rna-TanjilR_16801
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_16801 vs. DB:Swiss
Match: SEC23_USTMA (Protein transport protein SEC23 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=SEC23 PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.360e-54 Identity = 107/258 (41.47%), Postives = 154/258 (59.69%), Query Frame = 1
Query: 25 DPEGLDGVRMTWNVWPRSKLESSKCVIPLAATISLIKPHPHIPRLPYAPLRCKT-CSSVLNPFSRVDFTAKIWICPFCYQRNHFPPHYNAVSETNLPGELYPHYTTVEYVNPIPDSNSNPFNQFRSKFTSPVFLFVLDTCMIEEEMEFVKSALRRAIGLLPDNALVGFVSFGTQVQVHELGFSDMSKVYVFRGSKDIPKEQVLEQLGLGSGYQKGRVQXXXXXXXXXXFP----GTA---ITRFLLPSSDCEYTLNAV 774
D E DGVR++WNVWP SK+E+++ V+P++A + +K +P + Y P+ CK C +VLNP+ ++D K+WICPFC RN FPPHY +S TNLP EL P YTT+EY P P+FL+V+DTCM +++++ ++ AL ++ LLP NALVG +++GT QVHELG+ K YVFRG+K+ + + + LGL G + G + P TA +RFLLP S CE+ L +
Sbjct: 5 DVEDRDGVRLSWNVWPSSKIEATRTVVPISALYTPLKEREDLPPVLYEPVTCKPPCRAVLNPYCQIDVRGKLWICPFCLSRNAFPPHYKDISSTNLPAELLPKYTTIEYTLSRPAQ------------IPPIFLYVVDTCMDDDDLKALREALVVSLSLLPPNALVGLITYGTMAQVHELGYDACPKSYVFRGTKEYAPKAIQDMLGLNPGARPMGAGAPGAPGGPSQAPRPPNATAQMGASRFLLPVSQCEFQLTQI 250 HSP 2 Score: 122.865 bits (307), Expect = 2.686e-46 Identity = 52/91 (57.14%), Postives = 71/91 (78.02%), Query Frame = 1
Query: 6118 FWQVFNNSPDETAYFRMMLNRENISNAAVMIQPSLISYSFNSPPAPALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEHQ 6390
F QVFNNSPDETA++R +LN E+++N+ +MIQP+L+SY F PP P LLD SI D +LLLD++F ++IFHG T+AQWR GYQ+Q ++
Sbjct: 594 FLQVFNNSPDETAFYRHVLNTEDVNNSLIMIQPTLMSYGFEGPPQPVLLDSVSIRPDVVLLLDTFFHILIFHGETVAQWRKAGYQDQEGYE 684 HSP 3 Score: 88.1965 bits (217), Expect = 2.686e-46 Identity = 39/52 (75.00%), Postives = 45/52 (86.54%), Query Frame = 3
Query: 5883 DATRWLDRLLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFLQV 6038
D RWLDR+LIRLC KF DYRKDDP+SF L +FS++PQFMF+LRRSQFLQV
Sbjct: 546 DVLRWLDRMLIRLCQKFADYRKDDPTSFRLGENFSIYPQFMFHLRRSQFLQV 597 HSP 4 Score: 73.1738 bits (178), Expect = 2.804e-11 Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 2998 PMQIVSKDLSDPVRSHKDLDKDVAPYFKKAVKFYESLAKQLVSQGHVLDLFASALDQV 3171
P +VS +L + +RSH D+DKD A Y+K+A+KFYE++AK+ GH +D+FA LDQV
Sbjct: 305 PGMVVSTELRERIRSHHDIDKDNAKYYKRAIKFYEAMAKRAAGNGHTIDVFAGCLDQV 362 HSP 5 Score: 65.0846 bits (157), Expect = 7.954e-9 Identity = 30/51 (58.82%), Postives = 35/51 (68.63%), Query Frame = 3
Query: 2178 WPVPPGSRPARCTGVALSVAMGLLGACNPGTGARIIALVGGPCTEGPGTVI 2330
WPV R RCTGVALSVA+G+L P TGAR++ GGP TEGPG V+
Sbjct: 259 WPVANDKRSQRCTGVALSVAVGMLETTFPNTGARVMLFCGGPATEGPGMVV 309 HSP 6 Score: 59.3066 bits (142), Expect = 4.674e-7 Identity = 31/50 (62.00%), Postives = 36/50 (72.00%), Query Frame = 2
Query: 6926 QARFLLAKLNPSATYNSAHEMTAGSD---VIFTDDVSLQVFFEHLQRLAV 7066
QARFLL+KLNPS T+ S + + IFTDDVSLQVF EHL+RLAV
Sbjct: 719 QARFLLSKLNPSTTHMSGGMYGSSGNSGAAIFTDDVSLQVFMEHLKRLAV 768
BLAST of rna-TanjilR_16801 vs. DB:Swiss
Match: SC231_SCHPO (Protein transport protein sec23-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sec231 PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.517e-53 Identity = 109/256 (42.58%), Postives = 151/256 (58.98%), Query Frame = 1
Query: 31 EGLDGVRMTWNVWPRSKLESSKCVIPLAATISLIKPHPHIPRLPYAPLRCKT-CSSVLNPFSRVDFTAKIWICPFCYQRNHFPPHYNAVSETNLPGELYPHYTTVEYVNPIPDSNSNPFNQFRSKFTSPVFLFVLDTCMIEEEMEFVKSALRRAIGLLPDNALVGFVSFGTQVQVHELGFSDMSKVYVFRGSKDIPKEQVLEQLGLGS------GYQKGRVQXXXXXXXXXXFPGTAI-TRFLLPSSDCEYTLNAV 774
