Phvul.002G148100.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Phvul.002G148100.1 vs. DB:Swiss
Match: UBP17_ARATH (Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana OX=3702 GN=UBP17 PE=2 SV=1) HSP 1 Score: 527.709 bits (1358), Expect = 1.142e-174 Identity = 284/498 (57.03%), Postives = 342/498 (68.67%), Query Frame = 1 Query: 1033 KVSAIPNLPQNVRSGLKTSMQKVVQQFRSSKDSRSAE-----NEMGFPYELFVELYCYDKMKLFPFGLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRCQKKGWCFTCEFEYLIQKAKEGISPLSPIGILSKIHKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEASVSSPLAEETTLVGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIGTLEEALGQFTAPEILDKDNKYNCSRCKTYEKARKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLDMAPYMSGTK-DKSPLYSLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSERAYMLLYARHSPKPLGLVSSNAISSAGKFKRRNLEAIPATSKTRSNSMATSGNSHYLQQKHGKYPNWNDVEDSLSHDFVYPEEWRFQHGVRNTMVDXXXXXXXXXXXXXXXXXXXXIKDSASSADFSDYIFGEVGPNW 2508 K ++ P + Q SGLKTS+QKVVQ FR + S+ ++ +EM F YELFV+LYC D+++L PFGL N GNSCYANAVLQCLA+TRPL SYL +G HSK C+KK WCF CEFE+LI KA+ G SPLSPI ILSK+ KIG HLG G+EEDAHEFLRCAVDTMQSV LKEA + P AEETTLVG TFGGYL SKIKC+ CL KSER E MMDLTVEIDGDIG+LEEAL QFTA E+LD +N+Y C RCK+Y+KA+KKL +LE PNILT+VLKRFQS NF KL+K + FPE+LD++PYMS P+YSLYAVVVHLD M+ FSGHYVCY+K + G+WF+ DDS V PV+L VL E AYMLLYAR SP+P VS N + +RRNL AIP+ + N G+++ L + VD SS S S + + S+ S KDS+ + SDY+FG V P W Sbjct: 265 KANSKPKVSQASSSGLKTSVQKVVQHFRPPQSSKKSQPSSSIDEMSFSYELFVKLYC-DRVELQPFGLVNLGNSCYANAVLQCLAFTRPLISYLIRGLHSKTCRKKSWCFVCEFEHLILKARGGESPLSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLKEAPAAGPFAEETTLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTVEIDGDIGSLEEALAQFTAYEVLDGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDNFGKLSKPIHFPELLDISPYMSDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYIKTLDGDWFKIDDSNVFPVQLETVLLEGAYMLLYARDSPRP---VSKNGGRKSK--QRRNLAAIPS---RKGNKKQRDGDNNSLLPR----------------------------------VDWSSGSLSSMFSSSDTTSSCSTKDSSGIENLSDYLFGGVEPVW 719 HSP 2 Score: 81.2629 bits (199), Expect = 2.678e-14 Identity = 44/103 (42.72%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 49 LAFGFAVIRHVWRNAEAKREDSIMMRLPEDAGXXXXXXXXXXXXXXXXXXXXXXXXXXRWYQCAVCYAPTTMRCARCKAVRYCSGKCQISHWRQGHKDECCPP 357 + F +IR WR+A +RE+ I RL A E + V Y+CAVC PTT RC++CK+VRYCS KCQI HWR+GHK+EC P Sbjct: 1 MMLVFLLIRRQWRSASVRREEVI--RLIALATEESYLAEEVRPATVDYGGDSVSDV----YRCAVCLYPTTTRCSQCKSVRYCSSKCQILHWRRGHKEECRSP 97
BLAST of Phvul.002G148100.1 vs. DB:Swiss
Match: UBP16_ARATH (Ubiquitin carboxyl-terminal hydrolase 16 OS=Arabidopsis thaliana OX=3702 GN=UBP16 PE=1 SV=1) HSP 1 Score: 441.425 bits (1134), Expect = 3.168e-138 Identity = 226/404 (55.94%), Postives = 282/404 (69.80%), Query Frame = 1 Query: 1069 RSGLKTSMQKVVQQFRSSKDSRSAENEMG--------FPYELFVELYCYDKMKLFPFGLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRCQKKGWCFTCEFEYLIQKAKEGISPLSPIGILSKIHKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEAS---VSSPLAEETTLVGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIGTLEEALGQFTAPEILDKDNKYNCSRCKTYEKARKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLDMAPYMSGTKDKSPLYSLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSERAYMLLYARHSPKPLGLVSSNAISSAGKFKRRNLEAIPATSKTRSNSMATS 