evm.Ca_v2.0_10543

Transcript Overview


Name	evm.Ca_v2.0_10543
Unique Name	drCicArie.Frontier.2.0.Ca_v2.0_10543.1
Type	mRNA
Organism	Cicer arietinum (chickpea)
Sequence length	528

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Ca4_v2.0	chromosome	Ca4_v2.0:28547132..28547659 -	Cicer arietinum cv. CDC Frontier genome v2.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum cv. CDC Frontier genome v2.0	2024-06-26
Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11	2024-07-26
Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot	2024-07-26
InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0	2024-07-26
Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL	2024-07-26

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
carccaR241	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
carccaR251	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
carccaR283	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
carvvaR224	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
carvunR217	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
carvunR249	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
evm.Ca_v2.0_10543	drCicArie.Frontier.2.0.Ca_v2.0_10543	Cicer arietinum	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drCicArie.Frontier.2.0.cds.Ca_v2.0_10543.1	drCicArie.Frontier.2.0.cds.Ca_v2.0_10543.1	Cicer arietinum	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drCicArie.Frontier.2.0.Ca_v2.0_10543.1.exon1	drCicArie.Frontier.2.0.Ca_v2.0_10543.1.exon1	Cicer arietinum	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drCicArie.Frontier.2.0.Ca_v2.0_10543.1	drCicArie.Frontier.2.0.Ca_v2.0_10543.1	Cicer arietinum	polypeptide
drCicArie.Frontier.2.0.Ca_v2.0_10543.1	drCicArie.Frontier.2.0.Ca_v2.0_10543.1-protein	Cicer arietinum	polypeptide

Homology

[Close]

BLAST of evm.Ca_v2.0_10543 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:1511232-1511837 FORWARD LENGTH=201)

HSP 1 Score: 58.9214 bits (141), Expect = 7.351e-11
Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 0

Query:   38 ENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEF 77
            EN  Y CK+C +KF  +QALGGHQNAHR+ER + K +K F
Sbjct:   23 ENPIYKCKYCPRKFDKTQALGGHQNAHRKEREVEKQQKAF 62

[Close]

BLAST of evm.Ca_v2.0_10543 vs. Araport11
Match: | (Symbols: ZFP7 | zinc finger protein 7 | chr1:8726009-8726638 REVERSE LENGTH=209)

HSP 1 Score: 57.7658 bits (138), Expect = 2.102e-10
Identity = 35/93 (37.63%), Postives = 50/93 (53.76%), Query Frame = 0

Query:   42 YPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQ-----------LCSYSPILNHHQYAVGSPF---FHHQMHYPNVAP 120
            + C +C +KF SSQALGGHQNAH+RER ++K  +   MG   + G H            + ++S +L HH  +   P    FHHQ ++ N  P
Sbjct:   59 FSCNYCRRKFYSSQALGGHQNAHKRERTMAK--RAMHMGR--MFGHHHRPYTYTSSSLGMQAHSGLL-HHTLSQPQPLVSRFHHQGYFGNTVP 146

[Close]

BLAST of evm.Ca_v2.0_10543 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:335630-336277 FORWARD LENGTH=215)

HSP 1 Score: 55.8398 bits (133), Expect = 1.227e-9
Identity = 22/38 (57.89%), Postives = 31/38 (81.58%), Query Frame = 0

Query:   42 YPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQM 79
            + C FC K+FS+SQALGGHQNAH++ER ++K  KE ++
Sbjct:   67 FACTFCKKEFSTSQALGGHQNAHKQERSLAKRRKEIEI 104

[Close]

BLAST of evm.Ca_v2.0_10543 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:3469268-3470086 FORWARD LENGTH=272)

HSP 1 Score: 56.225 bits (134), Expect = 1.334e-9
Identity = 33/94 (35.11%), Postives = 54/94 (57.45%), Query Frame = 0

Query:   11 IDSEVSLSLSLGIGISYSPFKFLKSNEENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLG-PHQLCSYSPILNHHQYA 103
            ++ E++L   L  G+    F    S E+ + + C +C + F SSQALGGHQNAH+RER ++K  +  +M +    G P+    ++P+  H QY+
Sbjct:   74 LNQELNLLDCLETGVVTPSFNGSTSTEQKL-FSCNYCQRTFYSSQALGGHQNAHKRERTLAK--RGQRMASAAAFGHPY---GFAPVPFHGQYS 161