E DGVR TWNV+P +++ESS+ ++P+A+ + P +P + Y P+ CK C +VLNP+ +D AK WICPFC QRN PP Y +S T+LP EL P Y+T+EY P P +PVFLFV+D C EE ++ +K +L ++ LLP LVG V+FGT V V+ELG+++ SK YVFRGSKD +Q+ E LGL + Q+ R +F G+A +RFLLP CE+ L +
Sbjct: 7 EERDGVRFTWNVFPSTRIESSRTIVPIASIYKPLNERPDLPPVLYEPVTCKAPCKAVLNPYCHIDTRAKFWICPFCLQRNMLPPQYKDISNTSLPIELLPEYSTIEYTLPRPPQ------------LTPVFLFVVDVCQDEENLQALKDSLIISLSLLPPECLVGLVTFGTMVDVYELGYTECSKSYVFRGSKDYTSKQIQEMLGLPTSNVSPVALQQAR-----------SFQGSAAPSRFLLPIQQCEFQLTNI 239 HSP 2 Score: 127.487 bits (319), Expect = 8.974e-45 Identity = 58/92 (63.04%), Postives = 73/92 (79.35%), Query Frame = 1
Query: 6118 FWQVFNNSPDETAYFRMMLNRENISNAAVMIQPSLISYSFNSPPA-PALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEHQ 6390
F QVFNNSPDETA++R MLN E+++N+ +MIQP+L S+SF P P LLD S+ D ILLLD++F ++IFHG TIAQWRN GYQNQPE+Q
Sbjct: 583 FLQVFNNSPDETAFYRHMLNHEDVNNSLIMIQPTLQSFSFEHPGGVPVLLDAVSVKPDVILLLDTFFHILIFHGDTIAQWRNAGYQNQPEYQ 674 HSP 3 Score: 78.5666 bits (192), Expect = 8.974e-45 Identity = 35/52 (67.31%), Postives = 42/52 (80.77%), Query Frame = 3
Query: 5883 DATRWLDRLLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFLQV 6038
D RW DR+LI+LC KF +YRKDDPSSF L+ F+L+PQFM+ LRRS FLQV
Sbjct: 535 DVLRWTDRMLIKLCQKFAEYRKDDPSSFRLSSQFTLYPQFMYYLRRSPFLQV 586 HSP 4 Score: 66.6254 bits (161), Expect = 2.844e-9 Identity = 26/58 (44.83%), Postives = 42/58 (72.41%), Query Frame = 1
Query: 2998 PMQIVSKDLSDPVRSHKDLDKDVAPYFKKAVKFYESLAKQLVSQGHVLDLFASALDQV 3171
P +VS +L +P+RSH D+++D A + KKA++FYE L K++ + GH +D+ A LDQ+
Sbjct: 294 PGTVVSTELREPIRSHHDIERDQAKHVKKALRFYEGLTKRVSANGHAVDILAGCLDQI 351
BLAST of rna-TanjilR_16801 vs. DB:Swiss
Match: SC23A_DANRE (Protein transport protein Sec23A OS=Danio rerio OX=7955 GN=sec23a PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 3.598e-53 Identity = 99/217 (45.62%), Postives = 141/217 (64.98%), Query Frame = 1
Query: 31 EGLDGVRMTWNVWPRSKLESSKCVIPLAATISLIKPHPHIPRLPYAPLRCK--TCSSVLNPFSRVDFTAKIWICPFCYQRNHFPPHYNAVSETNLPGELYPHYTTVEYVNPIPDSNSNPFNQFRSKFTSPVFLFVLDTCMIEEEMEFVKSALRRAIGLLPDNALVGFVSFGTQVQVHELGFSDMSKVYVFRGSKDIPKEQVLEQLGLG--SGYQKGR 669
E DGVR +WNVWP S+LE+++ V+P+A+ + +K P +P + Y P+ C TC +VLNP +VD+ AK+W C FCYQRN FPP Y +SE N P EL P ++T+EYV + P N FL+V+DTCM +++++ +K +L+ ++ LLP ALVG ++FG VQVHELG +SK YVFRG+KD+ +Q+ E LGL + Q GR
Sbjct: 12 EDRDGVRFSWNVWPSSRLEATRMVVPVASLFTPLKERPDLPPIQYEPVLCSRATCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPTYAGISEVNQPAELLPQFSTIEYV--VQRGPQMPLN----------FLYVVDTCMEDDDLQALKESLQMSLSLLPPTALVGLITFGRMVQVHELGCEGISKSYVFRGTKDLNAKQLQEMLGLTKPAAAQAGR 216 HSP 2 Score: 119.013 bits (297), Expect = 1.299e-43 Identity = 48/91 (52.75%), Postives = 70/91 (76.92%), Query Frame = 1
Query: 6118 FWQVFNNSPDETAYFRMMLNRENISNAAVMIQPSLISYSFNSPPAPALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEHQ 6390
F QVFNNSPDE+ Y+R R++++ + +M+QP L +YSFN PP P LLD +SI DRILL+D++F ++I+HG T++QWR GYQ+ PE++
Sbjct: 589 FLQVFNNSPDESTYYRHQFMRQDLTQSLIMVQPILYAYSFNGPPEPVLLDSSSILPDRILLMDTFFQILIYHGETVSQWRKAGYQDMPEYE 679 HSP 3 Score: 83.1889 bits (204), Expect = 1.299e-43 Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 3
Query: 5871 QETFDATRWLDRLLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFLQV 6038
