evm.Ca_v2.0_10417

Transcript Overview


Name	evm.Ca_v2.0_10417
Unique Name	drCicArie.Frontier.2.0.Ca_v2.0_10417.1
Type	mRNA
Organism	Cicer arietinum (chickpea)
Sequence length	339

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Ca4_v2.0	chromosome	Ca4_v2.0:24420934..24421778 +	Cicer arietinum cv. CDC Frontier genome v2.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum cv. CDC Frontier genome v2.0	2024-06-26
Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11	2024-07-26
Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot	2024-07-26
InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0	2024-07-26
Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL	2024-07-26

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
carccaR241	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
carccaR272	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
carvumR319	Vigna umbellata FF25 genome v1.0	Vigna umbellata
carvumR366	Vigna umbellata FF25 genome v1.0	Vigna umbellata
carvvaR223	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
carvvaR319	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
carvasR323	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
carvstR332	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
carvasR384	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
carvstR394	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
carvunR209	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
carpvfR288	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
carvunR255	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
carpvfR392	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
evm.Ca_v2.0_10417	drCicArie.Frontier.2.0.Ca_v2.0_10417	Cicer arietinum	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drCicArie.Frontier.2.0.cds.Ca_v2.0_10417.1	drCicArie.Frontier.2.0.cds.Ca_v2.0_10417.1	Cicer arietinum	CDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_10417.1	drCicArie.Frontier.2.0.cds.Ca_v2.0_10417.1_2	Cicer arietinum	CDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_10417.1	drCicArie.Frontier.2.0.cds.Ca_v2.0_10417.1_3	Cicer arietinum	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drCicArie.Frontier.2.0.Ca_v2.0_10417.1.exon1	drCicArie.Frontier.2.0.Ca_v2.0_10417.1.exon1	Cicer arietinum	exon
drCicArie.Frontier.2.0.Ca_v2.0_10417.1.exon2	drCicArie.Frontier.2.0.Ca_v2.0_10417.1.exon2	Cicer arietinum	exon
drCicArie.Frontier.2.0.Ca_v2.0_10417.1.exon3	drCicArie.Frontier.2.0.Ca_v2.0_10417.1.exon3	Cicer arietinum	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drCicArie.Frontier.2.0.Ca_v2.0_10417.1	drCicArie.Frontier.2.0.Ca_v2.0_10417.1	Cicer arietinum	polypeptide
drCicArie.Frontier.2.0.Ca_v2.0_10417.1	drCicArie.Frontier.2.0.Ca_v2.0_10417.1-protein	Cicer arietinum	polypeptide

Homology

[Close]

BLAST of evm.Ca_v2.0_10417 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:5891375-5894296 FORWARD LENGTH=973)

HSP 1 Score: 78.1814 bits (191), Expect = 7.416e-18
Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 0

Query:   54 RAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            +A  + GE IAVKKLNSRG  +S D S  AEISTLGK RH NIVKL+ FC+H++SNLL
Sbjct:  815 KAEMSGGEVIAVKKLNSRGEGASSDNSFRAEISTLGKIRHRNIVKLYGFCYHQNSNLL 872

[Close]

BLAST of evm.Ca_v2.0_10417 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:5891375-5894855 FORWARD LENGTH=1101)

HSP 1 Score: 77.7962 bits (190), Expect = 8.557e-18
Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 0

Query:   54 RAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            +A  + GE IAVKKLNSRG  +S D S  AEISTLGK RH NIVKL+ FC+H++SNLL
Sbjct:  815 KAEMSGGEVIAVKKLNSRGEGASSDNSFRAEISTLGKIRHRNIVKLYGFCYHQNSNLL 872

[Close]

BLAST of evm.Ca_v2.0_10417 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:5891375-5894855 FORWARD LENGTH=1133)

HSP 1 Score: 77.7962 bits (190), Expect = 8.570e-18
Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 0

Query:   54 RAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            +A  + GE IAVKKLNSRG  +S D S  AEISTLGK RH NIVKL+ FC+H++SNLL
Sbjct:  815 KAEMSGGEVIAVKKLNSRGEGASSDNSFRAEISTLGKIRHRNIVKLYGFCYHQNSNLL 872

[Close]

