evm.Ca_v2.0_07497

Transcript Overview
Nameevm.Ca_v2.0_07497
Unique NamedrCicArie.Frontier.2.0.Ca_v2.0_07497.1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length936
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca3_v2.0chromosomeCa3_v2.0:68979697..68980729 +Cicer arietinum cv. CDC Frontier genome v2.0n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
evm.Ca_v2.0_07497drCicArie.Frontier.2.0.Ca_v2.0_07497Cicer arietinumgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.cds.Ca_v2.0_07497.1drCicArie.Frontier.2.0.cds.Ca_v2.0_07497.1Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_07497.1drCicArie.Frontier.2.0.cds.Ca_v2.0_07497.1_2Cicer arietinumCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_07497.1.exon1drCicArie.Frontier.2.0.Ca_v2.0_07497.1.exon1Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_07497.1.exon2drCicArie.Frontier.2.0.Ca_v2.0_07497.1.exon2Cicer arietinumexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_07497.1drCicArie.Frontier.2.0.Ca_v2.0_07497.1Cicer arietinumpolypeptide
drCicArie.Frontier.2.0.Ca_v2.0_07497.1drCicArie.Frontier.2.0.Ca_v2.0_07497.1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of evm.Ca_v2.0_07497 vs. Araport11
Match: | (Symbols: H1.2, HON2 | Histone 1.2 | chr2:13045360-13046267 FORWARD LENGTH=273)

HSP 1 Score: 133.265 bits (334), Expect = 9.066e-37
Identity = 127/250 (50.80%), Postives = 146/250 (58.40%), Query Frame = 0 
Query:   53 RTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLPSVKSSAPKPAKKPVAAKPKPKAKPAAKSKPAAAKSKAAPAKAKPAATKAKPAAKAKPAAKPAVKPKPAANARPPVAKARAAPVVKAKPAAKAKPAAKPKAKPAAKPKAAAAAKAKPAAKAKAVKSPAKSSRTSTRTSPGRRAAAPKPVAAKKATTPVKKAPARAAAKGKTAKSPAKK 302
            +T  +HP YEEMIKDAI+TLKE+ GSSQYAI KF+EEKHK LP  FRK+LLV  K+LVAS KLVKVK SFK+PS +S          AA PKP                AAP K K A   AKP  K   A  PA     A   + P AK  A   V AKP AK   AAKPK+K  A    A +     AAK KA + PAK+SRTSTRTSPG++ AAP   A K A T  KKAPA++       KSPAK+
Sbjct:   57 KTTSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARS----------AATPKP----------------AAPVK-KKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKVVAKAKVTAKPKAKV-TAAKPKSKSVA----AVSKTKAVAAKPKAKERPAKASRTSTRTSPGKKVAAP---AKKVAVT--KKAPAKSVK----VKSPAKR 265
[Close]
BLAST of evm.Ca_v2.0_07497 vs. Araport11
Match: | (Symbols: H1.2, HON2 | Histone 1.2 | chr2:13045360-13046267 FORWARD LENGTH=202)

HSP 1 Score: 129.413 bits (324), Expect = 4.260e-36
Identity = 79/131 (60.31%), Postives = 94/131 (71.76%), Query Frame = 0 
Query:   53 RTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLPSVKSSA-PKPA-----KKPVAAKPKPKAKPAAKSKPAAAKSKAAPAKAKPAATKAKPA 177
            +T  +HP YEEMIKDAI+TLKE+ GSSQYAI KF+EEKHK LP  FRK+LLV  K+LVAS KLVKVK SFK+PS +S+A PKPA     K  V AKPK  ++ + ++ P   K  AAPAK K A TK  PA
Sbjct:   57 KTTSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPAAPVKKKATVVAKPKA-SRTSTRTSP--GKKVAAPAK-KVAVTKKAPA 183
[Close]
BLAST of evm.Ca_v2.0_07497 vs. Araport11
Match: | (Symbols: HON3, HIS1-3 | histone H1-3 | chr2:7846095-7846670 FORWARD LENGTH=167)

HSP 1 Score: 95.5153 bits (236), Expect = 1.094e-23
Identity = 53/87 (60.92%), Postives = 63/87 (72.41%), Query Frame = 0 
Query:   39 KKAPKEPKPRKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQ-LPSNFRKILLVQSKKLVASGKLVKVKGSFKL 124
            KK P   KPRKP   T   HPPY +MIK+A++ LKEKNGSS YAIAK +EEKHK  LP +FRK L +Q K  VA GKLVK++ S+KL
Sbjct:    8 KKTPAAKKPRKPKTTT---HPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASYKL 91
[Close]
BLAST of evm.Ca_v2.0_07497 vs. Araport11
Match: | (Symbols: HON3, HIS1-3 | histone H1-3 | chr2:7846254-7846670 FORWARD LENGTH=138)

HSP 1 Score: 77.0258 bits (188), Expect = 3.784e-17
Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 0 
Query:   64 MIKDAILTLKEKNGSSQYAIAKFLEEKHKQ-LPSNFRKILLVQSKKLVASGKLVKVKGSFKL 124
            MIK+A++ LKEKNGSS YAIAK +EEKHK  LP +FRK L +Q K  VA GKLVK++ S+KL
Sbjct:    1 MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASYKL 62
[Close]
BLAST of evm.Ca_v2.0_07497 vs. Araport11
Match: | (Symbols: H1.1, HON1 | Histone 1.1 | chr1:2076687-2077616 REVERSE LENGTH=274)