+E D RWLDR LIRLC KFGDY K+DP+SF + +FSL+PQFMF+LRRS FLQV
Sbjct: 537 EEGPDVLRWLDRQLIRLCQKFGDYHKEDPNSFRFSETFSLYPQFMFHLRRSPFLQV 592 HSP 4 Score: 67.0106 bits (162), Expect = 1.883e-9 Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 3
Query: 2178 WPVPPGSRPARCTGVALSVAMGLLGACNPGTGARIIALVGGPCTEGPGTVI 2330
WPV G RP R GVALS+A+GLL P TGARI+A +GGP T+GPG V+
Sbjct: 252 WPVTQGKRPLRSLGVALSIAVGLLECTFPNTGARIMAFIGGPATQGPGMVV 302 HSP 5 Score: 62.3882 bits (150), Expect = 5.867e-8 Identity = 26/58 (44.83%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 2998 PMQIVSKDLSDPVRSHKDLDKDVAPYFKKAVKFYESLAKQLVSQGHVLDLFASALDQV 3171
P +V +L P+RS D++KD A + KKA K YE+LA + + GH++D++A ALDQ
Sbjct: 298 PGMVVGDELKTPIRSWHDIEKDNAKFMKKATKHYEALANRAAANGHIIDIYACALDQT 355
BLAST of rna-TanjilR_16801 vs. DB:Swiss
Match: SEC23_PHANO (Protein transport protein SEC23 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=SEC23 PE=3 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 4.977e-53 Identity = 103/252 (40.87%), Postives = 150/252 (59.52%), Query Frame = 1
Query: 22 TDPEGLDGVRMTWNVWPRSKLESSKCVIPLAATISLIKPHPHIPRLPYAPLRCKT-CSSVLNPFSRVDFTAKIWICPFCYQRNHFPPHYNAVSETNLPGELYPHYTTVEYVNPIPDSNSNPFNQFRSKFTSPVFLFVLDTCMIEEEMEFVKSALRRAIGLLPDNALVGFVSFGTQVQVHELGFSDMSKVYVFRGSKDIPKEQVLEQLGLGSGYQKGRVQXXXXXXXXXXFPGTAITRFLLPSSDCEYTLNAV 774
+D E DGVR++WN +P S++E+S+ V+P+ A + +K P L Y P+ C+ C VLNP+ +VD A++WICPFC RN PPHY +S+ +P EL+P TT+EY P P +P+F+FV+DTC E+ ++ +K ++ ++ LLP ALVG +++GT QVHELG+++ +K YVFRG+KD +QV +GLG R A G P TA RF+LP CE+ L V
Sbjct: 12 SDVEDRDGVRLSWNTFPSSRMEASRLVVPIGALYTPLKEKTDTPLLQYEPVVCRAPCKGVLNPYCQVDMRARVWICPFCLNRNQLPPHYKDISQEQIPPELHPSSTTIEYRLPKPAR------------CAPIFIFVIDTCQEEDSLKALKDSIIMSLSLLPAYALVGLITYGTMTQVHELGYTECAKSYVFRGNKDYSTKQVQTMIGLGQ-MAAPRPGMQAQPGQPGGAPPTAAMRFILPVGQCEFQLTNV 250 HSP 2 Score: 112.079 bits (279), Expect = 1.172e-42 Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = 1
Query: 6118 FWQVFNNSPDETAYFRMMLNRENISNAAVMIQPSLISYSFNSPPA-PALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEHQ 6390
F QVFNNSPDETA++R +LN E++ N+ VMIQP+L SY F+ P LLD ASI ++ +LLLD++F ++IFHG T+A+WR GYQ+Q ++
Sbjct: 598 FLQVFNNSPDETAFYRHVLNHEDVGNSLVMIQPTLDSYGFDHEGGQPVLLDSASIQSETVLLLDTFFHILIFHGETMAEWRKAGYQDQEGYE 689 HSP 3 Score: 86.6557 bits (213), Expect = 1.172e-42 Identity = 38/52 (73.08%), Postives = 46/52 (88.46%), Query Frame = 3
Query: 5883 DATRWLDRLLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFLQV 6038
D RW+DR+LIRLCS+F +YRKDDPSSF L +F+L+PQFMF+LRRSQFLQV
Sbjct: 550 DVLRWVDRMLIRLCSRFAEYRKDDPSSFRLEKNFTLYPQFMFHLRRSQFLQV 601 HSP 4 Score: 75.485 bits (184), Expect = 5.050e-12 Identity = 30/58 (51.72%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 2998 PMQIVSKDLSDPVRSHKDLDKDVAPYFKKAVKFYESLAKQLVSQGHVLDLFASALDQV 3171
P +V +L +P+RSH D+D+D Y+KKA+KFYE+LAK++ + GH++D+FA LDQV
Sbjct: 306 PGMVVGPELREPIRSHHDIDRDNIKYYKKALKFYETLAKRVSTNGHIVDIFAGCLDQV 363 HSP 5 Score: 63.5438 bits (153), Expect = 2.615e-8 Identity = 33/52 (63.46%), Postives = 35/52 (67.31%), Query Frame = 3
Query: 2178 WPVPPGSRPARCTGVALSVAMGLLGACN-PGTGARIIALVGGPCTEGPGTVI 2330
WPV R RCTGVALSVA GLL A N TGARI+ GGP TEGPG V+
Sbjct: 259 WPVANDKRALRCTGVALSVASGLLEASNFVNTGARIMLFAGGPATEGPGMVV 310
BLAST of rna-TanjilR_16801 vs. DB:Swiss
