Vigun08g132700.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun08g132700.1 vs. DB:Swiss
Match: BL1S1_ARATH (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Arabidopsis thaliana OX=3702 GN=BLOS1 PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.837e-49 Identity = 71/106 (66.98%), Postives = 91/106 (85.85%), Query Frame = 1 Query: 91 SLVLTQRTEKAKKDAIRKTERVSDLLVEAVNGGVQESFINQKRIELEIRALAATIARFMKQTDQWLATTHALNTALKEIGDFENWMKIMEYDCKNITTAIQNIHQE 408 SL L ++TE+++K+AIR R +DLLV+AVNGGV+E F+N+KRIE EIR LA T+A+F KQTDQWLA THA+N+A+KEIGDFENWMK ME+DCK IT AI+NIH++ Sbjct: 45 SLQLREKTERSRKEAIRHAARTADLLVKAVNGGVEECFVNEKRIESEIRNLAITVAKFGKQTDQWLAVTHAVNSAVKEIGDFENWMKTMEFDCKKITAAIRNIHED 150
BLAST of Vigun08g132700.1 vs. DB:Swiss
Match: BL1S1_XENTR (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Xenopus tropicalis OX=8364 GN=bloc1s1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.781e-21 Identity = 38/97 (39.18%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 115 EKAKKDAIRKTERVSDLLVEAVNGGVQESFINQKRIELEIRALAATIARFMKQTDQWLATTHALNTALKEIGDFENWMKIMEYDCKNITTAIQNIHQ 405 EK +KDAI +++ LV+ +N GV ++++NQ++++ E++ L A+F KQT QW++ N ALKEIGD ENW + +E D + I TA++ +++ Sbjct: 21 EKRRKDAIAAATTLTEALVDHLNVGVAQAYVNQRKLDHEVKTLQTQAAQFAKQTTQWISLVENFNQALKEIGDVENWARSIEKDMRIIATALEYVYK 117
BLAST of Vigun08g132700.1 vs. DB:Swiss
Match: BL1S1_DICDI (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Dictyostelium discoideum OX=44689 GN=bloc1s1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.978e-20 Identity = 44/98 (44.90%), Postives = 60/98 (61.22%), Query Frame = 1 Query: 100 LTQRTEKAKKDAIRKTERVSDLLVEAVNGGVQESFINQKRIELEIRALAATIARFMKQTDQWLATTHALNTALKEIGDFENWMKIMEYDCKNITTAIQ 393 L + E KK+AI V++ L+++VN GV F NQK++E E R L A A+F KQT+QW+ N +LKEIGD ENW K +E D NI+ I+ Sbjct: 16 LKEENEVLKKEAIASMGVVTNGLIDSVNTGVACIFANQKKLETEARLLQANTAKFSKQTNQWIHLIENFNNSLKEIGDVENWSKKIESDMHNISDIIE 113
BLAST of Vigun08g132700.1 vs. DB:Swiss
Match: BL1S1_PONAB (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Pongo abelii OX=9601 GN=BLOC1S1 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 9.195e-20 Identity = 36/97 (37.11%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 115 EKAKKDAIRKTERVSDLLVEAVNGGVQESFINQKRIELEIRALAATIARFMKQTDQWLATTHALNTALKEIGDFENWMKIMEYDCKNITTAIQNIHQ 405 EK +++AI +++ LV+ +N GV ++++NQ++++ E++ L A+F KQT QW+ N ALKEIGD ENW + +E D + I TA++ +++ Sbjct: 49 EKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 145
BLAST of Vigun08g132700.1 vs. DB:Swiss
Match: BL1S1_HUMAN (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Homo sapiens OX=9606 GN=BLOC1S1 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 9.195e-20 Identity = 36/97 (37.11%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 115 EKAKKDAIRKTERVSDLLVEAVNGGVQESFINQKRIELEIRALAATIARFMKQTDQWLATTHALNTALKEIGDFENWMKIMEYDCKNITTAIQNIHQ 405 EK +++AI +++ LV+ +N GV ++++NQ++++ E++ L A+F KQT QW+ N ALKEIGD ENW + +E D + I TA++ +++ Sbjct: 49 EKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 145
BLAST of Vigun08g132700.1 vs. DB:Swiss
Match: BL1S1_MOUSE (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Mus musculus OX=10090 GN=Bloc1s1 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.116e-19 Identity = 36/97 (37.11%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 115 EKAKKDAIRKTERVSDLLVEAVNGGVQESFINQKRIELEIRALAATIARFMKQTDQWLATTHALNTALKEIGDFENWMKIMEYDCKNITTAIQNIHQ 405 EK +++AI +++ LV+ +N GV ++++NQ++++ E++ L A+F KQT QW+ N ALKEIGD ENW + +E D + I TA++ +++ Sbjct: 21 EKRRREAIAAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117
BLAST of Vigun08g132700.1 vs. DB:Swiss