[Close]

BLAST of evm.Ca_v2.0_10543 vs. Araport11
Match: | (Symbols: ZFP4 | zinc finger protein 4 | chr1:24620063-24620845 REVERSE LENGTH=260)

HSP 1 Score: 55.4546 bits (132), Expect = 2.035e-9
Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 0

Query:   42 YPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGL 84
            + C +C +KF SSQALGGHQNAH+RER ++K  +  +MG  G+
Sbjct:   85 FSCNYCQRKFYSSQALGGHQNAHKRERTLAK--RAMRMGLAGV 125

[Close]

BLAST of evm.Ca_v2.0_10543 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:9885908-9886744 FORWARD LENGTH=278)

HSP 1 Score: 54.6842 bits (130), Expect = 3.819e-9
Identity = 29/55 (52.73%), Postives = 33/55 (60.00%), Query Frame = 0

Query:   30 FKFLKSNEENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGL 84
             KF  S    I Y C FC K FS+SQALGGHQNAH++ER   K  KE +    GL
Sbjct:   69 MKFYPSKSNKI-YTCHFCKKGFSTSQALGGHQNAHKQEREWDKKRKEMEAEYPGL 122

[Close]

BLAST of evm.Ca_v2.0_10543 vs. Araport11
Match: | (Symbols: ATZFP1, ZFP1 | zinc-finger protein 1, ARABIDOPSIS THALIANA ZINC-FINGER PROTEIN 1 | chr1:30339493-30340179 REVERSE LENGTH=228)

HSP 1 Score: 54.299 bits (129), Expect = 4.848e-9
Identity = 21/38 (55.26%), Postives = 30/38 (78.95%), Query Frame = 0

Query:   42 YPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQM 79
            + C +C +KF SSQALGGHQNAH+RER ++K  + ++M
Sbjct:   68 FSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKM 105

[Close]

BLAST of evm.Ca_v2.0_10543 vs. Araport11
Match: | (Symbols: KNU | KNUCKLES | chr5:4522260-4522745 FORWARD LENGTH=161)

HSP 1 Score: 53.1434 bits (126), Expect = 5.114e-9
Identity = 19/31 (61.29%), Postives = 27/31 (87.10%), Query Frame = 0

Query:   42 YPCKFCNKKFSSSQALGGHQNAHRRERVISK 72
            +PC++C +KF +SQALGGHQNAH+RER  ++
Sbjct:   38 FPCQYCPRKFYTSQALGGHQNAHKRERAAAR 68

[Close]

BLAST of evm.Ca_v2.0_10543 vs. Araport11
Match: | (Symbols: ZFP3 | zinc finger protein 3 | chr5:8687524-8688231 FORWARD LENGTH=235)

HSP 1 Score: 52.7582 bits (125), Expect = 1.654e-8
Identity = 25/61 (40.98%), Postives = 35/61 (57.38%), Query Frame = 0

Query:   42 YPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQLCSYSPILNHHQY 102
            + C +C + F SSQALGGHQNAH+RER ++K  +           P+    +SP+  H QY
Sbjct:   61 FSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPY---GFSPLPFHGQY 118

[Close]

BLAST of evm.Ca_v2.0_10543 vs. Araport11
Match: | (Symbols: ZFP6 | zinc finger protein 6 | chr1:25016644-25017237 FORWARD LENGTH=197)

HSP 1 Score: 51.9878 bits (123), Expect = 2.376e-8
Identity = 22/50 (44.00%), Postives = 37/50 (74.00%), Query Frame = 0

Query:   35 SNEENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGL 84
            S  E+ +Y C++C ++F++SQALGGHQNAH++ER +  +++   + T GL
Sbjct:   34 SGSESRKYECQYCCREFANSQALGGHQNAHKKERQL--LKRAQMLATRGL 81

[Close]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q39266|ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.055e-9
Identity = 35/93 (37.63%), Postives = 50/93 (53.76%), Query Frame = 0