Match: SEC23_ASPNC (Protein transport protein sec23 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=sec23 PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 5.147e-53 Identity = 104/254 (40.94%), Postives = 152/254 (59.84%), Query Frame = 1
Query: 22 TDPEGLDGVRMTWNVWPRSKLESSKCVIPLAATISLIKPHPHIPRLPYAPLRCKT-CSSVLNPFSRVDFTAKIWICPFCYQRNHFPPHYNAVSETNLPGELYPHYTTVEY--VNPIPDSNSNPFNQFRSKFTSPVFLFVLDTCMIEEEMEFVKSALRRAIGLLPDNALVGFVSFGTQVQVHELGFSDMSKVYVFRGSKDIPKEQVLEQLGLGSGYQKGRVQXXXXXXXXXXFPGTAITRFLLPSSDCEYTLNAV 774
+D E DG+R++WN +P S++E+S+ V+P+ A + +K P P L Y P+ CK C +VLNP++ VD A+IWICPFC RN PPHY ++E+ +P EL+P TT+EY P P P+F++V+DTC ++ ++ +K +L ++ LLP NALVG +++GT QVHELG+++ +K YVFRGSK+ +QV E LGL SG + Q A P RFLLP E+ + V
Sbjct: 11 SDVEDRDGIRLSWNTFPSSRMEASRLVVPIGAVYTPLKEKPDSPLLQYEPVTCKAPCRAVLNPYANVDVRARIWICPFCLMRNPLPPHYKDITESTIPPELHPMSTTIEYQLARPAP--------------APPIFVYVVDTCQDDDSLKALKDSLIMSLSLLPVNALVGLITYGTMAQVHELGYTECAKSYVFRGSKEYAAKQVQEMLGLASGLRPNMPQQPARP------PLGPAARFLLPVQQAEFQITNV 244 HSP 2 Score: 108.227 bits (269), Expect = 1.425e-41 Identity = 51/92 (55.43%), Postives = 68/92 (73.91%), Query Frame = 1
Query: 6118 FWQVFNNSPDETAYFRMMLNRENISNAAVMIQPSLISYSFNSPPA-PALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEHQ 6390
F QVFNNSPDETA++R +LN E++ ++ VMIQP+L SYS + P LLD ASI ILLLD++F ++IFHG TIA+WR GYQ+Q ++
Sbjct: 591 FLQVFNNSPDETAFYRHVLNHEDVGDSLVMIQPTLDSYSLEHEGSQPVLLDSASIQPAHILLLDTFFHILIFHGETIAEWRKAGYQDQEGYE 682 HSP 3 Score: 87.0409 bits (214), Expect = 1.425e-41 Identity = 38/52 (73.08%), Postives = 46/52 (88.46%), Query Frame = 3
Query: 5883 DATRWLDRLLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFLQV 6038
D RW+DR+LIRLCS+F DYRKDDP+SF L +F+L+PQFMF+LRRSQFLQV
Sbjct: 543 DVLRWVDRMLIRLCSRFADYRKDDPTSFRLEKNFTLYPQFMFHLRRSQFLQV 594 HSP 4 Score: 72.4034 bits (176), Expect = 4.381e-11 Identity = 29/58 (50.00%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 2998 PMQIVSKDLSDPVRSHKDLDKDVAPYFKKAVKFYESLAKQLVSQGHVLDLFASALDQV 3171
P +V +L +P+RSH D+D+D Y+KKAVKFY+++AK+ + GH++D+FA LDQV
Sbjct: 299 PGHVVGPELKEPIRSHHDIDRDNIKYYKKAVKFYDNMAKRAANNGHIVDVFAGCLDQV 356 HSP 5 Score: 62.003 bits (149), Expect = 6.451e-8 Identity = 29/51 (56.86%), Postives = 32/51 (62.75%), Query Frame = 3
Query: 2178 WPVPPGSRPARCTGVALSVAMGLLGACNPGTGARIIALVGGPCTEGPGTVI 2330
WPV RP RCTGVALSVA+GLL G RI+ GP TEGPG V+
Sbjct: 253 WPVANDKRPLRCTGVALSVAVGLLETSFQNAGGRIMVFTSGPATEGPGHVV 303
BLAST of rna-TanjilR_16801 vs. DB:Swiss
Match: SC23A_HUMAN (Protein transport protein Sec23A OS=Homo sapiens OX=9606 GN=SEC23A PE=1 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 8.316e-53 Identity = 95/207 (45.89%), Postives = 136/207 (65.70%), Query Frame = 1
Query: 31 EGLDGVRMTWNVWPRSKLESSKCVIPLAATISLIKPHPHIPRLPYAPLRCK--TCSSVLNPFSRVDFTAKIWICPFCYQRNHFPPHYNAVSETNLPGELYPHYTTVEYVNPIPDSNSNPFNQFRSKFTSPVFLFVLDTCMIEEEMEFVKSALRRAIGLLPDNALVGFVSFGTQVQVHELGFSDMSKVYVFRGSKDIPKEQVLEQLGL 645
E DGVR +WNVWP S+LE+++ V+P+AA + +K P +P + Y P+ C TC +VLNP +VD+ AK+W C FCYQRN FPP Y +SE N P EL P ++++EYV R +FL+V+DTCM +E+++ +K +++ ++ LLP ALVG ++FG VQVHELG +SK YVFRG+KD+ +Q+ E LGL
Sbjct: 12 EERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLCSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPSYAGISELNQPAELLPQFSSIEYVV------------LRGPQMPLIFLYVVDTCMEDEDLQALKESMQMSLSLLPPTALVGLITFGRMVQVHELGCEGISKSYVFRGTKDLSAKQLQEMLGL 206 HSP 2 Score: 119.783 bits (299), Expect = 1.217e-25 Identity = 61/125 (48.80%), Postives = 85/125 (68.00%), Query Frame = 1