BLAST of evm.Ca_v2.0_10417 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:25583198-25586392 FORWARD LENGTH=1038)

HSP 1 Score: 59.3066 bits (142), Expect = 2.715e-11
Identity = 33/61 (54.10%), Postives = 39/61 (63.93%), Query Frame = 0

Query:   54 RAVTNDGEFIAVKKLNSR---GGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            +AV   G  +AVKKL S    G  +++D S  AEI TLG  RH NIVKLH FC H+ SNLL
Sbjct:  756 KAVLPAGYTLAVKKLASNHEGGNNNNVDNSFRAEILTLGNIRHRNIVKLHGFCNHQGSNLL 816

[Close]

BLAST of evm.Ca_v2.0_10417 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:25583006-25586392 FORWARD LENGTH=1102)

HSP 1 Score: 58.9214 bits (141), Expect = 3.245e-11
Identity = 33/61 (54.10%), Postives = 39/61 (63.93%), Query Frame = 0

Query:   54 RAVTNDGEFIAVKKLNSR---GGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            +AV   G  +AVKKL S    G  +++D S  AEI TLG  RH NIVKLH FC H+ SNLL
Sbjct:  820 KAVLPAGYTLAVKKLASNHEGGNNNNVDNSFRAEILTLGNIRHRNIVKLHGFCNHQGSNLL 880

[Close]

BLAST of evm.Ca_v2.0_10417 vs. Araport11
Match: | (Symbols: BAM3 | BARELY ANY MERISTEM 3 | chr4:10949822-10952924 FORWARD LENGTH=992)

HSP 1 Score: 56.6102 bits (135), Expect = 2.605e-10
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 0

Query:   49 AIVYRRAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
             IVY+  + N GE +AVKKL +    SS D  + AEI TLG+ RH NIV+L  FC ++D NLL
Sbjct:  722 GIVYKGVMPN-GEEVAVKKLLTITKGSSHDNGLAAEIQTLGRIRHRNIVRLLAFCSNKDVNLL 783

[Close]

BLAST of evm.Ca_v2.0_10417 vs. Araport11
Match: | (Symbols: BAM1 | BARELY ANY MERISTEM 1 | chr5:26281826-26284945 FORWARD LENGTH=1003)

HSP 1 Score: 53.9138 bits (128), Expect = 1.966e-9
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0

Query:   48 SAIVYRRAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            + IVY+  + N G+ +AVK+L +    SS D    AEI TLG+ RH +IV+L  FC + ++NLL
Sbjct:  705 AGIVYKGVMPN-GDLVAVKRLAAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLL 767

[Close]

Query:   48 SAIVYRRAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            + IVY+  + N G+ +AVK+L +    SS D    AEI TLG+ RH +IV+L  FC + ++NLL
Sbjct:  705 AGIVYKGVMPN-GDLVAVKRLAAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLL 767

[Close]

BLAST of evm.Ca_v2.0_10417 vs. Araport11
Match: | (Symbols: BAM2 | BARELY ANY MERISTEM 2 | chr3:18417741-18420836 FORWARD LENGTH=1002)

HSP 1 Score: 51.2174 bits (121), Expect = 1.571e-8
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 0

Query:   48 SAIVYRRAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            + IVY+  +   G+ +AVK+L +    SS D    AEI TLG+ RH +IV+L  FC + ++NLL
Sbjct:  701 AGIVYKGTMPK-GDLVAVKRLATMSHGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLL 763

[Close]

BLAST of evm.Ca_v2.0_10417 vs. Araport11
Match: | (Symbols: RGI5 | RGF1 INSENSITIVE 5 | chr1:12417331-12421246 REVERSE LENGTH=1072)

HSP 1 Score: 50.8322 bits (120), Expect = 2.880e-8
Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 0

Query:   48 SAIVYRRAVTNDGEFIAVKKL-----NSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            S IVY+  + N G+ +AVKKL     N+  G S+ID S  AEI  LG  RH NIVKL  +C ++   LL
Sbjct:  783 SGIVYKAEIPN-GDIVAVKKLWKTKDNNEEGESTID-SFAAEIQILGNIRHRNIVKLLGYCSNKSVKLL 849