HSP 1 Score: 58.151 bits (139), Expect = 1.605e-9
Identity = 78/176 (44.32%), Postives = 91/176 (51.70%), Query Frame = 0 
Query:   53 RTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLPSVKSSAPKPAKKPVAAKPKPKAKPAAKSKPAAAKSKAAPAKAKPAATKAKPAAKAKPAAKPAVKPKPAANARPPVAKARAAPVVKAKPAAKAKPAAKPKAKPA 228
            RT  +HP YEEMIKDAI+TLKE+ GSSQYAI KF+EEK K+LP  FRK+LL+  K+LVASG         KL  VK+S             K  +  A  S P AA  K+APAK KPA                 V    A       +KA+    VK K AA  K  AK KAKP 
Sbjct:   57 RTVSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASG---------KLVKVKASF------------KLPSASAKASSPKAAAEKSAPAKKKPAT----------------VAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAKPV 195
[Close]
BLAST of evm.Ca_v2.0_07497 vs. Araport11
Match: | (Symbols: HMGA | high mobility group A | chr1:5138665-5139353 REVERSE LENGTH=204)

HSP 1 Score: 54.6842 bits (130), Expect = 1.274e-8
Identity = 23/68 (33.82%), Postives = 40/68 (58.82%), Query Frame = 0 
Query:   59 PPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLPS 126
            PPY +MI +AI +L +KNG ++  IAK +E   + LP +   +L     ++  +G+L+ VK ++  P 
Sbjct:   24 PPYPQMIMEAIESLNDKNGCNKTTIAKHIESTQQTLPPSHMTLLSYHLNQMKKTGQLIMVKNNYMKPD 91
[Close]
BLAST of evm.Ca_v2.0_07497 vs. Araport11
Match: | (Symbols: HON4 | | chr3:6170309-6171558 REVERSE LENGTH=387)

HSP 1 Score: 54.6842 bits (130), Expect = 4.253e-8
Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 0 
Query:   58 HPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKL 124
            HPPY EMI  AI  L E +GSS+ AI++++E  +  L S    +L    K L  SG L  VK S+K+
Sbjct:   65 HPPYSEMICAAIAALNEPDGSSKMAISRYIERCYTGLTSAHAALLTHHLKTLKTSGVLSMVKKSYKI 131
[Close]
BLAST of evm.Ca_v2.0_07497 vs. Araport11
Match: | (Symbols: HON4 | | chr3:6169384-6171558 REVERSE LENGTH=480)

HSP 1 Score: 54.299 bits (129), Expect = 5.059e-8
Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 0 
Query:   58 HPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKL 124
            HPPY EMI  AI  L E +GSS+ AI++++E  +  L S    +L    K L  SG L  VK S+K+
Sbjct:   65 HPPYSEMICAAIAALNEPDGSSKMAISRYIERCYTGLTSAHAALLTHHLKTLKTSGVLSMVKKSYKI 131
[Close]
BLAST of evm.Ca_v2.0_07497 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:27380499-27382687 REVERSE LENGTH=281)

HSP 1 Score: 51.9878 bits (123), Expect = 2.102e-7
Identity = 29/79 (36.71%), Postives = 47/79 (59.49%), Query Frame = 0 
Query:   59 PPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLPS---VKSSAPKP 134
            P Y+ +I +A+  L + NGS   +I  F+E +H ++P NFR+IL  + ++L A  KL K++  +K+P     K   PKP
Sbjct:  121 PRYDGVIFEALSALADGNGSDVSSIYHFIEPRH-EVPPNFRRILSTRLRRLAAQSKLEKIQNFYKIPDPSGTKIGVPKP 198
[Close]
BLAST of evm.Ca_v2.0_07497 vs. Araport11
Match: | (Symbols: HON5 | high mobility group A5 | chr1:17974148-17976301 REVERSE LENGTH=479)