Query:   42 YPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQ-----------LCSYSPILNHHQYAVGSPF---FHHQMHYPNVAP 120
            + C +C +KF SSQALGGHQNAH+RER ++K  +   MG   + G H            + ++S +L HH  +   P    FHHQ ++ N  P
Sbjct:   59 FSCNYCRRKFYSSQALGGHQNAHKRERTMAK--RAMHMGR--MFGHHHRPYTYTSSSLGMQAHSGLL-HHTLSQPQPLVSRFHHQGYFGNTVP 146

[Close]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q39263|ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 55.4546 bits (132), Expect = 2.001e-8
Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 0

Query:   42 YPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGL 84
            + C +C +KF SSQALGGHQNAH+RER ++K  +  +MG  G+
Sbjct:   85 FSCNYCQRKFYSSQALGGHQNAHKRERTLAK--RAMRMGLAGV 125

[Close]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q42485|ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 4.758e-8
Identity = 21/38 (55.26%), Postives = 30/38 (78.95%), Query Frame = 0

Query:   42 YPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQM 79
            + C +C +KF SSQALGGHQNAH+RER ++K  + ++M
Sbjct:   68 FSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKM 105

[Close]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FFX4|KNU_ARATH (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 4.832e-8
Identity = 19/31 (61.29%), Postives = 27/31 (87.10%), Query Frame = 0

Query:   42 YPCKFCNKKFSSSQALGGHQNAHRRERVISK 72
            +PC++C +KF +SQALGGHQNAH+RER  ++
Sbjct:   38 FPCQYCPRKFYTSQALGGHQNAHKRERAAAR 68

[Close]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q39262|ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 1.625e-7
Identity = 25/61 (40.98%), Postives = 35/61 (57.38%), Query Frame = 0

Query:   42 YPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQLCSYSPILNHHQY 102
            + C +C + F SSQALGGHQNAH+RER ++K  +           P+    +SP+  H QY
Sbjct:   61 FSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPY---GFSPLPFHGQY 118

[Close]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q39265|ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 2.326e-7
Identity = 22/50 (44.00%), Postives = 37/50 (74.00%), Query Frame = 0

Query:   35 SNEENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGL 84
            S  E+ +Y C++C ++F++SQALGGHQNAH++ER +  +++   + T GL
Sbjct:   34 SGSESRKYECQYCCREFANSQALGGHQNAHKKERQL--LKRAQMLATRGL 81

[Close]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q39261|ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 2.796e-7
Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 0

Query:   42 YPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEF 77
            + C +C +KF SSQALGGHQNAH+ ER ++K  +E 
Sbjct:   52 FSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREL 87

[Close]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2Y1S9|A0A1S2Y1S9_CICAR (Zinc finger protein 7-like OS=Cicer arietinum OX=3827 GN=LOC101505119 PE=4 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 6.461e-128
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0

Query:    1 MEETTTLSSTIDSEVSLSLSLGIGISYSPFKFLKSNEENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQLCSYSPILNHHQYAVGSPFFHHQMHYPNVAPSWTQFVAPIGYANPFGMMNNSLGTPTTPQNNNDNIHYVDDNRQISSSFPHLFLNH 175
            MEETTTLSSTIDSEVSLSLSLGIGISYSPFKFLKSNEENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQLCSYSPILNHHQYAVGSPFFHHQMHYPNVAPSWTQFVAPIGYANPFGMMNNSLGTPTTPQNNNDNIHYVDDNRQISSSFPHLFLNH
Sbjct:   16 MEETTTLSSTIDSEVSLSLSLGIGISYSPFKFLKSNEENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQLCSYSPILNHHQYAVGSPFFHHQMHYPNVAPSWTQFVAPIGYANPFGMMNNSLGTPTTPQNNNDNIHYVDDNRQISSSFPHLFLNH 190

[Close]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q7XJ86|A0A3Q7XJ86_CICAR (Zinc finger protein 8-like OS=Cicer arietinum OX=3827 GN=LOC113784498 PE=4 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.518e-66
Identity = 128/216 (59.26%), Postives = 139/216 (64.35%), Query Frame = 0