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SHI2|Y1723_ARATH (Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana OX=3702 GN=At1g17230 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.466e-17
Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 0

Query:   54 RAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            +A  + GE IAVKKLNSRG  +S D S  AEISTLGK RH NIVKL+ FC+H++SNLL
Sbjct:  815 KAEMSGGEVIAVKKLNSRGEGASSDNSFRAEISTLGKIRHRNIVKLYGFCYHQNSNLL 872

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LVP0|Y5639_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS=Arabidopsis thaliana OX=3702 GN=At5g63930 PE=1 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 3.210e-10
Identity = 33/61 (54.10%), Postives = 39/61 (63.93%), Query Frame = 0

Query:   54 RAVTNDGEFIAVKKLNSR---GGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            +AV   G  +AVKKL S    G  +++D S  AEI TLG  RH NIVKLH FC H+ SNLL
Sbjct:  820 KAVLPAGYTLAVKKLASNHEGGNNNNVDNSFRAEILTLGNIRHRNIVKLHGFCNHQGSNLL 880

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy Swiss-Prot (2024)
Match: sp|O65440|BAME3_ARATH (Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3)

HSP 1 Score: 56.6102 bits (135), Expect = 2.577e-9
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 0

Query:   49 AIVYRRAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
             IVY+  + N GE +AVKKL +    SS D  + AEI TLG+ RH NIV+L  FC ++D NLL
Sbjct:  722 GIVYKGVMPN-GEEVAVKKLLTITKGSSHDNGLAAEIQTLGRIRHRNIVRLLAFCSNKDVNLL 783

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy Swiss-Prot (2024)
Match: sp|O49545|BAME1_ARATH (Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 1.945e-8
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0

Query:   48 SAIVYRRAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            + IVY+  + N G+ +AVK+L +    SS D    AEI TLG+ RH +IV+L  FC + ++NLL
Sbjct:  705 AGIVYKGVMPN-GDLVAVKRLAAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLL 767

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9M2Z1|BAME2_ARATH (Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 OS=Arabidopsis thaliana OX=3702 GN=BAM2 PE=1 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 1.554e-7
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 0

Query:   48 SAIVYRRAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            + IVY+  +   G+ +AVK+L +    SS D    AEI TLG+ RH +IV+L  FC + ++NLL
Sbjct:  701 AGIVYKGTMPK-GDLVAVKRLATMSHGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLL 763

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy Swiss-Prot (2024)
Match: sp|C0LGF5|RGI5_ARATH (LRR receptor-like serine/threonine-protein kinase RGI5 OS=Arabidopsis thaliana OX=3702 GN=RGI5 PE=1 SV=2)

HSP 1 Score: 50.8322 bits (120), Expect = 2.849e-7
Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 0

Query:   48 SAIVYRRAVTNDGEFIAVKKL-----NSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            S IVY+  + N G+ +AVKKL     N+  G S+ID S  AEI  LG  RH NIVKL  +C ++   LL
Sbjct:  783 SGIVYKAEIPN-GDIVAVKKLWKTKDNNEEGESTID-SFAAEIQILGNIRHRNIVKLLGYCSNKSVKLL 849

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy Swiss-Prot (2024)
Match: sp|P0DL10|TD1_MAIZE (Leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 OS=Zea mays OX=4577 GN=TD1 PE=2 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 5.438e-7
Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 0

Query:   48 SAIVYRRAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            + IVY   VT  G  +A+K+L  RG     DR   AE++TLG+ RH NIV+L  F  + ++NLL
Sbjct:  714 AGIVYH-GVTRGGAELAIKRLVGRGCGDH-DRGFTAEVTTLGRIRHRNIVRLLGFVSNREANLL 775

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5Z9N5|FON1_ORYSJ (Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 OS=Oryza sativa subsp. japonica OX=39947 GN=FON1 PE=1 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 5.933e-7
Identity = 29/64 (45.31%), Postives = 40/64 (62.50%), Query Frame = 0

Query:   48 SAIVYRRAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            + IVY   VT   E +A+K+L  RGG    DR   AE++TLG+ RH NIV+L  F  + ++NLL
Sbjct:  715 AGIVYH-GVTRGAE-LAIKRLVGRGGGEH-DRGFSAEVTTLGRIRHRNIVRLLGFVSNRETNLL 775