HSP 1 Score: 51.2174 bits (121), Expect = 5.755e-7
Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 0 
Query:   61 YEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKL 124
            Y +MI  AI  L E +GSS+ AI++++E  +  +P+    +L    K L  SG LV VK S+KL
Sbjct:   78 YSDMICTAIAALNEPDGSSKQAISRYIERIYTGIPTAHGALLTHHLKTLKTSGILVMVKKSYKL 141
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy Swiss-Prot (2024)
Match: sp|P26569|H12_ARATH (Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 8.756e-36
Identity = 127/250 (50.80%), Postives = 146/250 (58.40%), Query Frame = 0 
Query:   53 RTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLPSVKSSAPKPAKKPVAAKPKPKAKPAAKSKPAAAKSKAAPAKAKPAATKAKPAAKAKPAAKPAVKPKPAANARPPVAKARAAPVVKAKPAAKAKPAAKPKAKPAAKPKAAAAAKAKPAAKAKAVKSPAKSSRTSTRTSPGRRAAAPKPVAAKKATTPVKKAPARAAAKGKTAKSPAKK 302
            +T  +HP YEEMIKDAI+TLKE+ GSSQYAI KF+EEKHK LP  FRK+LLV  K+LVAS KLVKVK SFK+PS +S          AA PKP                AAP K K A   AKP  K   A  PA     A   + P AK  A   V AKP AK   AAKPK+K  A    A +     AAK KA + PAK+SRTSTRTSPG++ AAP   A K A T  KKAPA++       KSPAK+
Sbjct:   57 KTTSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARS----------AATPKP----------------AAPVK-KKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKVVAKAKVTAKPKAKV-TAAKPKSKSVA----AVSKTKAVAAKPKAKERPAKASRTSTRTSPGKKVAAP---AKKVAVT--KKAPAKSVK----VKSPAKR 265
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy Swiss-Prot (2024)
Match: sp|P08283|H1_PEA (Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.098e-30
Identity = 75/129 (58.14%), Postives = 91/129 (70.54%), Query Frame = 0 
Query:    1 MASEDPTVAVE---QPIAEEPAAVDTLPPVVNESDEPAAKPKKAPKEPKPRKPAA--RTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKL 124
            MA+E+P VAVE   +PI  EP  + T P V  + +  A   K    +    K A+  R P +HP YEEMIKDAI++LKEKNGSSQYAIAKF+EEK KQLP+NF+K+LL   KK VASGKL+KVKGSFKL
Sbjct:    1 MATEEPIVAVETVPEPIVTEPTTI-TEPEVPEKEEPKAEVEKTKKAKGSKPKKASKPRNPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVASGKLIKVKGSFKL 128
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy Swiss-Prot (2024)
Match: sp|P37218|H1_SOLLC (Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.682e-26
Identity = 77/131 (58.78%), Postives = 93/131 (70.99%), Query Frame = 0 
Query:    1 MASEDPTVAVEQPIAEEPAAVDTLPPVVNESDEPA-----AKPKKAPKEPKPRKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLPS 126
            MA+E+P +  E  + EE AA +T   V +E++ PA      K  KA K   PRK +A TP THPPY EMIKDAI+TLKE+ GSSQ+AI KF+EEK K LPSNF+K+LL Q KK VAS KLVKVK S+KLPS
Sbjct:    1 MATEEPVIVNE--VVEEQAAPET---VKDEANPPAKSGKAKKETKAKKPAAPRKRSA-TP-THPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKNSYKLPS 124
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy Swiss-Prot (2024)
Match: sp|P27806|H1_WHEAT (Histone H1 OS=Triticum aestivum OX=4565 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.363e-24
Identity = 51/81 (62.96%), Postives = 61/81 (75.31%), Query Frame = 0 
Query:   45 PKPRKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHK-QLPSNFRKILLVQSKKLVASGKLVKVKGSFKL 124
            P P+KP  R    HP Y EM+ +AI  LKE++GSS  AI KF+E+KHK  LP+NFRKILL Q KKLVA+GKL KVKGS+KL
Sbjct:   44 PGPKKP--RVTPAHPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSYKL 122
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy Swiss-Prot (2024)
Match: sp|P40267|H1_SOLPN (Histone H1 OS=Solanum pennellii OX=28526 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.833e-24
Identity = 49/86 (56.98%), Postives = 65/86 (75.58%), Query Frame = 0 
Query:   40 KAPKEPKPRKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHK-QLPSNFRKILLVQSKKLVASGKLVKVKGSFKL 124
            K P+ PK +KP +    THPPY +MIK+A+L L EK GSS YA+AK++E+KHK +LP+NFRKIL +Q K   A GKL+K+K S+KL
Sbjct:   31 KKPRAPKEKKPKSAKAVTHPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKL 116
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9M5W4|H1_EUPES (Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.384e-24
Identity = 53/76 (69.74%), Postives = 62/76 (81.58%), Query Frame = 0 
Query:   48 RKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFK 123
            +KP ++   +HP + EMI DAI TLKE+ GSSQYAI KF+E+KHKQLPSNFRK+LL   KKLVASGKLVKVK SFK
Sbjct:   41 KKPKSKGTSSHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKNSFK 116
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q08864|H11_VOLCA (Histone H1-I OS=Volvox carteri OX=3067 GN=H1-I PE=2 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 2.322e-18
Identity = 53/95 (55.79%), Postives = 59/95 (62.11%), Query Frame = 0 
Query:   57 THPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKH-KQLPS-NFRKILLVQSKKLVASGKLVKVKGSFKLPS-----VKSSAPKPAKKPVAAKPK 144
            THPPY EM+KDAI TLKE+NGSS  A+ KF+E K+ K +   NF K L    K  V  GKLVKVKGSFKL        K S PK AK    AKPK
Sbjct:   58 THPPYIEMVKDAITTLKERNGSSLPALKKFIENKYGKDIHDKNFAKTLSQVVKTFVKGGKLVKVKGSFKLSEALKAKAKKSTPKKAKADGEAKPK 152
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q08865|H12_VOLCA (Histone H1-II OS=Volvox carteri OX=3067 GN=H1-II PE=2 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.040e-12
Identity = 44/93 (47.31%), Postives = 60/93 (64.52%), Query Frame = 0 
Query:   40 KAPKEPKPRKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSN--FRKILLVQSKKLVASGKLVKVKGSFKLPSVKSS 130
            KAPK    +KP  +T  THPPY +M+ DAIL+LKE++GSS  A+ KF+E K+ +   +  F K L +  K  V +GKLVKVK S+KL   + S
Sbjct:    9 KAPKAKTQKKP--KTAPTHPPYIQMVTDAILSLKERDGSSLPALKKFIEAKYGKDIHDKKFPKTLSLALKTFVKNGKLVKVKNSYKLSDAQKS 99
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy Swiss-Prot (2024)
Match: sp|P54671|H1_DICDI (Histone H1 OS=Dictyostelium discoideum OX=44689 GN=H1 PE=1 SV=3)