Query: 6016 DDHSFYRYPLLWFSSYPTFSNLFT*LCGMCGGKMFWQVFNNSPDETAYFRMMLNRENISNAAVMIQPSLISYSFNSPPAPALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEHQ 6390
DD S +R+ FS YP F +F F QVFNNSPDE++Y+R R++++ + +MIQP L +YSF+ PP P LLD +SI ADRILL+D++F ++I+HG TIAQWR GYQ+ PE++
Sbjct: 563 DDPSSFRFSET-FSLYPQF--MF-----HLRRSSFLQVFNNSPDESSYYRHHFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILADRILLMDTFFQILIYHGETIAQWRKSGYQDMPEYE 679 HSP 3 Score: 84.7297 bits (208), Expect = 7.056e-15 Identity = 39/56 (69.64%), Postives = 45/56 (80.36%), Query Frame = 3
Query: 5871 QETFDATRWLDRLLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFLQV 6038
+E D RWLDR LIRLC KFG+Y KDDPSSF + +FSL+PQFMF+LRRS FLQV
Sbjct: 537 EEGPDVLRWLDRQLIRLCQKFGEYHKDDPSSFRFSETFSLYPQFMFHLRRSSFLQV 592 HSP 4 Score: 69.3218 bits (168), Expect = 4.082e-10 Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 3
Query: 2178 WPVPPGSRPARCTGVALSVAMGLLGACNPGTGARIIALVGGPCTEGPGTVI 2330
WPVP G RP R +GVALS+A+GLL P TGARI+ +GGP T+GPG V+
Sbjct: 252 WPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGMVV 302 HSP 5 Score: 62.7734 bits (151), Expect = 4.286e-8 Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 1
Query: 2998 PMQIVSKDLSDPVRSHKDLDKDVAPYFKKAVKFYESLAKQLVSQGHVLDLFASALDQV------CANILIFSYL 3201
P +V +L P+RS D+DKD A Y KK K +E+LA + + GHV+D++A ALDQ C L Y+
Sbjct: 298 PGMVVGDELKTPIRSWHDIDKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEMKCCPNLTGGYM 371
BLAST of rna-TanjilR_16801 vs. DB:Swiss
Match: SEC23_MAGO7 (Protein transport protein SEC23 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=SEC23 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 1.026e-52 Identity = 104/251 (41.43%), Postives = 154/251 (61.35%), Query Frame = 1
Query: 22 TDPEGLDGVRMTWNVWPRSKLESSKCVIPLAATISLIKPHPHIPRLPYAPLRCKT-CSSVLNPFSRVDFTAKIWICPFCYQRNHFPPHYNAVSETNLPGELYPHYTTVEY--VNPIPDSNSNPFNQFRSKFTSPVFLFVLDTCMIEEEMEFVKSALRRAIGLLPDNALVGFVSFGTQVQVHELGFSDMSKVYVFRGSKDIPKEQVLEQLGLGSGYQKGRVQXXXXXXXXXXFPGTAITRFLLPSSDCEYTL 765
++ E DGVR++WNV+P +++E+S+ V+P+ A + +K P P L + P+ CK C SVLNPF +VD A++WICPFC RN PPHY ++ +P EL+P TT+EY P P + P+FL+V+DTC ++ + +K +L ++ LLP+NALVG +++GT QVHE+G+++ +K YVFRGSKD +QV E LGLG + V+ G P +RFL+P S CE+ L
Sbjct: 11 SEVEDRDGVRLSWNVFPSTRMEASRLVVPIGALYTPLKEKPDTPLLQFEPVTCKQPCRSVLNPFCQVDVRARLWICPFCLSRNPLPPHYKDITANAIPPELHPSNTTIEYRLSRPAP--------------SPPIFLYVVDTCQEDDSLNALKESLVMSLSLLPENALVGLITYGTMTQVHEIGYTECAKSYVFRGSKDYAPKQVQEMLGLG----QMPVRPGMQPQPGRPMPMGPASRFLMPVSQCEFQL 243 HSP 2 Score: 112.464 bits (280), Expect = 2.468e-42 Identity = 51/92 (55.43%), Postives = 70/92 (76.09%), Query Frame = 1
Query: 6118 FWQVFNNSPDETAYFRMMLNRENISNAAVMIQPSLISYSFNSPPA-PALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEHQ 6390
F QVFNNSPDETA++R +LN E++SN+ +MIQP+L +Y+F+ P LLD ASI ILLLD++F ++IFHG TIAQW+ GYQ+Q ++
Sbjct: 591 FLQVFNNSPDETAFYRHVLNHEDVSNSLIMIQPTLDTYTFDQEGGQPVLLDSASIQPTHILLLDTFFHILIFHGETIAQWKKAGYQDQEGYE 682 HSP 3 Score: 85.5001 bits (210), Expect = 2.468e-42 Identity = 38/52 (73.08%), Postives = 45/52 (86.54%), Query Frame = 3
Query: 5883 DATRWLDRLLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFLQV 6038