2247 RSGLK S+ KVV Q+ K +ENEM FPYE+F +LY Y K++ P GL N GNSC+AN V QCL +T PLT+Y Q FHS+ C KK CFTC FE L+ KAKE SPLSP G+LS++ IG LG+G+EEDAHEFLR VDTMQSVC+K + S E+TTL+G TFGGYLRSKIKC++C KSE E+MMDLTVEIDGDI TL++AL +FT EILD +NKY C CK+YE+A+KKL + E PN+LTI LKRFQ+G F KLNK ++FPE LD+APY+SG +KS Y LY V+VHLD+MNAAFSGHYVCY++N Q +W++ DDS V ++ R+L++ AYML YAR +P P L ++ K R L S T S S++TS Sbjct: 491 RSGLKASVLKVVDQWTRPK----SENEMAGRHGHKGLFPYEVFAKLYTY-KIEFQPCGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQCFTCGFEKLVVKAKEEKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMTKSSKLEDTTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGKFGKLNKLIRFPETLDLAPYVSGGSEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRN-QNKWYKADDSTVVTSDVERILTKGAYMLFYARCTPTPPRLAVCTKTEASNKKSRVPLPKANEKS-TISRSVSTS 887 HSP 2 Score: 84.3445 bits (207), Expect = 3.538e-15 Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 229 YQCAVCYAPTTMRCARCKAVRYCSGKCQISHWRQGHKDECCPPTTTMEINDDNIS 393 + C VCY T RC+RCKAVRYCSGKCQI HWRQGHKDEC P + + D++ S Sbjct: 72 FHCPVCYCLATTRCSRCKAVRYCSGKCQIIHWRQGHKDECHPASIVYDSEDESDS 126
BLAST of Phvul.002G148100.1 vs. DB:Swiss
Match: UBP19_ARATH (Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP19 PE=2 SV=2) HSP 1 Score: 408.297 bits (1048), Expect = 1.816e-129 Identity = 196/367 (53.41%), Postives = 251/367 (68.39%), Query Frame = 1 Query: 1069 RSGLKTSMQKVVQQFRSSKDSRSAENEMGFPYELFVELYCYDKMKLFPFGLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRCQKKGWCFTCEFEYLIQKAKEGISPLSPIGILSKIHKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKE---ASVSSPLAEETTLVGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIGTLEEALGQFTAPEILDKDNKYNCSRCKTYEKARKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLDMAPYMSGTKDKSPLYSLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSERAYMLLYARHSPKPLGLVSSNA 2160 RS K + +V Q SK + + + FPYE FV Y +D+ + P GLTNCGNSC+AN VLQCL++TRPL +YL + H + C++ WCF CEFE + +A P SP+ I+S++ IG +LG+GR+EDAHE +R A+D MQSVCL E V P A+ETTL+ Y FGG L+S+++C C S++YE MMDLTVEI GD +LEE L QFTA E L DN Y C RC Y KA K+L++ APNILTI LKRFQ G F KLNK + FPE D+ PYMSG + S +Y LYAV+VHLD++NA+F GHY+CYVK+ +G W+R DDS VE VEL VLS+RAYMLLY+R P+P L S + Sbjct: 127 RSASKKTRIALVPQQSQSKATLKPTDVL-FPYESFVRYYNWDRPIMAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLDRANYSRFPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSGGGEGSDVYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLYSRVQPRPSNLRSEES 492 HSP 2 Score: 63.929 bits (154), Expect = 5.494e-9 Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 1 Query: 232 QCAVCYAPTTMRCARCKAVRYCSGKCQISHWRQGHKDEC--CPPTTTMEINDDNISYRASVSGTESG 426 +C+VC TT +C+RCK+VRYCS CQ S W+ GHK +C T + + D+I + AS+ G S Sbjct: 63 ECSVCGKATTKKCSRCKSVRYCSAACQTSDWKSGHKLKCKGFRSTDSSPVRRDDIDFEASLFGNRSA 129
BLAST of Phvul.002G148100.1 vs. DB:Swiss