Match: BL1S1_RAT (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Rattus norvegicus OX=10116 GN=Bloc1s1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.204e-19 Identity = 36/97 (37.11%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 115 EKAKKDAIRKTERVSDLLVEAVNGGVQESFINQKRIELEIRALAATIARFMKQTDQWLATTHALNTALKEIGDFENWMKIMEYDCKNITTAIQNIHQ 405 EK +++AI +++ LV+ +N GV ++++NQ++++ E++ L A+F KQT QW+ N ALKEIGD ENW + +E D + I TA++ +++ Sbjct: 21 EKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117
BLAST of Vigun08g132700.1 vs. DB:Swiss
Match: BL1S1_BOVIN (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Bos taurus OX=9913 GN=BLOC1S1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.204e-19 Identity = 36/97 (37.11%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 115 EKAKKDAIRKTERVSDLLVEAVNGGVQESFINQKRIELEIRALAATIARFMKQTDQWLATTHALNTALKEIGDFENWMKIMEYDCKNITTAIQNIHQ 405 EK +++AI +++ LV+ +N GV ++++NQ++++ E++ L A+F KQT QW+ N ALKEIGD ENW + +E D + I TA++ +++ Sbjct: 21 EKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117
BLAST of Vigun08g132700.1 vs. DB:Swiss
Match: BL1S1_CAEEL (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Caenorhabditis elegans OX=6239 GN=blos-1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.558e-17 Identity = 40/97 (41.24%), Postives = 59/97 (60.82%), Query Frame = 1 Query: 115 EKAKKDAIRKTERVSDLLVEAVNGGVQESFINQKRIELEIRALAATIARFMKQTDQWLATTHALNTALKEIGDFENWMKIMEYDCKNITTAIQNIHQ 405 EK K +AI + +S +V+ +N V +++ NQKR+++E + A KQT+QWL T LN ALKEIGD ENW K +E D K IT ++ ++ Sbjct: 17 EKLKNEAIVAAQTLSTAVVDHLNAKVAQAYGNQKRLDVEAKRFENNSAALAKQTEQWLFITEGLNYALKEIGDVENWSKTIENDMKIITETLRRAYE 113
BLAST of Vigun08g132700.1 vs. DB:Swiss
Match: BL1S1_DROME (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Drosophila melanogaster OX=7227 GN=Blos1 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.192e-15 Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 106 QRTEKAKKDAIRKTERVSDLLVEAVNGGVQESFINQKRIELEIRALAATIARFMKQTDQWLATTHALNTALKEIGDFENWMKIMEYDCKNITTAIQ 393 Q E +K+AI + ++ LV+ +N GV ++++NQKR++ E + L F KQT QWL +TALK++GD ENW + +E D I ++ Sbjct: 18 QEQEVRRKEAIEASNELTQSLVDTLNVGVAQAYLNQKRLDAEAKQLHLGATNFAKQTHQWLQLIDQFSTALKDLGDVENWARSIEGDMHTINQTLE 113 The following BLAST results are available for this feature:
BLAST of Vigun08g132700.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun08g132700.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g132700.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g132700.1; organism=Vigna unguiculata; type=mRNA; length=930bpback to top protein sequence of Vigun08g132700.1_Vu_IT97K-499-35_v1.1 >Vigun08g132700.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g132700.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g132700.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=137bpback to top mRNA from alignment at Vu08:30369221..30371510- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun08g132700.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g132700.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g132700.1; organism=Vigna unguiculata; type=mRNA; length=2290bp; location=Sequence derived from: Vu08:30369221..30371510- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu08:30369221..30371510- >Vigun08g132700.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g132700.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g132700.1; organism=Vigna unguiculata; type=CDS; length=411bp; location=Sequence derived from: Vu08:30369221..30371510- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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