D RW+DR+LI LCS+F DYRKDDPSSF L +F+L+PQFMF+LRRSQFLQV
Sbjct: 543 DVLRWVDRMLISLCSRFADYRKDDPSSFRLEKNFTLYPQFMFHLRRSQFLQV 594 HSP 4 Score: 73.1738 bits (178), Expect = 2.421e-11 Identity = 30/58 (51.72%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 2998 PMQIVSKDLSDPVRSHKDLDKDVAPYFKKAVKFYESLAKQLVSQGHVLDLFASALDQV 3171
P +VS +L +P+RSH D+D+D Y+KKA+KFY++LAK+ GH++D+FA LDQV
Sbjct: 301 PGMVVSSELREPMRSHHDIDRDNIKYYKKALKFYDTLAKRTAHNGHIIDIFAGCLDQV 358 HSP 5 Score: 62.3882 bits (150), Expect = 5.591e-8 Identity = 29/51 (56.86%), Postives = 34/51 (66.67%), Query Frame = 3
Query: 2178 WPVPPGSRPARCTGVALSVAMGLLGACNPGTGARIIALVGGPCTEGPGTVI 2330
WPV RP RCTGVALSVA+GLL + +G RI+ GP TEGPG V+
Sbjct: 255 WPVANDRRPLRCTGVALSVAVGLLESSFQNSGGRIMLFAAGPATEGPGMVV 305
BLAST of rna-TanjilR_16801 vs. DB:Swiss
Match: SEC23_CRYNJ (Protein transport protein SEC23 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=SEC23 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.839e-52 Identity = 104/253 (41.11%), Postives = 151/253 (59.68%), Query Frame = 1
Query: 25 DPEGLDGVRMTWNVWPRSKLESSKCVIPLAATISLIKPHPHIPRLPYAPLRCK--TCSSVLNPFSRVDFTAKIWICPFCYQRNHFPPHYNA-VSETNLPGELYPHYTTVEYVNPIPDSNSNPFNQFRSKFTSPVFLFVLDTCMIEEEMEFVKSALRRAIGLLPDNALVGFVSFGTQVQVHELGFSDMSKVYVFRGSKDIPKEQVLEQLGLGSGYQKGRVQXXXXXXXXXXFPGTAITRFLLPSSDCEYTLNAV 774
D E DGVR +WNVWP S+LE+++ V+P++A + +K +P + Y P+ CK +C ++LNP+ +VD K+WICPFC QRN FPPHY+ +S NLP EL P +TT+EY P P+FL+V+DTC+ E+E++ +K L ++ LLP NALVG +++GT VHEL ++D K YVFRGSKD +Q+ + LGL + G P A ++FL+P CE+ L +
Sbjct: 5 DIEDKDGVRFSWNVWPSSRLEATRTVVPISALYTPLKEREDLPPVMYEPVTCKGSSCKAILNPYCQVDVRGKMWICPFCLQRNPFPPHYHQDLSPNNLPPELLPKFTTIEYTLSRPAQ------------IPPIFLYVVDTCVDEDELKALKETLVVSLSLLPPNALVGLITYGTMAMVHELAYADCPKAYVFRGSKDYQPKQIADMLGLNPSNRP-----IQPVRPGQPMPAPAASKFLMPVQACEFQLTNI 240 HSP 2 Score: 116.701 bits (291), Expect = 5.508e-45 Identity = 52/90 (57.78%), Postives = 69/90 (76.67%), Query Frame = 1
Query: 6118 FWQVFNNSPDETAYFRMMLNRENISNAAVMIQPSLISYSFNSPPAPALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEH 6387
F QVFNNSPDETA++R +LN +++N+ +MIQP+L+SY F+S P P LLD SI D ILLLD++F ++IFHG TIAQWR YQ Q ++
Sbjct: 584 FLQVFNNSPDETAFYRHVLNDSDVNNSLIMIQPTLMSYGFDSEPHPVLLDSVSIRPDVILLLDTFFHILIFHGETIAQWRKANYQEQEDY 673 HSP 3 Score: 90.1225 bits (222), Expect = 5.508e-45 Identity = 39/52 (75.00%), Postives = 47/52 (90.38%), Query Frame = 3
Query: 5883 DATRWLDRLLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFLQV 6038
D RWLDR+LIRLC KF DYRK+DP+SF L+P+FS++PQFMF+LRRSQFLQV
Sbjct: 536 DVLRWLDRMLIRLCQKFADYRKEDPTSFQLSPNFSIYPQFMFHLRRSQFLQV 587 HSP 4 Score: 67.3958 bits (163), Expect = 1.684e-9 Identity = 31/51 (60.78%), Postives = 35/51 (68.63%), Query Frame = 3
Query: 2178 WPVPPGSRPARCTGVALSVAMGLLGACNPGTGARIIALVGGPCTEGPGTVI 2330
WPV RP RCTGVALSVA+ LL P TGARI+ GGP T+GPG V+
Sbjct: 249 WPVEQDKRPLRCTGVALSVAVSLLETAFPNTGARIMLFSGGPATDGPGMVV 299 HSP 5 Score: 67.0106 bits (162), Expect = 2.268e-9 Identity = 27/58 (46.55%), Postives = 41/58 (70.69%), Query Frame = 1
Query: 2998 PMQIVSKDLSDPVRSHKDLDKDVAPYFKKAVKFYESLAKQLVSQGHVLDLFASALDQV 3171
P +V +L +P+RSH D+D+D +FK+A KFYE+L+K+ GH +D++A LDQV
Sbjct: 295 PGMVVGPELREPIRSHHDIDRDSVKHFKRASKFYEALSKRASVNGHAIDIYAGCLDQV 352 HSP 6 Score: 63.5438 bits (153), Expect = 2.045e-8 Identity = 33/50 (66.00%), Postives = 36/50 (72.00%), Query Frame = 2
