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Transcript Overview
Name | rna-TanjilR_10499 |
Unique Name | rna-TanjilR_10499_La_Tanjil_v1.0 |
Type | mRNA |
Organism | Lupinus angustifolius (blue lupin) |
Sequence length | 2913 |
Product | hypothetical protein |
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
rna-TanjilR_10499 | rna-TanjilR_10499_La_Tanjil_v1.0-protein | Lupinus angustifolius | polypeptide |
rna-TanjilR_10499_La_Tanjil_v1.0 | rna-TanjilR_10499_La_Tanjil_v1.0 | Lupinus angustifolius | polypeptide |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
rna-TanjilR_10499_La_Tanjil_v1.0-exon-Chr_LG19-CM007379.1_La_Tanjil_v1.0-1579734366:2700848..2703760 | rna-TanjilR_10499_La_Tanjil_v1.0-exon-Chr_LG19-CM007379.1_La_Tanjil_v1.0-1579734366:2700848..2703760 | Lupinus angustifolius | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
rna-TanjilR_10499_La_Tanjil_v1.0-CDS-Chr_LG19-CM007379.1_La_Tanjil_v1.0-1579734366:2700848..2703760 | rna-TanjilR_10499_La_Tanjil_v1.0-CDS-Chr_LG19-CM007379.1_La_Tanjil_v1.0-1579734366:2700848..2703760 | Lupinus angustifolius | CDS |
Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 63..919 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_10499_La_Tanjil_v1.0 ID=rna-TanjilR_10499_La_Tanjil_v1.0; Name=rna-TanjilR_10499; organism=Lupinus angustifolius; type=mRNA; length=2913bp ATGAAAGTTTCGAAGGCTTACTTGGTTTTTCTTTGCTCTTCGTTATTCCT TTGCTCTGCTTTTAGTGAGCTTCTCACAAGTTATGATATCAAAAGAATAG TTCAGTCAGGTGTGAACTCAAAAGAGTCACACGATCCACCACATATCTTT ATTCCGAAAGGCTTAAACTATGTGATTGAGAGGCTTGTTCCTTCAGGTCC AAATGGAGAACAATCACCTGACCCACCACATCCTTTTGTTCCCAAGGATC ATGAAGTAAACTATCACATCAATAGGCTTGTTCCTTCAGGTCCAAATGGA GAACAATCACCTGACCCACCACACCCTTTTGTTCCCAATGATCATGAAGT AAACTATCATACCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAAT CACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTAT CATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGA CCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCA AGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCA CACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCT TGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCCTT TTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCT TCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTTCC CAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTC CAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGGAT CATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGG AGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAG TAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAA TCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTA TCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTG ACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATC AAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACC ACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGC TTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCCT TTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCC TTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTTC CCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGT CCAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGGA TCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATG GAGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAA GTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACA ATCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACT ATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCT GACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATAT CAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCAC CACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGG CTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCC TTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTC CTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTT CCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGG TCCAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGG ATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAAT GGAGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGA AGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAAC AATCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAAC TATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACC TGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATA TCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCA CCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAG GCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACC CTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTT CCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACTCTTTTGT TCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAG GTCCAAATCGAGAACAATCACCTCACCCACAACACGCTTTTGTTCCAAAA TTTTATGGTTTAAAACATGAAATTAAGAGGCTTGTTCCTTCGGGTCCCAA TCAAGAAGTGTAA back to topprotein sequence of rna-TanjilR_10499_La_Tanjil_v1.0 >rna-TanjilR_10499_La_Tanjil_v1.0 ID=rna-TanjilR_10499_La_Tanjil_v1.0; Name=rna-TanjilR_10499_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=970bp MKVSKAYLVFLCSSLFLCSAFSELLTSYDIKRIVQSGVNSKESHDPPHIF IPKGLNYVIERLVPSGPNGEQSPDPPHPFVPKDHEVNYHINRLVPSGPNG EQSPDPPHPFVPNDHEVNYHTKRLVPSGPNGEQSPDPPHPFVPKDHEVNY HIKRLVPSGPNGEQSPDPPHPFVPKDHEVNYHIKRLVPSGPNGEQSPDPP HPFVPKDHEVNYHIKRLVPSGPNGEQSPDPPHPFVPKDHEVNYHIKRLVP SGPNGEQSPDPPHPFVPKDHEVNYHIKRLVPSGPNGEQSPDPPHPFVPKD HEVNYHIKRLVPSGPNGEQSPDPPHPFVPKDHEVNYHIKRLVPSGPNGEQ SPDPPHPFVPKDHEVNYHIKRLVPSGPNGEQSPDPPHPFVPKDHEVNYHI KRLVPSGPNGEQSPDPPHPFVPKDHEVNYHIKRLVPSGPNGEQSPDPPHP FVPKDHEVNYHIKRLVPSGPNGEQSPDPPHPFVPKDHEVNYHIKRLVPSG PNGEQSPDPPHPFVPKDHEVNYHIKRLVPSGPNGEQSPDPPHPFVPKDHE VNYHIKRLVPSGPNGEQSPDPPHPFVPKDHEVNYHIKRLVPSGPNGEQSP DPPHPFVPKDHEVNYHIKRLVPSGPNGEQSPDPPHPFVPKDHEVNYHIKR LVPSGPNGEQSPDPPHPFVPKDHEVNYHIKRLVPSGPNGEQSPDPPHPFV PKDHEVNYHIKRLVPSGPNGEQSPDPPHPFVPKDHEVNYHIKRLVPSGPN GEQSPDPPHPFVPKDHEVNYHIKRLVPSGPNGEQSPDPPHPFVPKDHEVN YHIKRLVPSGPNGEQSPDPPHPFVPKDHEVNYHIKRLVPSGPNGEQSPDP PHPFVPKDHEVNYHIKRLVPSGPNGEQSPDPPHPFVPKDHEVNYHIKRLV PSGPNGEQSPDPPHSFVPKDHEVNYHIKRLVPSGPNREQSPHPQHAFVPK FYGLKHEIKRLVPSGPNQEV back to topmRNA from alignment at Chr_LG19-CM007379.1:2700848..2703760+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna-TanjilR_10499_La_Tanjil_v1.0 ID=rna-TanjilR_10499_La_Tanjil_v1.0; Name=rna-TanjilR_10499; organism=Lupinus angustifolius; type=mRNA; length=2913bp; location=Sequence derived from: Chr_LG19-CM007379.1:2700848..2703760+ (Lupinus angustifolius ATGAAAGTTTCGAAGGCTTACTTGGTTTTTCTTTGCTCTTCGTTATTCCT
TTGCTCTGCTTTTAGTGAGCTTCTCACAAGTTATGATATCAAAAGAATAG
TTCAGTCAGGTGTGAACTCAAAAGAGTCACACGATCCACCACATATCTTT
ATTCCGAAAGGCTTAAACTATGTGATTGAGAGGCTTGTTCCTTCAGGTCC
AAATGGAGAACAATCACCTGACCCACCACATCCTTTTGTTCCCAAGGATC
ATGAAGTAAACTATCACATCAATAGGCTTGTTCCTTCAGGTCCAAATGGA
GAACAATCACCTGACCCACCACACCCTTTTGTTCCCAATGATCATGAAGT
AAACTATCATACCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAAT
CACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTAT
CATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGA
CCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCA
AGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCA
CACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCT
TGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCCTT
TTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCT
TCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTTCC
CAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTC
CAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGGAT
CATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGG
AGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAG
TAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAA
TCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTA
TCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTG
ACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATC
AAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACC
ACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGC
TTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCCT
TTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCC
TTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTTC
CCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGT
CCAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGGA
TCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATG
GAGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAA
GTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACA
ATCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACT
ATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCT
GACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATAT
CAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCAC
CACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGG
CTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCC
TTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTC
CTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTT
CCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGG
TCCAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGG
ATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAAT
GGAGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGA
AGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAAC
AATCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAAC
TATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACC
TGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATA
TCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCA
CCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAG
GCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACC
CTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTT
CCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACTCTTTTGT
TCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAG
GTCCAAATCGAGAACAATCACCTCACCCACAACACGCTTTTGTTCCAAAA
TTTTATGGTTTAAAACATGAAATTAAGAGGCTTGTTCCTTCGGGTCCCAA
TCAAGAAGTGTAA back to topCoding sequence (CDS) from alignment at Chr_LG19-CM007379.1:2700848..2703760+ >rna-TanjilR_10499_La_Tanjil_v1.0 ID=rna-TanjilR_10499_La_Tanjil_v1.0; Name=rna-TanjilR_10499; organism=Lupinus angustifolius; type=CDS; length=2913bp; location=Sequence derived from: Chr_LG19-CM007379.1:2700848..2703760+ (Lupinus angustifolius ATGAAAGTTTCGAAGGCTTACTTGGTTTTTCTTTGCTCTTCGTTATTCCT TTGCTCTGCTTTTAGTGAGCTTCTCACAAGTTATGATATCAAAAGAATAG TTCAGTCAGGTGTGAACTCAAAAGAGTCACACGATCCACCACATATCTTT ATTCCGAAAGGCTTAAACTATGTGATTGAGAGGCTTGTTCCTTCAGGTCC AAATGGAGAACAATCACCTGACCCACCACATCCTTTTGTTCCCAAGGATC ATGAAGTAAACTATCACATCAATAGGCTTGTTCCTTCAGGTCCAAATGGA GAACAATCACCTGACCCACCACACCCTTTTGTTCCCAATGATCATGAAGT AAACTATCATACCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAAT CACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTAT CATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGA CCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCA AGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCA CACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCT TGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCCTT TTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCT TCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTTCC CAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTC CAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGGAT CATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGG AGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAG TAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAA TCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTA TCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTG ACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATC AAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACC ACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGC TTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCCT TTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCC TTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTTC CCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGT CCAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGGA TCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATG GAGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAA GTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACA ATCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACT ATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCT GACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATAT CAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCAC CACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGG CTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCC TTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTC CTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTT CCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGG TCCAAATGGAGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGG ATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAAT GGAGAACAATCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGA AGTAAACTATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAAC AATCACCTGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAAC TATCATATCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACC TGACCCACCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATA TCAAGAGGCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCA CCACACCCTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAG GCTTGTTCCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACC CTTTTGTTCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTT CCTTCAGGTCCAAATGGAGAACAATCACCTGACCCACCACACTCTTTTGT TCCCAAGGATCATGAAGTAAACTATCATATCAAGAGGCTTGTTCCTTCAG GTCCAAATCGAGAACAATCACCTCACCCACAACACGCTTTTGTTCCAAAA TTTTATGGTTTAAAACATGAAATTAAGAGGCTTGTTCCTTCGGGTCCCAA TCAAGAAGTGTAA back to top
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