Query:    1 MEETTTLSSTIDSEVSLSLSLGIGISYSPFKFLKSNEENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQLCSYSPILNHHQYAVGSPFFHHQMHYPNVAPSWTQFVAPIGYANPFGMMNNSLGTPTTPQ-----------------------NN-------------------NDNIHYVDDNRQISSSFPHLFLN 174
            MEETTT     DSEV LSLSLG G    PF  LK+NEE  EYPCKFCNKKF+SSQALGGHQNAHRRERV+S+++KEFQMGTFGLLG HQL  YSPI NHHQYA  SPFFH   H+PN+APSWTQFVAP  Y NPFG +NNS  T TTPQ                       NN                   N+NI YV +NRQISSSFP L LN
Sbjct:   19 MEETTT----ADSEVLLSLSLGGGGGSFPFNSLKNNEEQREYPCKFCNKKFTSSQALGGHQNAHRRERVLSRMDKEFQMGTFGLLGAHQLYPYSPIPNHHQYATTSPFFH---HHPNMAPSWTQFVAPSSYGNPFGTLNNSWSTQTTPQNSNNNNSNNNNNNNNLGFGNYEINNQLQVPSFGAAGLNGTVLTGNNNIPYVANNRQISSSFPDLSLN 227

[Close]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3E4U4|A0A1S3E4U4_CICAR (Zinc finger protein 7-like OS=Cicer arietinum OX=3827 GN=LOC105851954 PE=4 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.172e-57
Identity = 108/178 (60.67%), Postives = 124/178 (69.66%), Query Frame = 0

Query:    1 MEETTT-LSSTIDSEVSLSLSLGIGISYS--PFKFLKSNEENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEK-EFQMGTFGLLGPHQLCSYSPILNHHQYAVGSPFFHHQMHYPNVAPSWTQFVAPIGYANP-FGMMNNSLGTPTTPQNNNDNIHYVDDNRQISSSFPHLFL 173
            MEE +   S   DSEVSLSL+L +G   S  PFK LK      EYPCKFCNKKF SSQALGGHQ+AHR ER++S+I+K EFQM T GLL  HQ+  YS I N HQY + SPFFHH MH PN+APSWTQFVAP+GYANP FG+    LG+    +NN  NIHY  +N Q SSS P L L
Sbjct:   16 MEEISKPHSCAADSEVSLSLTLSLGERRSSFPFKSLKR-----EYPCKFCNKKFLSSQALGGHQHAHRHERMLSRIDKLEFQMETLGLLSSHQVYPYSSISNLHQYEIDSPFFHHHMHRPNMAPSWTQFVAPVGYANPSFGVAG--LGSAVLMKNN--NIHYDRNNYQTSSSLPDLSL 184

[Close]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3P8A5|A0A2K3P8A5_TRIPR (Zinc finger protein OS=Trifolium pratense OX=57577 GN=L195_g008133 PE=4 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.675e-34
Identity = 78/150 (52.00%), Postives = 93/150 (62.00%), Query Frame = 0

Query:   11 IDSEVSLSLSLGI---GISYSPFKFLKSNEENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQLCSYSPILNHHQY----AVGSPFFHHQMHYPNVAPSWTQFVAPIGYANPFGMMNNSLGTPTTPQNNND 153
            +DS +SLSLS+     G S S  K LK +EE  +YPCKFCNK FS+ QALGGHQNAHRRERV+ ++++E QMGTFG LGPH LC  S    HHQY    A  +PF++           W   VAP  Y NPFGM+NNS     T  NNN 
Sbjct:   28 VDSHLSLSLSIRAERGGESSS--KSLKIHEEQRKYPCKFCNKMFSNPQALGGHQNAHRRERVLLRMDREIQMGTFG-LGPH-LCPCSNPRYHHQYPLTAAGWTPFYY--------GIRWPHLVAPTSYGNPFGMINNSAWAIQTALNNNQ 165

[Close]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6NCE2|A0A2Z6NCE2_TRISU (C2H2-type domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_20180 PE=4 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.910e-34
Identity = 73/132 (55.30%), Postives = 85/132 (64.39%), Query Frame = 0