Match: UBP18_ARATH (Ubiquitin carboxyl-terminal hydrolase 18 OS=Arabidopsis thaliana OX=3702 GN=UBP18 PE=2 SV=2) HSP 1 Score: 396.356 bits (1017), Expect = 2.409e-125 Identity = 182/339 (53.69%), Postives = 237/339 (69.91%), Query Frame = 1 Query: 1114 RSSKDSRSAENEMGFPYELFVELYCYDKMKLFPFGLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRCQKKGWCFTCEFEYLIQKAKEGISPLSPIGILSKIHKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKE---ASVSSPLAEETTLVGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIGTLEEALGQFTAPEILDKDNKYNCSRCKTYEKARKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLDMAPYMSGTKDKSPLYSLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSERAYMLLYAR 2121 R S E+ FPYE FVE + +D +L P GL NCGNSC+AN +LQCL++TRPL +YL + H + C + WCF CEF+ +++A + P SP+ I+S++ IG LG+GR+EDAHEF+R A+D MQSVCL E + P ++ETTL+ Y FGG L+S+++C C S++YE MMDL VE+ GD G+LEE L QFTA E L DN Y C RC Y KA K+LT+ APNILTI LKR+Q G + KLNK + FPE LD+ PYMS D S +Y LYAV+VHLD++NA+F GHY+CY+K+ G W+R DDS +E VEL VLS+RAYMLLY+R Sbjct: 135 RGQNKSSLKPREVLFPYEEFVEYFNWDNPELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECMRNDWCFLCEFQTHVERASQSRFPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLDEFGGEKIVPPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQGGRYGKLNKRISFPETLDLNPYMSEGGDGSDVYKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVLSQRAYMLLYSR 473
BLAST of Phvul.002G148100.1 vs. DB:Swiss
Match: UBP15_ARATH (Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP15 PE=1 SV=2) HSP 1 Score: 389.808 bits (1000), Expect = 1.233e-119 Identity = 183/340 (53.82%), Postives = 236/340 (69.41%), Query Frame = 1 Query: 1126 DSRSAENEMGFPYELFVELYCYDKMKLFPFGLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRCQKKGWCFTCEFEYLIQKAKEGISPLSPIGILSKIHKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEASVSS---PLAEETTLVGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIGTLEEALGQFTAPEILDKDNKYNCSRCKTYEKARKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLDMAPYMSGTKDKSPLYSLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSERAYMLLYARHSPKP 2136 D R +M FPYE F++ + + L P GL NCGNSCYANAVLQ L T+PL +YL + HS+ C K WC CE E + +E PLS ILS + I +G G +EDAHEFLR V +MQS+CL+ + P +ETTLV + FGG LRSK+KCLRC +SERYE +MDLT+EI G + +L++AL QFT PE LD +N Y CSRC Y +ARK+L++ EAPNILTIVLKRFQ G + K+NK + FPE+LDM P+M+ T D PLY LYAV+VHLD +NA+FSGHY+ YVK+++G W+R DDS + PV +++V+SE AYML Y R P+P Sbjct: 409 DDRYKNLKMLFPYEEFLKFFQCEVFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHVMMLRESGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLFYMRSYPRP 748 HSP 2 Score: 75.0998 bits (183), Expect = 2.353e-12 Identity = 28/40 (70.00%), Postives = 31/40 (77.50%), Query Frame = 1 Query: 235 CAVCYAPTTMRCARCKAVRYCSGKCQISHWRQGHKDECCP 354 CA C+ P RC+RCK+VRYCSGKCQI HWR HKDEC P Sbjct: 130 CARCFGPAKTRCSRCKSVRYCSGKCQIIHWRVAHKDECVP 169
BLAST of Phvul.002G148100.1 vs. DB:Swiss
Match: UBP42_RAT (Ubiquitin carboxyl-terminal hydrolase 42 OS=Rattus norvegicus OX=10116 GN=Usp42 PE=1 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.091e-69 Identity = 125/303 (41.25%), Postives = 183/303 (60.40%), Query Frame = 1 Query: 1216 GLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRCQKKGWCFTCEFE-YLIQKAKEGISPLSPIGILSKIHKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEASVSSPLAEETTLVGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIGTLEEALGQFTAPEILDKDNKYNCSRCKTYEKARKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLDMAPYMSGTKDKSPLYSLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSERAYMLLYAR 2121 GL N GN+C+ANA LQCL YT PL +Y+ HSK C +G+C C + ++ Q + P+ +++++ +I H G +EDAHEFL+ VD MQ CL ++ + TTLV FGGYLRS++KCL C G S+ ++ +D+T+EI ++ +AL QF PE LD +N Y CS+CK A K+ T+ + N+LTI LKRF + K+ K V++PE LD+ PYMS + +Y LYAV+VH +GHY CY+K G W++ +DS V ++ VL+++AY+L Y R Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVTKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLVHTGF--NCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVLFYIR 410
BLAST of Phvul.002G148100.1 vs. DB:Swiss
Match: UBP42_MOUSE (Ubiquitin carboxyl-terminal hydrolase 42 OS=Mus musculus OX=10090 GN=Usp42 PE=1 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 3.729e-69 Identity = 130/326 (39.88%), Postives = 191/326 (58.59%), Query Frame = 1 Query: 1216 GLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRCQKKGWCFTCEFE-YLIQKAKEGISPLSPIGILSKIHKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEASVSSPLAEETTLVGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIGTLEEALGQFTAPEILDKDNKYNCSRCKTYEKARKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLDMAPYMSGTKDKSPLYSLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSERAYMLLYARHSPKPLGLVSSNAISSAGKFKRR 2190 GL N GN+C+ANA LQCL YT PL +Y+ HSK C +G+C C + ++ Q + P+ +++++ +I H G +EDAHEFL+ VD MQ CL ++ + TTLV FGGYLRS++KCL C G S+ ++ +D+T+EI ++ +AL QF PE LD +N Y CS+CK A K+ T+ + N+LTI LKRF + K+ K V++PE LD+ PYMS + +Y LYAV+VH +GHY CY+K G W++ +DS V ++ VL+++AY+L Y R G S++ S G+ R Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVTKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLVHTGF--NCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRAVLNQQAYVLFYIRSHDVKNGGESAHPAHSPGQSSPR 433
BLAST of Phvul.002G148100.1 vs. DB:Swiss
Match: UBP42_BOVIN (Ubiquitin carboxyl-terminal hydrolase 42 OS=Bos taurus OX=9913 GN=USP42 PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.547e-69 Identity = 125/303 (41.25%), Postives = 183/303 (60.40%), Query Frame = 1 Query: 1216 GLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRCQKKGWCFTCEFE-YLIQKAKEGISPLSPIGILSKIHKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEASVSSPLAEETTLVGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIGTLEEALGQFTAPEILDKDNKYNCSRCKTYEKARKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLDMAPYMSGTKDKSPLYSLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSERAYMLLYAR 2121 GL N GN+C+ANA LQCL YT PL +Y+ HSK C +G+C C + ++ Q + P+ +++++ +I H G +EDAHEFL+ VD MQ CL ++ + TTLV FGGYLRS++KCL C G S+ ++ +D+T+EI ++ +AL QF PE LD +N Y CS+CK A K+ T+ + N+LT+ LKRF + K+ K V++PE LD+ PYMS + +Y LYAV+VH +GHY CY+K G W++ +DS V ++ VLS++AY+L Y R Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLVHTGFN--CHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIR 411
BLAST of Phvul.002G148100.1 vs. DB:Swiss