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q7Y1H3|A0A3Q7Y1H3_CICAR (Uncharacterized protein LOC113787060 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC113787060 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.818e-29
Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0

Query:    1 MDLEEHSRTEESDFELLKKALTIDNQKDNKQMANDSEETKLMTRNKWSAIVYRRA 55
            MDLEEHSRTEESDFELLKKALTIDNQKDNKQMANDSEETKLMTRNKWS IVYRR 
Sbjct:   10 MDLEEHSRTEESDFELLKKALTIDNQKDNKQMANDSEETKLMTRNKWSTIVYRRG 64

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q7YD82|A0A3Q7YD82_CICAR (Uncharacterized protein LOC101491003 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101491003 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.494e-25
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0

Query:    1 MDLEEHSRTEESDFELLKKALTIDNQKDNKQMANDSEETKLMTRNKWSAIVYRRA 55
            MDLEEHS TEESDFELLKKAL IDNQ+DNKQMANDSEETKLMTRNKWSAIVYRR 
Sbjct:  362 MDLEEHSGTEESDFELLKKALIIDNQEDNKQMANDSEETKLMTRNKWSAIVYRRG 416

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3E055|A0A1S3E055_CICAR (Uncharacterized protein LOC101491003 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101491003 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 9.792e-24
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0

Query:    1 MDLEEHSRTEESDFELLKKALTIDNQKDNKQMANDSEETKLMTRNKWSAIVYRRA 55
            MDLEEHS TEESDFELLKKAL IDNQ+DNKQMANDSEETKLMTRNKWSAIVYRR 
Sbjct:  466 MDLEEHSGTEESDFELLKKALIIDNQEDNKQMANDSEETKLMTRNKWSAIVYRRG 520

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy TrEMBL (2024)
Match: tr|A0A392PNB1|A0A392PNB1_9FABA (Leucine-rich repeat receptor-like serine/threonine-protein kinase (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.079e-23
Identity = 47/59 (79.66%), Postives = 51/59 (86.44%), Query Frame = 0

Query:   54 RAVTNDGEFIAVKKLNSRGG-ASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            RAV NDGE IAVKKLN+RGG  +S+DRS LAEISTLGK RH NIVKLH FC+HEDSNLL
Sbjct:    7 RAVMNDGEVIAVKKLNTRGGEGTSVDRSFLAEISTLGKIRHRNIVKLHGFCYHEDSNLL 65

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3MCU3|A0A2K3MCU3_TRIPR (SET domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g044708 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 8.549e-23
Identity = 46/55 (83.64%), Postives = 50/55 (90.91%), Query Frame = 0

Query:    1 MDLEEHSRTEESDFELLKKALTIDNQKDNKQMANDSEETKLMTRNKWSAIVYRRA 55
            MDLEEHS TEESD ELLKKAL ID+Q+D+KQMAN+S ETKLMTRNKWSAIVYRR 
Sbjct:   43 MDLEEHSGTEESDSELLKKALIIDSQEDSKQMANESAETKLMTRNKWSAIVYRRG 97

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q7YBM0|A0A3Q7YBM0_CICAR (Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101489235 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 3.554e-22
Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 0

Query:   54 RAVTNDGEFIAVKKLNSRG-GASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            +AV NDGEFIAVKKLNSRG GASSIDRS  AEISTLGK RH NIVKLH FCFHEDSNLL
Sbjct:  781 KAVMNDGEFIAVKKLNSRGEGASSIDRSFFAEISTLGKIRHRNIVKLHGFCFHEDSNLL 839

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XFT9|A0A1S2XFT9_CICAR (Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101489235 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.120e-22
Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 0

Query:   54 RAVTNDGEFIAVKKLNSRG-GASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLL 111
            +AV NDGEFIAVKKLNSRG GASSIDRS  AEISTLGK RH NIVKLH FCFHEDSNLL
Sbjct:  822 KAVMNDGEFIAVKKLNSRGEGASSIDRSFFAEISTLGKIRHRNIVKLHGFCFHEDSNLL 880