Query:   30 FKFLKSNEENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQLCSYSPILNHHQY---AVGSPFFHHQMHYPNVAPSWTQFVAPIGYANPFGMMNN--SLGTPTTPQNNNDNIH 156
            FK LKS  E  +YPCKFC+KKF +SQALGGHQNAHRRERV+SK++KE QMGTF L  P  +C YS  L HHQY     GS  F+H +  P         VAP GY NPFGM+NN  S  T T   N N+N+ 
Sbjct:   49 FKSLKSRGEQRDYPCKFCDKKFLTSQALGGHQNAHRRERVLSKMDKEIQMGTFALGPP--ICPYSNHLYHHQYPFTPAGSNSFYHGIGSP------AHLVAPAGYGNPFGMINNNSSWATQTLLNNYNNNMQ 172

[Close]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy TrEMBL (2024)
Match: tr|A0A072V937|A0A072V937_MEDTR (C2H2-type zinc finger protein OS=Medicago truncatula OX=3880 GN=25486990 PE=4 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 5.618e-34
Identity = 74/127 (58.27%), Postives = 81/127 (63.78%), Query Frame = 0

Query:   30 FKFLKSNEENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQLCSYSPILNHHQY----AVGSPFFHHQMHYPNVAPSWTQFVAPIGYANPFGMMNNSLGTPTTPQNNN 152
            FK LKS+EE  EYPCKFCNKKF SSQALGGHQNAHRRERV+S+IEKE Q+ TFG LG H    YS   NHHQY    A  SP +H           W QFV+P  Y N  GM+ NS     TP NNN
Sbjct:   49 FKPLKSHEEQREYPCKFCNKKFPSSQALGGHQNAHRRERVLSRIEKEIQLRTFG-LGVHHFFPYS---NHHQYPFIVAGSSPLYH--------GVGWPQFVSPAIYGNSIGMIINSAWPTQTPLNNN 163

[Close]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3P8I0|A0A2K3P8I0_TRIPR (Zinc finger protein 3-like OS=Trifolium pratense OX=57577 GN=L195_g008205 PE=4 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 5.141e-33
Identity = 77/147 (52.38%), Postives = 90/147 (61.22%), Query Frame = 0

Query:   12 DSEVSLSLSLGIGISYSPFKF-LKSNEENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQLCSYSPILNHHQY----AVGSPFFHHQMHYPNVAPSWTQFVAPIGYANPFGMMNNSLGTPTTPQNNND 153
            DS +SLSLS+G G         LK ++E  +YPCKFCNK FSS Q LGGHQNAHRRERV+S++++E QMGTFG LGPH LC  S    HHQY    A  +PF+H           W   VAP  Y NPFGM+NNS     T  NNN 
Sbjct:   29 DSHLSLSLSIGGGRGRGSSSKSLKIHDEQRKYPCKFCNKMFSSPQGLGGHQNAHRRERVLSRMDREIQMGTFG-LGPH-LCPCSNRHYHHQYPLTTAGSTPFYH--------GIRWPHLVAPTSYGNPFGMINNSAWATQTQLNNNQ 165

[Close]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy TrEMBL (2024)
Match: tr|A0A396GYM7|A0A396GYM7_MEDTR (Putative transcription factor C2H2 family OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr7g0239711 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.773e-27
Identity = 64/129 (49.61%), Postives = 77/129 (59.69%), Query Frame = 0

Query:   37 EENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQLCSYSPILNHHQYAVG--SPFFHHQMHYPNVAPSWTQFVAPIGYANPFGMMNNSLGTPTTPQNNNDNIHYVDDNRQ 163
            E+  EYPCKFC+KKFSSSQALGGHQ AH+RERV+++IEKE Q+GTF  LG H  C YS I + + + +   SP +H           W Q VA   Y NPF M+NN      TP NNN      D N Q
Sbjct:   54 EKLREYPCKFCDKKFSSSQALGGHQGAHKRERVLARIEKEIQLGTF-RLGDHHFCPYS-IGHPYPFTIAGSSPIYH--------GLGWPQLVAHASYGNPFEMINNYDWATQTPLNNNVGFENHDLNNQ 172