Query: 6926 QARFLLAKLNPSATYNSAHEM---TAGSDVIFTDDVSLQVFFEHLQRLAV 7066
QARFLL+KLNPS T+ S AG IFTDDVSLQVF EHL+RLAV
Sbjct: 709 QARFLLSKLNPSTTHMSGSNYGAGPAGGQAIFTDDVSLQVFMEHLKRLAV 758
BLAST of rna-TanjilR_16801 vs. DB:Swiss
Match: SEC23_CRYNB (Protein transport protein SEC23 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=SEC23 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.839e-52 Identity = 104/253 (41.11%), Postives = 151/253 (59.68%), Query Frame = 1
Query: 25 DPEGLDGVRMTWNVWPRSKLESSKCVIPLAATISLIKPHPHIPRLPYAPLRCK--TCSSVLNPFSRVDFTAKIWICPFCYQRNHFPPHYNA-VSETNLPGELYPHYTTVEYVNPIPDSNSNPFNQFRSKFTSPVFLFVLDTCMIEEEMEFVKSALRRAIGLLPDNALVGFVSFGTQVQVHELGFSDMSKVYVFRGSKDIPKEQVLEQLGLGSGYQKGRVQXXXXXXXXXXFPGTAITRFLLPSSDCEYTLNAV 774
D E DGVR +WNVWP S+LE+++ V+P++A + +K +P + Y P+ CK +C ++LNP+ +VD K+WICPFC QRN FPPHY+ +S NLP EL P +TT+EY P P+FL+V+DTC+ E+E++ +K L ++ LLP NALVG +++GT VHEL ++D K YVFRGSKD +Q+ + LGL + G P A ++FL+P CE+ L +
Sbjct: 5 DIEDKDGVRFSWNVWPSSRLEATRTVVPISALYTPLKEREDLPPVMYEPVTCKGSSCKAILNPYCQVDVRGKMWICPFCLQRNPFPPHYHQDLSPNNLPPELLPKFTTIEYTLSRPAQ------------IPPIFLYVVDTCVDEDELKALKETLVVSLSLLPPNALVGLITYGTMAMVHELAYADCPKAYVFRGSKDYQPKQIADMLGLNPSNRP-----IQPVRPGQPMPAPAASKFLMPVQACEFQLTNI 240 HSP 2 Score: 116.701 bits (291), Expect = 5.508e-45 Identity = 52/90 (57.78%), Postives = 69/90 (76.67%), Query Frame = 1
Query: 6118 FWQVFNNSPDETAYFRMMLNRENISNAAVMIQPSLISYSFNSPPAPALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEH 6387
F QVFNNSPDETA++R +LN +++N+ +MIQP+L+SY F+S P P LLD SI D ILLLD++F ++IFHG TIAQWR YQ Q ++
Sbjct: 584 FLQVFNNSPDETAFYRHVLNDSDVNNSLIMIQPTLMSYGFDSEPHPVLLDSVSIRPDVILLLDTFFHILIFHGETIAQWRKANYQEQEDY 673 HSP 3 Score: 90.1225 bits (222), Expect = 5.508e-45 Identity = 39/52 (75.00%), Postives = 47/52 (90.38%), Query Frame = 3
Query: 5883 DATRWLDRLLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFLQV 6038
D RWLDR+LIRLC KF DYRK+DP+SF L+P+FS++PQFMF+LRRSQFLQV
Sbjct: 536 DVLRWLDRMLIRLCQKFADYRKEDPTSFQLSPNFSIYPQFMFHLRRSQFLQV 587 HSP 4 Score: 67.3958 bits (163), Expect = 1.684e-9 Identity = 31/51 (60.78%), Postives = 35/51 (68.63%), Query Frame = 3
Query: 2178 WPVPPGSRPARCTGVALSVAMGLLGACNPGTGARIIALVGGPCTEGPGTVI 2330
WPV RP RCTGVALSVA+ LL P TGARI+ GGP T+GPG V+
Sbjct: 249 WPVEQDKRPLRCTGVALSVAVSLLETAFPNTGARIMLFSGGPATDGPGMVV 299 HSP 5 Score: 67.0106 bits (162), Expect = 2.268e-9 Identity = 27/58 (46.55%), Postives = 41/58 (70.69%), Query Frame = 1
Query: 2998 PMQIVSKDLSDPVRSHKDLDKDVAPYFKKAVKFYESLAKQLVSQGHVLDLFASALDQV 3171
P +V +L +P+RSH D+D+D +FK+A KFYE+L+K+ GH +D++A LDQV
Sbjct: 295 PGMVVGPELREPIRSHHDIDRDSVKHFKRASKFYEALSKRASVNGHAIDIYAGCLDQV 352 HSP 6 Score: 63.5438 bits (153), Expect = 2.045e-8 Identity = 33/50 (66.00%), Postives = 36/50 (72.00%), Query Frame = 2
Query: 6926 QARFLLAKLNPSATYNSAHEM---TAGSDVIFTDDVSLQVFFEHLQRLAV 7066
QARFLL+KLNPS T+ S AG IFTDDVSLQVF EHL+RLAV
Sbjct: 709 QARFLLSKLNPSTTHMSGSNYGAGPAGGQAIFTDDVSLQVFMEHLKRLAV 758
BLAST of rna-TanjilR_16801 vs. DB:Swiss
Match: SC23A_BOVIN (Protein transport protein Sec23A OS=Bos taurus OX=9913 GN=SEC23A PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.891e-52 Identity = 95/207 (45.89%), Postives = 136/207 (65.70%), Query Frame = 1