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy TrEMBL (2024)
Match: tr|A0A072UBX0|A0A072UBX0_MEDTR (SET domain protein OS=Medicago truncatula OX=3880 GN=11427499 PE=4 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 8.402e-22
Identity = 47/55 (85.45%), Postives = 51/55 (92.73%), Query Frame = 0

Query:    1 MDLEEHSRTEESDFELLKKALTIDNQKDNKQMANDSEETKLMTRNKWSAIVYRRA 55
            MDLEEHS TEE+DFELLKKAL ID+Q+D+KQMANDSEET LMTRNKWSAIVYRR 
Sbjct:  406 MDLEEHSGTEENDFELLKKALIIDSQEDSKQMANDSEETTLMTRNKWSAIVYRRG 460

[Close]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy TrEMBL (2024)
Match: tr|G7L2K0|G7L2K0_MEDTR (Putative methyltransferase transcription regulator SET family OS=Medicago truncatula OX=3880 GN=11427499 PE=4 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 8.707e-22
Identity = 47/55 (85.45%), Postives = 51/55 (92.73%), Query Frame = 0

Query:    1 MDLEEHSRTEESDFELLKKALTIDNQKDNKQMANDSEETKLMTRNKWSAIVYRRA 55
            MDLEEHS TEE+DFELLKKAL ID+Q+D+KQMANDSEET LMTRNKWSAIVYRR 
Sbjct:  466 MDLEEHSGTEENDFELLKKALIIDSQEDSKQMANDSEETTLMTRNKWSAIVYRRG 520

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BLAST of evm.Ca_v2.0_10417 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6NHA6|A0A2Z6NHA6_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_179460 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.259e-20
Identity = 47/55 (85.45%), Postives = 51/55 (92.73%), Query Frame = 0

Query:    1 MDLEEHSRTEESDFELLKKALTIDNQKDNKQMANDSEETKLMTRNKWSAIVYRRA 55
            MDLEEHS T+ESD ELLKKAL ID+Q+D+KQMANDSEETKLMTRNKWSAIVYRR 
Sbjct:  384 MDLEEHSGTDESDSELLKKALIIDSQEDSKQMANDSEETKLMTRNKWSAIVYRRG 438

The following BLAST results are available for this feature:

BLAST of evm.Ca_v2.0_10417 vs. Araport11
BLAST of evm.Ca_v2.0_10417 vs. ExPASy Swiss-Prot (2024)
BLAST of evm.Ca_v2.0_10417 vs. ExPASy TrEMBL (2024)

BLAST of evm.Ca_v2.0_10417 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11)
Total hits: 10


Match Name	E-value	Identity	Description
\|	7.416e-18	65.52	Symbols: no symbol available \| no full name availa...	[more]
\|	8.557e-18	65.52	Symbols: no symbol available \| no full name availa...	[more]
\|	8.570e-18	65.52	Symbols: no symbol available \| no full name availa...	[more]
\|	2.715e-11	54.10	Symbols: no symbol available \| no full name availa...	[more]
\|	3.245e-11	54.10	Symbols: no symbol available \| no full name availa...	[more]
\|	2.605e-10	50.79	Symbols: BAM3 \| BARELY ANY MERISTEM 3 \| chr4:10949...	[more]
\|	1.966e-9	43.75	Symbols: BAM1 \| BARELY ANY MERISTEM 1 \| chr5:26281...	[more]
\|	1.966e-9	43.75	Symbols: BAM1 \| BARELY ANY MERISTEM 1 \| chr5:26281...	[more]
\|	1.571e-8	42.19	Symbols: BAM2 \| BARELY ANY MERISTEM 2 \| chr3:18417...	[more]
\|	2.880e-8	46.38	Symbols: RGI5 \| RGF1 INSENSITIVE 5 \| chr1:12417331...	[more]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot )
Total hits: 8