HSP 1 Score: 64.6994 bits (156), Expect = 3.284e-11
Identity = 36/87 (41.38%), Postives = 47/87 (54.02%), Query Frame = 0 
Query:   58 HPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLPSVKSSAPKPAKKPVAAKPK 144
            HP Y+ MI  AI   K++ GSSQ AI K++E  +   P  F+  L +  K+LVA G L  VK S+KL        +    PVA KPK
Sbjct:   24 HPTYQVMISTAIAHYKDRTGSSQPAIIKYIEANYNVAPDTFKTQLKLALKRLVAKGTLTMVKASYKLSEEGKKEHQATLGPVAKKPK 110
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy Swiss-Prot (2024)
Match: sp|P26568|H11_ARATH (Histone H1.1 OS=Arabidopsis thaliana OX=3702 GN=At1g06760 PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.577e-8
Identity = 78/176 (44.32%), Postives = 91/176 (51.70%), Query Frame = 0 
Query:   53 RTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLPSVKSSAPKPAKKPVAAKPKPKAKPAAKSKPAAAKSKAAPAKAKPAATKAKPAAKAKPAAKPAVKPKPAANARPPVAKARAAPVVKAKPAAKAKPAAKPKAKPA 228
            RT  +HP YEEMIKDAI+TLKE+ GSSQYAI KF+EEK K+LP  FRK+LL+  K+LVASG         KL  VK+S             K  +  A  S P AA  K+APAK KPA                 V    A       +KA+    VK K AA  K  AK KAKP 
Sbjct:   57 RTVSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASG---------KLVKVKASF------------KLPSASAKASSPKAAAEKSAPAKKKPAT----------------VAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAKPV 195
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XS87|A0A1S2XS87_CICAR (Histone H1-like OS=Cicer arietinum OX=3827 GN=LOC101507794 PE=3 SV=1)