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BLAST of evm.Ca_v2.0_10543 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3L2W1|A0A2K3L2W1_TRIPR (Zinc finger protein 3-like OS=Trifolium pratense OX=57577 GN=L195_g028778 PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.795e-25
Identity = 64/116 (55.17%), Postives = 76/116 (65.52%), Query Frame = 0

Query:    1 MEETTTLSSTIDSEVSLSLSLGIGIS-YSPFKFLKSNEENIEYPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQLCSYSPILNHHQYAVG-----SPFFH 110
            MEE    +ST    V LSLS+G G    S FK LK +EE  +YPCKFC K FSS QALGGHQNAHRRERV+ +++KE QMGTFG LGP +LC  S    HH+Y        +PF+H
Sbjct:   13 MEEIVGANST----VLLSLSIGGGRGGTSSFKTLKIHEEQRKYPCKFCRKMFSSPQALGGHQNAHRRERVLLRMDKEIQMGTFG-LGP-RLCPCSNRHYHHRYIPSLLHGLTPFYH 122

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BLAST of evm.Ca_v2.0_10543 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P4BWI4|A0A6P4BWI4_ARADU (Zinc finger protein 4-like OS=Arachis duranensis OX=130453 GN=LOC107458588 PE=4 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.287e-24
Identity = 64/133 (48.12%), Postives = 79/133 (59.40%), Query Frame = 0

Query:   12 DSEVSLSLSLG-------IGISYSPFKF--LKSNEENIE----YPCKFCNKKFSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQLCSYSPILNHHQYAVGS---PFF------HHQMHYPNVAPSW 122
            DSEV LSLSLG        G S S F F  LK+ E   +    +PCKFCNKKF+SSQALGGHQNAH+RERV+SK++K F  GTF L   HQLC+Y   + ++    GS   P +      HH +H P   P +
Sbjct:   29 DSEVLLSLSLGRNNNNMETGDSSSNFTFKSLKTAENQTKQERLFPCKFCNKKFASSQALGGHQNAHKRERVLSKMDKMFNRGTFALDASHQLCAYPTTMTNYLPYRGSNSIPLYQGAHMHHHILHMPCTMPGF 161

The following BLAST results are available for this feature:

BLAST of evm.Ca_v2.0_10543 vs. Araport11
BLAST of evm.Ca_v2.0_10543 vs. ExPASy Swiss-Prot (2024)
BLAST of evm.Ca_v2.0_10543 vs. ExPASy TrEMBL (2024)

BLAST of evm.Ca_v2.0_10543 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11)
Total hits: 10


Match Name	E-value	Identity	Description
\|	7.351e-11	60.00	Symbols: no symbol available \| no full name availa...	[more]
\|	2.102e-10	37.63	Symbols: ZFP7 \| zinc finger protein 7 \| chr1:87260...	[more]
\|	1.227e-9	57.89	Symbols: no symbol available \| no full name availa...	[more]
\|	1.334e-9	35.11	Symbols: no symbol available \| no full name availa...	[more]
\|	2.035e-9	53.49	Symbols: ZFP4 \| zinc finger protein 4 \| chr1:24620...	[more]
\|	3.819e-9	52.73	Symbols: no symbol available \| no full name availa...	[more]
\|	4.848e-9	55.26	Symbols: ATZFP1, ZFP1 \| zinc-finger protein 1, ARA...	[more]
\|	5.114e-9	61.29	Symbols: KNU \| KNUCKLES \| chr5:4522260-4522745 FOR...	[more]
\|	1.654e-8	40.98	Symbols: ZFP3 \| zinc finger protein 3 \| chr5:86875...	[more]
\|	2.376e-8	44.00	Symbols: ZFP6 \| zinc finger protein 6 \| chr1:25016...	[more]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot )
Total hits: 7