Query: 31 EGLDGVRMTWNVWPRSKLESSKCVIPLAATISLIKPHPHIPRLPYAPLRCK--TCSSVLNPFSRVDFTAKIWICPFCYQRNHFPPHYNAVSETNLPGELYPHYTTVEYVNPIPDSNSNPFNQFRSKFTSPVFLFVLDTCMIEEEMEFVKSALRRAIGLLPDNALVGFVSFGTQVQVHELGFSDMSKVYVFRGSKDIPKEQVLEQLGL 645
E DGVR +WNVWP S+LE+++ V+P+AA + +K P +P + Y P+ C TC +VLNP +VD+ AK+W C FCYQRN FPP Y +SE N P EL P ++++EYV R +FL+V+DTCM +E+++ +K +++ ++ LLP ALVG ++FG VQVHELG +SK YVFRG+KD+ +Q+ E LGL
Sbjct: 12 EERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLCSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPTYAGISELNQPAELLPQFSSIEYVV------------LRGPQMPLIFLYVVDTCMEDEDLQALKESMQMSLSLLPPTALVGLITFGRMVQVHELGCEGISKSYVFRGTKDLSAKQLQEMLGL 206 HSP 2 Score: 119.398 bits (298), Expect = 4.504e-44 Identity = 51/91 (56.04%), Postives = 72/91 (79.12%), Query Frame = 1
Query: 6118 FWQVFNNSPDETAYFRMMLNRENISNAAVMIQPSLISYSFNSPPAPALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEHQ 6390
F QVFNNSPDE++Y+R R++++ + +MIQP L +YSF+ PP P LLD +SI ADRILL+D++F ++I+HG TIAQWR GYQ+ PE++
Sbjct: 589 FLQVFNNSPDESSYYRHHFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILADRILLMDTFFQILIYHGETIAQWRKSGYQDMPEYE 679 HSP 3 Score: 83.9593 bits (206), Expect = 4.504e-44 Identity = 39/56 (69.64%), Postives = 45/56 (80.36%), Query Frame = 3
Query: 5871 QETFDATRWLDRLLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFLQV 6038
+E D RWLDR LIRLC KFG+Y KDDPSSF + +FSL+PQFMF+LRRS FLQV
Sbjct: 537 EEGPDVLRWLDRQLIRLCQKFGEYHKDDPSSFRFSETFSLYPQFMFHLRRSPFLQV 592 HSP 4 Score: 68.9366 bits (167), Expect = 4.975e-10 Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 3
Query: 2178 WPVPPGSRPARCTGVALSVAMGLLGACNPGTGARIIALVGGPCTEGPGTVI 2330
WPVP G RP R +GVALS+A+GLL P TGARI+ +GGP T+GPG V+
Sbjct: 252 WPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGMVV 302 HSP 5 Score: 61.2326 bits (147), Expect = 1.189e-7 Identity = 29/74 (39.19%), Postives = 42/74 (56.76%), Query Frame = 1
Query: 2998 PMQIVSKDLSDPVRSHKDLDKDVAPYFKKAVKFYESLAKQLVSQGHVLDLFASALDQV------CANILIFSYL 3201
P +V +L P+RS D++KD A Y KK K +E+LA + + GHV+D++A ALDQ C L Y+
Sbjct: 298 PGMVVGDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEMKCCPNLTGGYM 371 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_16801 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_16801_La_Tanjil_v1.0 ID=rna-TanjilR_16801_La_Tanjil_v1.0; Name=rna-TanjilR_16801; organism=Lupinus angustifolius; type=mRNA; length=7075bpback to top protein sequence of rna-TanjilR_16801_La_Tanjil_v1.0 >rna-TanjilR_16801_La_Tanjil_v1.0 ID=rna-TanjilR_16801_La_Tanjil_v1.0; Name=rna-TanjilR_16801_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=778bpback to top mRNA from alignment at Chr_LG14-CM007374.1:2606161..2613235+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_16801_La_Tanjil_v1.0 ID=rna-TanjilR_16801_La_Tanjil_v1.0; Name=rna-TanjilR_16801; organism=Lupinus angustifolius; type=mRNA; length=7075bp; location=Sequence derived from: Chr_LG14-CM007374.1:2606161..2613235+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG14-CM007374.1:2606161..2613235+ >rna-TanjilR_16801_La_Tanjil_v1.0 ID=rna-TanjilR_16801_La_Tanjil_v1.0; Name=rna-TanjilR_16801; organism=Lupinus angustifolius; type=CDS; length=2337bp; location=Sequence derived from: Chr_LG14-CM007374.1:2606161..2613235+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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