HSP 1 Score: 538.495 bits (1386), Expect = 0.000e+0
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0 
Query:    1 MASEDPTVAVEQPIAEEPAAVDTLPPVVNESDEPAAKPKKAPKEPKPRKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLPSVKSSAPKPAKKPVAAKPKPKAKPAAKSKPAAAKSKAAPAKAKPAATKAKPAAKAKPAAKPAVKPKPAANARPPVAKARAAPVVKAKPAAKAKPAAKPKAKPAAKPKAAAAAKAKPAAKAKAVKSPAKSSRTSTRTSPGRRAAAPKPVAAKKATTPVKKAPARAAAKGKTAKSPAKKTPAKRGGRK 311
            MASEDPTVAVEQPIAEEPAAVDTLPPVVNESDEPAAKPKKAPKEPKPRKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLPSVKSSAPKPAKKPVAAKPKPKAKPAAKSKPAAAKSKAAPAKAKPAATKAKPAAKAKPAAKPAVKPKPAANARPPVAKARAAPVVKAKPAAKAKPAAKPKAKPAAKPKAAAAAKAKPAAKAKAVKSPAKSSRTSTRTSPGRRAAAPKPVAAKKATTPVKKAPARAAAKGKTAKSPAKKTPAKRGGRK
Sbjct:    1 MASEDPTVAVEQPIAEEPAAVDTLPPVVNESDEPAAKPKKAPKEPKPRKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLPSVKSSAPKPAKKPVAAKPKPKAKPAAKSKPAAAKSKAAPAKAKPAATKAKPAAKAKPAAKPAVKPKPAANARPPVAKARAAPVVKAKPAAKAKPAAKPKAKPAAKPKAAAAAKAKPAAKAKAVKSPAKSSRTSTRTSPGRRAAAPKPVAAKKATTPVKKAPARAAAKGKTAKSPAKKTPAKRGGRK 311
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy TrEMBL (2024)
Match: tr|Q9AT24|Q9AT24_PEA (Histone H1 (Fragment) OS=Pisum sativum OX=3888 GN=His1 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 3.204e-57
Identity = 98/123 (79.67%), Postives = 110/123 (89.43%), Query Frame = 0 
Query:    3 SEDPT-VAVEQPIAEEPAAVDTLPPVVNESDEPAAKPKKAPKEPKPRKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKL 124
            SE+PT VAVEQPI EEP AVDTLPPVVNES+EP AKPKKAPKE K +K  A+ PRTHP YEEM+K+AI+ LKE+NGSSQYAIAKF+EEKHKQLPSNF+K+LLVQ KKLVASGKLVKVK S+KL
Sbjct:    1 SEEPTTVAVEQPIVEEPEAVDTLPPVVNESEEPTAKPKKAPKETKAKKAPAK-PRTHPTYEEMVKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 122
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3NZ46|A0A2K3NZ46_TRIPR (Histone H1-like protein OS=Trifolium pratense OX=57577 GN=L195_g004831 PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.189e-55
Identity = 96/136 (70.59%), Postives = 106/136 (77.94%), Query Frame = 0 
Query:    1 MASEDPTVAVEQP-IAEEPAAVDTLPPVVNESDEPAAKPKKAPKEPKP----------RKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLP 125
            MASE+PTV VE+  + +E AAVDTLPPVVNESDEPAA                     RKPAA+T RTHPPYEEM+KDAI+TLKEKNGSSQYAIAKF+EEKH QLPSNF+KILLVQ KKLVAS KLVKVKGS+KLP
Sbjct:    1 MASEEPTVTVEETAVVDETAAVDTLPPVVNESDEPAADDHTTTAAAAKPKKAAKEPKPRKPAAKTARTHPPYEEMVKDAIVTLKEKNGSSQYAIAKFIEEKHNQLPSNFKKILLVQIKKLVASDKLVKVKGSYKLP 136
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1B0YTF1|A0A1B0YTF1_TRIRP (Histone H1 (Fragment) OS=Trifolium repens OX=3899 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.010e-53
Identity = 102/135 (75.56%), Postives = 109/135 (80.74%), Query Frame = 0 
Query:    3 SEDPTVAVEQPIA-EEPAAVDTLPPVVNESDEPAAKPKKAPK-----------EPKPRKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLP 125
            SEDPTVAVE+  A +E AAVDTLPPVVNESDEPAA    A             EPKPRKPAA  PRTHPPYEEM+KDAI+TLKEKNGSSQYAIAKF+EEKH QLPSNF+KILLVQ KKLVAS KLVKVKGS+KLP
Sbjct:    1 SEDPTVAVEETAAVDETAAVDTLPPVVNESDEPAADDTTAAAAAAAKPKKAAKEPKPRKPAA--PRTHPPYEEMVKDAIVTLKEKNGSSQYAIAKFIEEKHNQLPSNFKKILLVQIKKLVASDKLVKVKGSYKLP 133
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy TrEMBL (2024)
Match: tr|Q84NF8|Q84NF8_9FABA (Histone H1 (Fragment) OS=Lens nigricans OX=41258 GN=his1-1 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.503e-50
Identity = 104/133 (78.20%), Postives = 114/133 (85.71%), Query Frame = 0 
Query:    3 SEDPT-VAVEQPIAEEPAAVDTLPPVVNESDEPAAKPKKAPKEPKPRKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLPSVKSSAPKP 134
            SE+PT VAVEQPI EE AAVDTLPPVVNES+EP AKPKKA K     K A   PRTHP YEEM+KDAI++LKEKNGSSQYAIAKF+EEK KQLPSNF+K+LLVQ KKLVASGKLVKVK S+KLP+ KSSAPKP
Sbjct:    1 SEEPTTVAVEQPIVEEQAAVDTLPPVVNESEEPTAKPKKAAK-EPKAKKAPAKPRTHPTYEEMVKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKLPA-KSSAPKP 131
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D5AY99|A0A9D5AY99_PEA (H15 domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_032098 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.375e-50
Identity = 98/125 (78.40%), Postives = 108/125 (86.40%), Query Frame = 0 
Query:    1 MASEDPT-VAVEQPIAEEPAAVDTLPPVVNESDEPAAKPKKAPKEPKPRKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKL 124
            MASE+PT VAVEQPI EEP AVDTLPPVVNES+EP AKPKKAPK     K A   PRTHP YEEM+K+AI+ LKE+NGSSQYAIAKF+EEKHKQLPSNF+K+LLVQ KKLVASGKLVKVK S+KL
Sbjct:    1 MASEEPTTVAVEQPIVEEPEAVDTLPPVVNESEEPTAKPKKAPK-EPKAKKAPAKPRTHPTYEEMVKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 124
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6ML32|A0A2Z6ML32_TRISU (H15 domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_333780 PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 3.107e-50
Identity = 93/137 (67.88%), Postives = 102/137 (74.45%), Query Frame = 0 
Query:    1 MASEDPTVAVEQP-IAEEPAAVDTLPPVVNESDEPAAKPKKAPKEPKP-----------RKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLP 125
            MASEDPTV +E+    EE A VDTLPPVVNESDEPAA                      RKPAA+  RTHP YEEM+KDAI+TLKEK+GSSQYAIAKF+EEKH QLPSNF+KILLVQ KKLVAS KLVKVKGS+KLP
Sbjct:    1 MASEDPTVTIEETATVEETADVDTLPPVVNESDEPAADDTTTAAAAAAKPKKAAKEPKPRKPAAKNARTHPSYEEMVKDAIVTLKEKSGSSQYAIAKFIEEKHNQLPSNFKKILLVQIKKLVASDKLVKVKGSYKLP 137
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6NB86|A0A2Z6NB86_TRISU (H15 domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_333770 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.481e-50
Identity = 93/137 (67.88%), Postives = 102/137 (74.45%), Query Frame = 0 
Query:    1 MASEDPTVAVEQP-IAEEPAAVDTLPPVVNESDEPAAKPKKAPKEPKP-----------RKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKLP 125
