACTTCAGCAAGTGAGAAGAAAAGCTCACTGA
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