Match Name	E-value	Identity	Description
sp\|Q9SHI2\|Y1723_ARATH	8.466e-17	65.52	Leucine-rich repeat receptor-like serine/threonine...	[more]
sp\|Q9LVP0\|Y5639_ARATH	3.210e-10	54.10	Probable leucine-rich repeat receptor-like protein...	[more]
sp\|O65440\|BAME3_ARATH	2.577e-9	50.79	Leucine-rich repeat receptor-like serine/threonine...	[more]
sp\|O49545\|BAME1_ARATH	1.945e-8	43.75	Leucine-rich repeat receptor-like serine/threonine...	[more]
sp\|Q9M2Z1\|BAME2_ARATH	1.554e-7	42.19	Leucine-rich repeat receptor-like serine/threonine...	[more]
sp\|C0LGF5\|RGI5_ARATH	2.849e-7	46.38	LRR receptor-like serine/threonine-protein kinase ...	[more]
sp\|P0DL10\|TD1_MAIZE	5.438e-7	43.75	Leucine-rich repeat receptor-like kinase protein T...	[more]
sp\|Q5Z9N5\|FON1_ORYSJ	5.933e-7	45.31	Leucine-rich repeat receptor-like kinase protein F...	[more]

BLAST of evm.Ca_v2.0_10417 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A3Q7Y1H3\|A0A3Q7Y1H3_CICAR	1.818e-29	96.36	Uncharacterized protein LOC113787060 isoform X2 OS...	[more]
tr\|A0A3Q7YD82\|A0A3Q7YD82_CICAR	9.494e-25	92.73	Uncharacterized protein LOC101491003 isoform X2 OS...	[more]
tr\|A0A1S3E055\|A0A1S3E055_CICAR	9.792e-24	92.73	Uncharacterized protein LOC101491003 isoform X1 OS...	[more]
tr\|A0A392PNB1\|A0A392PNB1_9FABA	3.079e-23	79.66	Leucine-rich repeat receptor-like serine/threonine...	[more]
tr\|A0A2K3MCU3\|A0A2K3MCU3_TRIPR	8.549e-23	83.64	SET domain-containing protein OS=Trifolium pratens...	[more]
tr\|A0A3Q7YBM0\|A0A3Q7YBM0_CICAR	3.554e-22	86.44	Leucine-rich repeat receptor-like serine/threonine...	[more]
tr\|A0A1S2XFT9\|A0A1S2XFT9_CICAR	4.120e-22	86.44	Leucine-rich repeat receptor-like serine/threonine...	[more]
tr\|A0A072UBX0\|A0A072UBX0_MEDTR	8.402e-22	85.45	SET domain protein OS=Medicago truncatula OX=3880 ...	[more]
tr\|G7L2K0\|G7L2K0_MEDTR	8.707e-22	85.45	Putative methyltransferase transcription regulator...	[more]
tr\|A0A2Z6NHA6\|A0A2Z6NHA6_TRISU	1.259e-20	85.45	Uncharacterized protein OS=Trifolium subterraneum ...	[more]

InterPro

Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.200.20	Phosphorylase Kinase; domain 1	coord: 2..112 e-value: 8.9E-12 score: 46.7
None	No IPR available	PIRSR	PIRSR637770-2	PIRSR637770-2	coord: 49..107 e-value: 6.8E-7 score: 21.3
None	No IPR available	PIRSR	PIRSR038189-2	PIRSR038189-2	coord: 50..103 e-value: 2.5E-4 score: 13.1
None	No IPR available	PIRSR	PIRSR628788-2	PIRSR628788-2	coord: 46..104 e-value: 4.1E-4 score: 12.1
IPR051420	Ser/Thr Protein Kinases with Diverse Regulatory Roles	PANTHER	PTHR48005	LEUCINE RICH REPEAT KINASE 2	coord: 50..111
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 49..108

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Ca4_v2.0:24420934..24421778+
coding sequence from alignment at Ca4_v2.0:24420934..24421778+

mRNA sequence

>drCicArie.Frontier.2.0.Ca_v2.0_10417.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_10417.1; Name=evm.Ca_v2.0_10417; organism=Cicer arietinum; type=mRNA; length=339bp
ATGGATCTTGAAGAGCATTCTAGAACAGAGGAAAGTGACTTTGAATTGCT
CAAGAAGGCTCTTACCATTGATAACCAGAAAGATAACAAACAAATGGCAA
ATGATTCAGAGGAAACAAAGTTGATGACTAGAAACAAATGGTCTGCTATA
GTATATAGGCGAGCTGTTACGAATGATGGTGAATTTATTGCTGTCAAGAA
GCTGAATTCGCGCGGAGGAGCATCGAGCATCGACCGAAGCATCTTAGCTG
AGATTTCAACTCTTGGAAAGACCAGGCACATGAACATTGTGAAGTTGCAT
GAATTCTGTTTTCATGAAGATTCTAATCTTTTATCATAG

protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_10417.1

>drCicArie.Frontier.2.0.Ca_v2.0_10417.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_10417.1; Name=drCicArie.Frontier.2.0.Ca_v2.0_10417.1; organism=Cicer arietinum; type=polypeptide; length=112bp
MDLEEHSRTEESDFELLKKALTIDNQKDNKQMANDSEETKLMTRNKWSAI
VYRRAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLH
EFCFHEDSNLLS

mRNA from alignment at Ca4_v2.0:24420934..24421778+

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>drCicArie.Frontier.2.0.Ca_v2.0_10417.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_10417.1; Name=evm.Ca_v2.0_10417; organism=Cicer arietinum; type=mRNA; length=845bp; location=Sequence derived from: Ca4_v2.0:24420934..24421778+ (Cicer arietinum
ATGGATCTTGAAGAGCATTCTAGAACAGAGGAAAGTGACTTTGAATTGCT
CAAGAAGGCTCTTACCATTGATAACCAGAAAGATAACAAACAGTATGCAA
TTAGAAATCTTCACTCTTGCAATTTATAACACAATTATCAAATTTGATTT
CAACACTATGCATTGCACTTTCTAACACCTTTTTCTTAATTTCCTTTGAT
CAGAATGGCAAATGATTCAGAGGAAACAAAGTTGATGACTAGAAACAAAT
GGTCTGCTATAGTATATAGGCGAGGTCAGAAGCAGCTAACTCGATTATTC
TTGAAAGAAGCAGAACATGCTCTGCAGTTATCAATGACTGAAGAGATGAG
TGTTCCTTGATAACCATGTCATTTTTCAAAGTCCTCTTTCTTGTTACCTG
ATCTTTAGTCCAAGTTAGATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTTTTGTTTCTC
TTATTTTCATTGTGGTTTTGTTTCTCTTATTTTCATTGTGGTTTTGTTTC
TCTTATTTTCATTGTGGTTTTGTTTCTCTTATTTTCATTGTGGTTTTGTT
TCTCTTATTCTCTTATTTCTCTTAATCTGAAGTTGTAGAATCTGAAGTTC
TATTTGGTGTCCTACAAAGCTGTTACGAATGATGGTGAATTTATTGCTGT
CAAGAAGCTGAATTCGCGCGGAGGAGCATCGAGCATCGACCGAAGCATCT
TAGCTGAGATTTCAACTCTTGGAAAGACCAGGCACATGAACATTGTGAAG
TTGCATGAATTCTGTTTTCATGAAGATTCTAATCTTTTATCATAG

Coding sequence (CDS) from alignment at Ca4_v2.0:24420934..24421778+

>drCicArie.Frontier.2.0.Ca_v2.0_10417.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_10417.1; Name=evm.Ca_v2.0_10417; organism=Cicer arietinum; type=CDS; length=339bp; location=Sequence derived from: Ca4_v2.0:24420934..24421778+ (Cicer arietinum
ATGGATCTTGAAGAGCATTCTAGAACAGAGGAAAGTGACTTTGAATTGCT
CAAGAAGGCTCTTACCATTGATAACCAGAAAGATAACAAACAAATGGCAA
ATGATTCAGAGGAAACAAAGTTGATGACTAGAAACAAATGGTCTGCTATA
GTATATAGGCGAGCTGTTACGAATGATGGTGAATTTATTGCTGTCAAGAA
GCTGAATTCGCGCGGAGGAGCATCGAGCATCGACCGAAGCATCTTAGCTG
AGATTTCAACTCTTGGAAAGACCAGGCACATGAACATTGTGAAGTTGCAT
GAATTCTGTTTTCATGAAGATTCTAATCTTTTATCATAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR051420	Ser_Thr_Kinases_DiverseReg
IPR011009	Kinase-like_dom_sf

Search form

evm.Ca_v2.0_10417