            MASEDPTV +E+    EE A VDTLPPVVNESDEPAA                      RKPAA+  RTHP YEEM+KDAI+TLKEK+GSSQYAIAKF+EEKH QLPSNF+KILLVQ KKLVAS KLVKVKGS+KLP
Sbjct:    1 MASEDPTVTIEETATVEETADVDTLPPVVNESDEPAADDTTTAAAAAAKPKKAAKEPKPRKPAAKNARTHPSYEEMVKDAIVTLKEKSGSSQYAIAKFIEEKHNQLPSNFKKILLVQIKKLVASDKLVKVKGSYKLP 137
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D5AW65|A0A9D5AW65_PEA (H15 domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_032098 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.013e-49
Identity = 98/125 (78.40%), Postives = 108/125 (86.40%), Query Frame = 0 
Query:    1 MASEDPT-VAVEQPIAEEPAAVDTLPPVVNESDEPAAKPKKAPKEPKPRKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKL 124
            MASE+PT VAVEQPI EEP AVDTLPPVVNES+EP AKPKKAPK     K A   PRTHP YEEM+K+AI+ LKE+NGSSQYAIAKF+EEKHKQLPSNF+K+LLVQ KKLVASGKLVKVK S+KL
Sbjct:    1 MASEEPTTVAVEQPIVEEPEAVDTLPPVVNESEEPTAKPKKAPK-EPKAKKAPAKPRTHPTYEEMVKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 124
[Close]
BLAST of evm.Ca_v2.0_07497 vs. ExPASy TrEMBL (2024)
Match: tr|Q9SXQ8|Q9SXQ8_PEA (Ribosome-sedimenting protein OS=Pisum sativum OX=3888 GN=RSP PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.969e-49
Identity = 96/125 (76.80%), Postives = 107/125 (85.60%), Query Frame = 0 
Query:    1 MASEDPT-VAVEQPIAEEPAAVDTLPPVVNESDEPAAKPKKAPKEPKPRKPAARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRKILLVQSKKLVASGKLVKVKGSFKL 124
            MASE+PT VAVEQPI EEP AVDT PPVVNES+EP AKPKKAPK     K A   PRTHP YEEM+K+AI+ LKE+NGSSQYAIAKF+EEKHKQLPSNF+K+LLVQ +KLVASGKLVKVK S+KL
Sbjct:    1 MASEEPTTVAVEQPIVEEPEAVDTFPPVVNESEEPTAKPKKAPK-EPKAKKAPAKPRTHPTYEEMVKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIRKLVASGKLVKVKASYKL 124
The following BLAST results are available for this feature:
BLAST of evm.Ca_v2.0_07497 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|9.066e-3750.80Symbols: H1.2, HON2 | Histone 1.2 | chr2:13045360-... [more]
|4.260e-3660.31Symbols: H1.2, HON2 | Histone 1.2 | chr2:13045360-... [more]
|1.094e-2360.92Symbols: HON3, HIS1-3 | histone H1-3 | chr2:784609... [more]
|3.784e-1764.52Symbols: HON3, HIS1-3 | histone H1-3 | chr2:784625... [more]
|1.605e-944.32Symbols: H1.1, HON1 | Histone 1.1 | chr1:2076687-2... [more]
|1.274e-833.82Symbols: HMGA | high mobility group A | chr1:51386... [more]
|4.253e-843.28Symbols: HON4 | | chr3:6170309-6171558 REVERSE LE... [more]
|5.059e-843.28Symbols: HON4 | | chr3:6169384-6171558 REVERSE LE... [more]
|2.102e-736.71Symbols: no symbol available | no full name availa... [more]
|5.755e-740.63Symbols: HON5 | high mobility group A5 | chr1:1797... [more]
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BLAST of evm.Ca_v2.0_07497 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot )
Total hits: 10
Match NameE-valueIdentityDescription
sp|P26569|H12_ARATH8.756e-3650.80Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At... [more]
sp|P08283|H1_PEA3.098e-3058.14Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1[more]
sp|P37218|H1_SOLLC4.682e-2658.78Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV... [more]
sp|P27806|H1_WHEAT1.363e-2462.96Histone H1 OS=Triticum aestivum OX=4565 PE=2 SV=2[more]
sp|P40267|H1_SOLPN1.833e-2456.98Histone H1 OS=Solanum pennellii OX=28526 PE=2 SV=1[more]
sp|Q9M5W4|H1_EUPES3.384e-2469.74Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1[more]
sp|Q08864|H11_VOLCA2.322e-1855.79Histone H1-I OS=Volvox carteri OX=3067 GN=H1-I PE=... [more]
sp|Q08865|H12_VOLCA1.040e-1247.31Histone H1-II OS=Volvox carteri OX=3067 GN=H1-II P... [more]
sp|P54671|H1_DICDI3.284e-1141.38Histone H1 OS=Dictyostelium discoideum OX=44689 GN... [more]
sp|P26568|H11_ARATH1.577e-844.32Histone H1.1 OS=Arabidopsis thaliana OX=3702 GN=At... [more]
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BLAST of evm.Ca_v2.0_07497 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2XS87|A0A1S2XS87_CICAR0.000e+0100.00Histone H1-like OS=Cicer arietinum OX=3827 GN=LOC1... [more]
tr|Q9AT24|Q9AT24_PEA3.204e-5779.67Histone H1 (Fragment) OS=Pisum sativum OX=3888 GN=... [more]
tr|A0A2K3NZ46|A0A2K3NZ46_TRIPR2.189e-5570.59Histone H1-like protein OS=Trifolium pratense OX=5... [more]
tr|A0A1B0YTF1|A0A1B0YTF1_TRIRP2.010e-5375.56Histone H1 (Fragment) OS=Trifolium repens OX=3899 ... [more]
tr|Q84NF8|Q84NF8_9FABA1.503e-5078.20Histone H1 (Fragment) OS=Lens nigricans OX=41258 G... [more]
tr|A0A9D5AY99|A0A9D5AY99_PEA2.375e-5078.40H15 domain-containing protein OS=Pisum sativum OX=... [more]
tr|A0A2Z6ML32|A0A2Z6ML32_TRISU3.107e-5067.88H15 domain-containing protein OS=Trifolium subterr... [more]
tr|A0A2Z6NB86|A0A2Z6NB86_TRISU3.481e-5067.88H15 domain-containing protein OS=Trifolium subterr... [more]
tr|A0A9D5AW65|A0A9D5AW65_PEA1.013e-4978.40H15 domain-containing protein OS=Pisum sativum OX=... [more]
tr|Q9SXQ8|Q9SXQ8_PEA7.969e-4976.80Ribosome-sedimenting protein OS=Pisum sativum OX=3... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005819Linker histone H1/H5PRINTSPR00624HISTONEH5coord: 71..88
score: 33.33
coord: 113..137
score: 27.56
coord: 209..228
score: 44.44
coord: 187..204
score: 20.37
coord: 44..65
score: 36.36
coord: 148..162
score: 40.0
NoneNo IPR availableFUNFAMG3DSA:1.10.10.10:FF:000521coord: 52..137
e-value: 7.4E-43
score: 146.3
NoneNo IPR availablePANTHERPTHR11467HISTONE H1coord: 38..251
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 58..124
e-value: 4.2E-15
score: 67.0
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 57..126
score: 30.644554
IPR005818Linker histone H1/H5, domain H15CDDcd00073H15coord: 55..130
e-value: 1.02168E-24
score: 93.4547
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 53..136
e-value: 1.4E-20
score: 75.2
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 55..137