Match Name	E-value	Identity	Description
sp\|Q39266\|ZFP7_ARATH	2.055e-9	37.63	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3...	[more]
sp\|Q39263\|ZFP4_ARATH	2.001e-8	53.49	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3...	[more]
sp\|Q42485\|ZFP1_ARATH	4.758e-8	55.26	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3...	[more]
sp\|Q9FFX4\|KNU_ARATH	4.832e-8	61.29	Zinc finger protein KNUCKLES OS=Arabidopsis thalia...	[more]
sp\|Q39262\|ZFP3_ARATH	1.625e-7	40.98	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3...	[more]
sp\|Q39265\|ZFP6_ARATH	2.326e-7	44.00	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3...	[more]
sp\|Q39261\|ZFP2_ARATH	2.796e-7	55.56	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of evm.Ca_v2.0_10543 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A1S2Y1S9\|A0A1S2Y1S9_CICAR	6.461e-128	100.00	Zinc finger protein 7-like OS=Cicer arietinum OX=3...	[more]
tr\|A0A3Q7XJ86\|A0A3Q7XJ86_CICAR	1.518e-66	59.26	Zinc finger protein 8-like OS=Cicer arietinum OX=3...	[more]
tr\|A0A1S3E4U4\|A0A1S3E4U4_CICAR	1.172e-57	60.67	Zinc finger protein 7-like OS=Cicer arietinum OX=3...	[more]
tr\|A0A2K3P8A5\|A0A2K3P8A5_TRIPR	4.675e-34	52.00	Zinc finger protein OS=Trifolium pratense OX=57577...	[more]
tr\|A0A2Z6NCE2\|A0A2Z6NCE2_TRISU	4.910e-34	55.30	C2H2-type domain-containing protein OS=Trifolium s...	[more]
tr\|A0A072V937\|A0A072V937_MEDTR	5.618e-34	58.27	C2H2-type zinc finger protein OS=Medicago truncatu...	[more]
tr\|A0A2K3P8I0\|A0A2K3P8I0_TRIPR	5.141e-33	52.38	Zinc finger protein 3-like OS=Trifolium pratense O...	[more]
tr\|A0A396GYM7\|A0A396GYM7_MEDTR	4.773e-27	49.61	Putative transcription factor C2H2 family OS=Medic...	[more]
tr\|A0A2K3L2W1\|A0A2K3L2W1_TRIPR	3.795e-25	55.17	Zinc finger protein 3-like OS=Trifolium pratense O...	[more]
tr\|A0A6P4BWI4\|A0A6P4BWI4_ARADU	1.287e-24	48.12	Zinc finger protein 4-like OS=Arachis duranensis O...	[more]

InterPro

Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 29..81 e-value: 7.7E-8 score: 34.0
IPR013087	Zinc finger C2H2-type	PFAM	PF13912	zf-C2H2_6	coord: 42..67 e-value: 8.3E-4 score: 30.5
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 42..69 score: 11.738611
IPR045320	Zinc finger protein JAGGED/STAMENLESS 1-like	PANTHER	PTHR45730	ZINC FINGER PROTEIN JAGGED	coord: 13..145
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 41..69

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Ca4_v2.0:28547132..28547659-
coding sequence from alignment at Ca4_v2.0:28547132..28547659-

mRNA sequence

>drCicArie.Frontier.2.0.Ca_v2.0_10543.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_10543.1; Name=evm.Ca_v2.0_10543; organism=Cicer arietinum; type=mRNA; length=528bp
ATGGAGGAAACAACAACACTTTCTTCTACAATTGATTCAGAAGTGTCACT
GTCTCTGAGTTTAGGAATAGGTATATCTTATTCTCCATTCAAATTCCTTA
AGAGCAATGAAGAGAATATAGAATACCCATGCAAGTTTTGCAACAAGAAA
TTTTCGAGTTCTCAAGCTTTAGGAGGACACCAAAACGCGCATAGACGCGA
AAGGGTGATATCAAAAATAGAAAAAGAGTTTCAAATGGGAACTTTTGGAC
TACTTGGTCCCCATCAATTATGTTCATATTCACCCATTCTAAATCATCAT
CAATATGCAGTTGGGTCACCATTTTTTCATCATCAAATGCATTATCCCAA
TGTGGCTCCATCATGGACTCAATTTGTTGCACCTATAGGATATGCTAACC
CATTTGGGATGATGAACAACTCTTTGGGTACTCCAACTACTCCACAAAAT
AATAATGATAATATTCACTATGTTGATGATAACCGCCAAATTTCATCCTC
ATTTCCTCATTTGTTCCTCAACCACTAG

protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_10543.1

>drCicArie.Frontier.2.0.Ca_v2.0_10543.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_10543.1; Name=drCicArie.Frontier.2.0.Ca_v2.0_10543.1; organism=Cicer arietinum; type=polypeptide; length=175bp
MEETTTLSSTIDSEVSLSLSLGIGISYSPFKFLKSNEENIEYPCKFCNKK
FSSSQALGGHQNAHRRERVISKIEKEFQMGTFGLLGPHQLCSYSPILNHH
QYAVGSPFFHHQMHYPNVAPSWTQFVAPIGYANPFGMMNNSLGTPTTPQN
NNDNIHYVDDNRQISSSFPHLFLNH

mRNA from alignment at Ca4_v2.0:28547132..28547659-

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>drCicArie.Frontier.2.0.Ca_v2.0_10543.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_10543.1; Name=evm.Ca_v2.0_10543; organism=Cicer arietinum; type=mRNA; length=528bp; location=Sequence derived from: Ca4_v2.0:28547132..28547659- (Cicer arietinum
ATGGAGGAAACAACAACACTTTCTTCTACAATTGATTCAGAAGTGTCACT
GTCTCTGAGTTTAGGAATAGGTATATCTTATTCTCCATTCAAATTCCTTA
AGAGCAATGAAGAGAATATAGAATACCCATGCAAGTTTTGCAACAAGAAA
TTTTCGAGTTCTCAAGCTTTAGGAGGACACCAAAACGCGCATAGACGCGA
AAGGGTGATATCAAAAATAGAAAAAGAGTTTCAAATGGGAACTTTTGGAC
TACTTGGTCCCCATCAATTATGTTCATATTCACCCATTCTAAATCATCAT
CAATATGCAGTTGGGTCACCATTTTTTCATCATCAAATGCATTATCCCAA
TGTGGCTCCATCATGGACTCAATTTGTTGCACCTATAGGATATGCTAACC
CATTTGGGATGATGAACAACTCTTTGGGTACTCCAACTACTCCACAAAAT
AATAATGATAATATTCACTATGTTGATGATAACCGCCAAATTTCATCCTC
ATTTCCTCATTTGTTCCTCAACCACTAG

Coding sequence (CDS) from alignment at Ca4_v2.0:28547132..28547659-

>drCicArie.Frontier.2.0.Ca_v2.0_10543.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_10543.1; Name=evm.Ca_v2.0_10543; organism=Cicer arietinum; type=CDS; length=528bp; location=Sequence derived from: Ca4_v2.0:28547132..28547659- (Cicer arietinum
ATGGAGGAAACAACAACACTTTCTTCTACAATTGATTCAGAAGTGTCACT
GTCTCTGAGTTTAGGAATAGGTATATCTTATTCTCCATTCAAATTCCTTA
AGAGCAATGAAGAGAATATAGAATACCCATGCAAGTTTTGCAACAAGAAA
TTTTCGAGTTCTCAAGCTTTAGGAGGACACCAAAACGCGCATAGACGCGA
AAGGGTGATATCAAAAATAGAAAAAGAGTTTCAAATGGGAACTTTTGGAC
TACTTGGTCCCCATCAATTATGTTCATATTCACCCATTCTAAATCATCAT
CAATATGCAGTTGGGTCACCATTTTTTCATCATCAAATGCATTATCCCAA
TGTGGCTCCATCATGGACTCAATTTGTTGCACCTATAGGATATGCTAACC
CATTTGGGATGATGAACAACTCTTTGGGTACTCCAACTACTCCACAAAAT
AATAATGATAATATTCACTATGTTGATGATAACCGCCAAATTTCATCCTC
ATTTCCTCATTTGTTCCTCAACCACTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR013087	Znf_C2H2_type
IPR045320	JAGGED/SL1-like
IPR036236	Znf_C2H2_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	DNA-binding transcription factor activity

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evm.Ca_v2.0_10543