Match: UBP42_HUMAN (Ubiquitin carboxyl-terminal hydrolase 42 OS=Homo sapiens OX=9606 GN=USP42 PE=1 SV=3) HSP 1 Score: 254.218 bits (648), Expect = 6.851e-69 Identity = 125/303 (41.25%), Postives = 183/303 (60.40%), Query Frame = 1 Query: 1216 GLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRCQKKGWCFTCEFE-YLIQKAKEGISPLSPIGILSKIHKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEASVSSPLAEETTLVGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIGTLEEALGQFTAPEILDKDNKYNCSRCKTYEKARKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLDMAPYMSGTKDKSPLYSLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSERAYMLLYAR 2121 GL N GN+C+ANA LQCL YT PL +Y+ HSK C +G+C C + ++ Q + P+ +++++ +I H G +EDAHEFL+ VD MQ CL ++ + TTLV FGGYLRS++KCL C G S+ ++ +D+T+EI ++ +AL QF PE LD +N Y CS+CK A K+ T+ + N+LT+ LKRF + K+ K V++PE LD+ PYMS + +Y LYAV+VH +GHY CY+K G W++ +DS V ++ VLS++AY+L Y R Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIVYVLYAVLVHTGFN--CHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIR 411
BLAST of Phvul.002G148100.1 vs. DB:Swiss
Match: UL17C_HUMAN (Ubiquitin carboxyl-terminal hydrolase 17-like protein 12 OS=Homo sapiens OX=9606 GN=USP17L12 PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 7.764e-68 Identity = 140/406 (34.48%), Postives = 220/406 (54.19%), Query Frame = 1 Query: 1216 GLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRCQKKGWCFTCEFEYLIQKAKEGISPLSPIGILSKIHKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEASVSSPLAEETTLVGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIGTLEEALGQFTAPEILDKDNKYNCSRCKTYEKARKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLDMAPYMSGTKDKSPLYSLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSERAYMLLYA------RHS--------PKPLGLVSSNAISSAGKFKRRN--LEAIPATSK---TRSNSMATSGNSHYLQQKHGKYPNWN--DVEDSLSHDFVYPEEWRFQHGVRN 2370 GL N GN+CY NA LQCL YT PL +Y+ HS+ C + C C + I +A +P ++ + + G++EDAHEFL VD M+ CL +++TTL+ FGGY RS+IKCL C G S+ ++ +D+ ++I ++++AL Q PE L+ +N Y+C C A K LT+L + +L +VLKRF K+ K+VQ+PE LDM PYMS +Y LYAV+VH + +GHY YVK +G+W++ DD+ V ++ VLS++AY+L Y RHS P+ LG ++ ++ G+ KR + L+A P + R+ +T + +LQ+++ P +N VE +L D + + +++ G++N Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALH-----NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGW--SCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQA-PELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKN 477 The following BLAST results are available for this feature:
BLAST of Phvul.002G148100.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.002G148100.1_Pv_G19833_v2.1 >Phvul.002G148100.1_Pv_G19833_v2.1 ID=Phvul.002G148100.1_Pv_G19833_v2.1; Name=Phvul.002G148100.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=926bpback to top mRNA from alignment at Chr02:29888604..29897145- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.002G148100.1_Pv_G19833_v2.1 ID=Phvul.002G148100.1_Pv_G19833_v2.1; Name=Phvul.002G148100.1; organism=Phaseolus vulgaris; type=mRNA; length=8542bp; location=Sequence derived from: Chr02:29888604..29897145- (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr02:29888604..29897145- >Phvul.002G148100.1_Pv_G19833_v2.1 ID=Phvul.002G148100.1_Pv_G19833_v2.1; Name=Phvul.002G148100.1; organism=Phaseolus vulgaris; type=CDS; length=2778bp; location=Sequence derived from: Chr02:29888604..29897145- (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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