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCicArie.Frontier.2.0.Ca_v2.0_07497.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_07497.1; Name=evm.Ca_v2.0_07497; organism=Cicer arietinum; type=mRNA; length=936bp
ATGGCGTCTGAAGACCCCACCGTTGCCGTCGAGCAACCCATTGCGGAGGA
GCCGGCAGCCGTAGACACTCTACCTCCGGTGGTCAACGAATCGGACGAAC
CTGCAGCTAAACCCAAAAAGGCACCCAAGGAGCCCAAGCCCAGAAAGCCT
GCTGCCCGGACCCCTCGAACTCACCCTCCTTATGAAGAGATGATCAAGGA
CGCGATCCTTACGCTTAAGGAGAAGAATGGTTCAAGCCAGTACGCGATTG
CGAAGTTCCTTGAGGAGAAGCACAAGCAACTTCCATCGAACTTCAGGAAG
ATTCTGCTTGTTCAATCCAAGAAGCTTGTTGCTTCTGGAAAGCTCGTTAA
GGTCAAAGGATCTTTCAAGTTACCGTCGGTTAAGTCTTCTGCTCCAAAGC
CAGCGAAGAAGCCTGTTGCAGCTAAGCCCAAACCCAAAGCAAAGCCCgct
gctaaatctaagccagcagctgccaagtctaaagctgctcctgctaaagc
caaaccagcagcaacTAAGGCTAAGCCTGCTGCCAAGGCAAAGCCTGCAG
CTAAGCCCGCAGTAAAACCCAAGCCCGCTGCAAATGCCAGGCCGCCAGTT
GCCAAGGCTAGAGCTGCCCCTGTTGTTAAGGCTAAGCCTGCAGCAAAGGC
TAAGCCCGCAGCTAAGCCCAAGGCCAAGCCTGCTGCAAAGCCCAAGGCTG
CTGCCGCTGCTAAGGCGAAACCTGCAGCCAAGGCAAAGGCTGTGAAATCG
CCTGCTAAGTCTTCTAGAACCTCGACGAGAACGTCTCCTGGGAGGAGAGC
TGCTGCTCCGAAACCGGTGGCGGCGAAGAAGGCGACGACGCCGGTGAAGA
AAGCTCCGGCGAGAGCTGCAGCGAAGGGGAAGACTGCGAAATCTCCGGCG
AAGAAGACACCGGCGAAGAGGGGGGGAAGGAAATGA
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protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_07497.1

>drCicArie.Frontier.2.0.Ca_v2.0_07497.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_07497.1; Name=drCicArie.Frontier.2.0.Ca_v2.0_07497.1; organism=Cicer arietinum; type=polypeptide; length=311bp
MASEDPTVAVEQPIAEEPAAVDTLPPVVNESDEPAAKPKKAPKEPKPRKP
AARTPRTHPPYEEMIKDAILTLKEKNGSSQYAIAKFLEEKHKQLPSNFRK
ILLVQSKKLVASGKLVKVKGSFKLPSVKSSAPKPAKKPVAAKPKPKAKPA
AKSKPAAAKSKAAPAKAKPAATKAKPAAKAKPAAKPAVKPKPAANARPPV
AKARAAPVVKAKPAAKAKPAAKPKAKPAAKPKAAAAAKAKPAAKAKAVKS
PAKSSRTSTRTSPGRRAAAPKPVAAKKATTPVKKAPARAAAKGKTAKSPA
KKTPAKRGGRK
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mRNA from alignment at Ca3_v2.0:68979697..68980729+

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCicArie.Frontier.2.0.Ca_v2.0_07497.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_07497.1; Name=evm.Ca_v2.0_07497; organism=Cicer arietinum; type=mRNA; length=1033bp; location=Sequence derived from: Ca3_v2.0:68979697..68980729+ (Cicer arietinum
ATGGCGTCTGAAGACCCCACCGTTGCCGTCGAGCAACCCATTGCGGAGGA
GCCGGCAGCCGTAGACACTCTACCTCCGGTGGTCAACGAATCGGACGAAC
CTGCAGCTAAACCCAAAAAGGCACCCAAGGAGCCCAAGCCCAGAAAGCCT
GCTGCCCGGACCCCTCGAACTCACCCTCCTTATGAAGAGGTACTTAATTG
TTCCCCAAATTTAACTTAACCAATTTTCACAATCTTGATTCTGATCGAGT
TCTAATTTGAATTTGAATTTCATTTGAATTTTGTAGATGATCAAGGACGC
GATCCTTACGCTTAAGGAGAAGAATGGTTCAAGCCAGTACGCGATTGCGA
AGTTCCTTGAGGAGAAGCACAAGCAACTTCCATCGAACTTCAGGAAGATT
CTGCTTGTTCAATCCAAGAAGCTTGTTGCTTCTGGAAAGCTCGTTAAGGT
CAAAGGATCTTTCAAGTTACCGTCGGTTAAGTCTTCTGCTCCAAAGCCAG
CGAAGAAGCCTGTTGCAGCTAAGCCCAAACCCAAAGCAAAGCCCgctgct
aaatctaagccagcagctgccaagtctaaagctgctcctgctaaagccaa
accagcagcaacTAAGGCTAAGCCTGCTGCCAAGGCAAAGCCTGCAGCTA
AGCCCGCAGTAAAACCCAAGCCCGCTGCAAATGCCAGGCCGCCAGTTGCC
AAGGCTAGAGCTGCCCCTGTTGTTAAGGCTAAGCCTGCAGCAAAGGCTAA
GCCCGCAGCTAAGCCCAAGGCCAAGCCTGCTGCAAAGCCCAAGGCTGCTG
CCGCTGCTAAGGCGAAACCTGCAGCCAAGGCAAAGGCTGTGAAATCGCCT
GCTAAGTCTTCTAGAACCTCGACGAGAACGTCTCCTGGGAGGAGAGCTGC
TGCTCCGAAACCGGTGGCGGCGAAGAAGGCGACGACGCCGGTGAAGAAAG
CTCCGGCGAGAGCTGCAGCGAAGGGGAAGACTGCGAAATCTCCGGCGAAG
AAGACACCGGCGAAGAGGGGGGGAAGGAAATGA
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Coding sequence (CDS) from alignment at Ca3_v2.0:68979697..68980729+

>drCicArie.Frontier.2.0.Ca_v2.0_07497.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_07497.1; Name=evm.Ca_v2.0_07497; organism=Cicer arietinum; type=CDS; length=936bp; location=Sequence derived from: Ca3_v2.0:68979697..68980729+ (Cicer arietinum
ATGGCGTCTGAAGACCCCACCGTTGCCGTCGAGCAACCCATTGCGGAGGA
GCCGGCAGCCGTAGACACTCTACCTCCGGTGGTCAACGAATCGGACGAAC
CTGCAGCTAAACCCAAAAAGGCACCCAAGGAGCCCAAGCCCAGAAAGCCT
GCTGCCCGGACCCCTCGAACTCACCCTCCTTATGAAGAGATGATCAAGGA
CGCGATCCTTACGCTTAAGGAGAAGAATGGTTCAAGCCAGTACGCGATTG
CGAAGTTCCTTGAGGAGAAGCACAAGCAACTTCCATCGAACTTCAGGAAG
ATTCTGCTTGTTCAATCCAAGAAGCTTGTTGCTTCTGGAAAGCTCGTTAA
GGTCAAAGGATCTTTCAAGTTACCGTCGGTTAAGTCTTCTGCTCCAAAGC
CAGCGAAGAAGCCTGTTGCAGCTAAGCCCAAACCCAAAGCAAAGCCCgct
gctaaatctaagccagcagctgccaagtctaaagctgctcctgctaaagc
caaaccagcagcaacTAAGGCTAAGCCTGCTGCCAAGGCAAAGCCTGCAG
CTAAGCCCGCAGTAAAACCCAAGCCCGCTGCAAATGCCAGGCCGCCAGTT
GCCAAGGCTAGAGCTGCCCCTGTTGTTAAGGCTAAGCCTGCAGCAAAGGC
TAAGCCCGCAGCTAAGCCCAAGGCCAAGCCTGCTGCAAAGCCCAAGGCTG
CTGCCGCTGCTAAGGCGAAACCTGCAGCCAAGGCAAAGGCTGTGAAATCG
CCTGCTAAGTCTTCTAGAACCTCGACGAGAACGTCTCCTGGGAGGAGAGC
TGCTGCTCCGAAACCGGTGGCGGCGAAGAAGGCGACGACGCCGGTGAAGA
AAGCTCCGGCGAGAGCTGCAGCGAAGGGGAAGACTGCGAAATCTCCGGCG
AAGAAGACACCGGCGAAGAGGGGGGGAAGGAAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR005819H1/H5
IPR005818Histone_H1/H5_H15
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: Molecular Function
TermDefinition
GO:0030527structural constituent of chromatin
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly