evm.Ca_v2.0_07772

Transcript Overview
Nameevm.Ca_v2.0_07772
Unique NamedrCicArie.Frontier.2.0.Ca_v2.0_07772.1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length966
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca3_v2.0chromosomeCa3_v2.0:71581141..71583942 +Cicer arietinum cv. CDC Frontier genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
carccaR157Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carccaR166Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carccaR177Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carvumR200Vigna umbellata FF25 genome v1.0Vigna umbellata
carvumR202Vigna umbellata FF25 genome v1.0Vigna umbellata
carvumR231Vigna umbellata FF25 genome v1.0Vigna umbellata
carvumR261Vigna umbellata FF25 genome v1.0Vigna umbellata
carvumR263Vigna umbellata FF25 genome v1.0Vigna umbellata
carvvaR147Vicia villosa cv. AU Merit genome v1.0Vicia villosa
carvvaR197Vicia villosa cv. AU Merit genome v1.0Vicia villosa
carvasR203Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvstR214Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvasR234Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvasR237Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvasR258Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvasR260Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvstR243Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvstR246Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvstR270Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvstR273Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvunR144Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
carpvfR193Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
carvunR181Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
carpvfR221Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
carvunR191Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
carpvfR241Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
carvunR197Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
carpvfR256Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
carpvfR263Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vigst.07G052700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
XM_058883117.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigst.04G219900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigan.04G340100.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
PvulFLAVERTChr05.1000935Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vum_04G02470.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun01g169100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Cc_v2.0_23720.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigan.07G069700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun05g240600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Cc_v2.0_07861.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
PvulFLAVERTChr01.1200Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
evm.Ca_v2.0_07772drCicArie.Frontier.2.0.Ca_v2.0_07772Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_07772.1.exon1drCicArie.Frontier.2.0.Ca_v2.0_07772.1.exon1Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_07772.1.exon2drCicArie.Frontier.2.0.Ca_v2.0_07772.1.exon2Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_07772.1.exon3drCicArie.Frontier.2.0.Ca_v2.0_07772.1.exon3Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_07772.1.exon4drCicArie.Frontier.2.0.Ca_v2.0_07772.1.exon4Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_07772.1.exon5drCicArie.Frontier.2.0.Ca_v2.0_07772.1.exon5Cicer arietinumexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_07772.1.utr5p1drCicArie.Frontier.2.0.Ca_v2.0_07772.1.utr5p1Cicer arietinumfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.cds.Ca_v2.0_07772.1drCicArie.Frontier.2.0.cds.Ca_v2.0_07772.1Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_07772.1drCicArie.Frontier.2.0.cds.Ca_v2.0_07772.1_2Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_07772.1drCicArie.Frontier.2.0.cds.Ca_v2.0_07772.1_3Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_07772.1drCicArie.Frontier.2.0.cds.Ca_v2.0_07772.1_4Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_07772.1drCicArie.Frontier.2.0.cds.Ca_v2.0_07772.1_5Cicer arietinumCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_07772.1.utr3p1drCicArie.Frontier.2.0.Ca_v2.0_07772.1.utr3p1Cicer arietinumthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_07772.1drCicArie.Frontier.2.0.Ca_v2.0_07772.1Cicer arietinumpolypeptide
drCicArie.Frontier.2.0.Ca_v2.0_07772.1drCicArie.Frontier.2.0.Ca_v2.0_07772.1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of evm.Ca_v2.0_07772 vs. Araport11
Match: | (Symbols: ATU2AF35B, U2AF35B | | chr5:17170445-17171296 REVERSE LENGTH=283)

HSP 1 Score: 333.183 bits (853), Expect = 1.725e-114
Identity = 190/301 (63.12%), Postives = 213/301 (70.76%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRWNDRSGSRSRSPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRG-----------KRSRSPGGRDRSPPIRDRESSVERRARIEQWNREKE 290
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PTISPTL+LSNMYQRPDM             P   PQ + LDP K+Q+HF+DFYED+FEEL+K+G+++SLN+CDNLADHM+GNVYV +KEEDHAA AL  L GRFYSGRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+ISR+LR++LFGR RR   R           R     S        RD DR HGN G+R   RS RH             KRSRSP           RE S ERRARIEQWNRE++
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM-----------ITPGVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEEDHAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISRELRRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDR-HGN-GKRSSDRSERHDRDGGGRRRHGSPKRSRSPRNV--------REGSEERRARIEQWNRERD 280
[Close]
BLAST of evm.Ca_v2.0_07772 vs. Araport11
Match: | (Symbols: ATU2AF35B, U2AF35B | | chr5:17170445-17171296 REVERSE LENGTH=283)

HSP 1 Score: 333.183 bits (853), Expect = 1.725e-114
Identity = 190/301 (63.12%), Postives = 213/301 (70.76%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRWNDRSGSRSRSPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRG-----------KRSRSPGGRDRSPPIRDRESSVERRARIEQWNREKE 290
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PTISPTL+LSNMYQRPDM             P   PQ + LDP K+Q+HF+DFYED+FEEL+K+G+++SLN+CDNLADHM+GNVYV +KEEDHAA AL  L GRFYSGRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+ISR+LR++LFGR RR   R           R     S        RD DR HGN G+R   RS RH             KRSRSP           RE S ERRARIEQWNRE++
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM-----------ITPGVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEEDHAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISRELRRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDR-HGN-GKRSSDRSERHDRDGGGRRRHGSPKRSRSPRNV--------REGSEERRARIEQWNRERD 280
[Close]
BLAST of evm.Ca_v2.0_07772 vs. Araport11
Match: | (Symbols: ATU2AF35A | | chr1:9615152-9616042 FORWARD LENGTH=296)

HSP 1 Score: 329.331 bits (843), Expect = 7.750e-113
Identity = 188/296 (63.51%), Postives = 207/296 (69.93%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRWNDRSGSRSR-----SPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRGKRSRSPGGRDRSPPIRDRESSV-----ERRARIEQWN 286
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PTISPTL+LSNMYQRPDM       TP      QP     LDP K+QEHF+DF+EDLFEEL K+G+I+SLNICDNLADHM+GNVYVQ+KEED AA AL  L GRFYSGRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K +SR+LR++LFGR RR   R           SP   R+ + R  S R    RD DR    HG  +RS     R +R  S G R  SP              ERRARIEQWN
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM------ITPGVDAQGQP-----LDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDREFYRHGSGKRSSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWN 285
[Close]
BLAST of evm.Ca_v2.0_07772 vs. Araport11
Match: | (Symbols: ATU2AF35A | | chr1:9615302-9616042 FORWARD LENGTH=246)

HSP 1 Score: 227.254 bits (578), Expect = 2.193e-73
Identity = 141/246 (57.32%), Postives = 158/246 (64.23%), Query Frame = 0 
Query:   51 MYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRWNDRSGSRSR-----SPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRGKRSRSPGGRDRSPPIRDRESSV-----ERRARIEQWN 286
            MYQRPDM       TP      QP     LDP K+QEHF+DF+EDLFEEL K+G+I+SLNICDNLADHM+GNVYVQ+KEED AA AL  L GRFYSGRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K +SR+LR++LFGR RR   R           SP   R+ + R  S R    RD DR    HG  +RS     R +R  S G R  SP              ERRARIEQWN
Sbjct:    1 MYQRPDM------ITPGVDAQGQP-----LDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDREFYRHGSGKRSSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWN 235
[Close]
BLAST of evm.Ca_v2.0_07772 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:3384164-3388373 REVERSE LENGTH=757)

HSP 1 Score: 134.806 bits (338), Expect = 6.636e-35
Identity = 63/180 (35.00%), Postives = 104/180 (57.78%), Query Frame = 0 
Query:    9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLD--PDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 183
            FGTE+D+ +CPF+ K GACR G RCSR+H  P  S TL++ NMY  P +                  Q E L+   ++ +  +++FYED+  E  KYG++ +  +C N + H+ GNVYV Y+  + A  A  ++ GR+++G+ +  +F  ++ ++ A C +Y ++    C+RG  CNF+H
Sbjct:  237 FGTEQDKAHCPFHLKTGACRFGQRCSRVHFYPNKSCTLLMKNMYNGPGITWE---------------QDEGLEYTDEEAELCYEEFYEDVHTEFLKYGELVNFKVCRNGSFHLKGNVYVHYRSLESAILAYQSINGRYFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGSACNFIH 401
[Close]
BLAST of evm.Ca_v2.0_07772 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:3384164-3388373 REVERSE LENGTH=748)

HSP 1 Score: 134.806 bits (338), Expect = 6.715e-35
Identity = 63/180 (35.00%), Postives = 104/180 (57.78%), Query Frame = 0 
Query:    9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLD--PDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 183
            FGTE+D+ +CPF+ K GACR G RCSR+H  P  S TL++ NMY  P +                  Q E L+   ++ +  +++FYED+  E  KYG++ +  +C N + H+ GNVYV Y+  + A  A  ++ GR+++G+ +  +F  ++ ++ A C +Y ++    C+RG  CNF+H
Sbjct:  228 FGTEQDKAHCPFHLKTGACRFGQRCSRVHFYPNKSCTLLMKNMYNGPGITWE---------------QDEGLEYTDEEAELCYEEFYEDVHTEFLKYGELVNFKVCRNGSFHLKGNVYVHYRSLESAILAYQSINGRYFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGSACNFIH 392
[Close]
BLAST of evm.Ca_v2.0_07772 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:16328221-16328448 REVERSE LENGTH=75)

HSP 1 Score: 106.686 bits (265), Expect = 6.686e-29
Identity = 48/73 (65.75%), Postives = 61/73 (83.56%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQ 73
            M EHLASI+GTEKDRVNCPFYFKIG CR+GDRCSRL+TKP+ISPTL+LSN YQ+  +   F++P  ++ + P+
Sbjct:    1 MVEHLASIYGTEKDRVNCPFYFKIGVCRNGDRCSRLYTKPSISPTLLLSNTYQQGRLK-QFLDPVQSREKDPK 72
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FMY5|U2AFB_ARATH (Splicing factor U2af small subunit B OS=Arabidopsis thaliana OX=3702 GN=U2AF35B PE=1 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.650e-113
Identity = 190/301 (63.12%), Postives = 213/301 (70.76%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRWNDRSGSRSRSPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRG-----------KRSRSPGGRDRSPPIRDRESSVERRARIEQWNREKE 290
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PTISPTL+LSNMYQRPDM             P   PQ + LDP K+Q+HF+DFYED+FEEL+K+G+++SLN+CDNLADHM+GNVYV +KEEDHAA AL  L GRFYSGRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+ISR+LR++LFGR RR   R           R     S        RD DR HGN G+R   RS RH             KRSRSP           RE S ERRARIEQWNRE++
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM-----------ITPGVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEEDHAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISRELRRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDR-HGN-GKRSSDRSERHDRDGGGRRRHGSPKRSRSPRNV--------REGSEERRARIEQWNRERD 280
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9ZQW8|U2AFA_ORYSJ (Splicing factor U2af small subunit A OS=Oryza sativa subsp. japonica OX=39947 GN=U2AF35A PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 4.310e-112
Identity = 183/302 (60.60%), Postives = 210/302 (69.54%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFG---RSRRWNDRSGSRSRSPPRSRNYEGRSYSGRG--------SGRRDFDRPHGNHGRRQRSRSPRHRGKRSRSPGGRDRSPPIRDRESSVERRARIEQWNREKEV 291
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KP++SPTL+LSNMY RPDM    I P  +    P       +DP+K+Q  F+DFYED+FEELSKYG+I+SL++CDN ADHM+GNVYVQ++EED AA AL  LTGR+YSGRPIIV+FSPV+DFREATCRQYEEN CNRGGYCNFMH+K+I RDLRKRLFG   RSRR +    SRS SP   R    R  S R          G  D+ R  G   R        +    SR         P+RD   S ERRA+IEQWNRE+E 
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDM----ITPGIDAQGNP-------IDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIGNVYVQFREEDQAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDLRKRLFGHLHRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGGSHDYYR--GGSRRSSERHRSSYDSDGSRRRHRSRTRSPVRD--GSEERRAQIEQWNREREA 287
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9S709|U2AFA_ARATH (Splicing factor U2af small subunit A OS=Arabidopsis thaliana OX=3702 GN=U2AF35A PE=1 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 7.412e-112
Identity = 188/296 (63.51%), Postives = 207/296 (69.93%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRWNDRSGSRSR-----SPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRGKRSRSPGGRDRSPPIRDRESSV-----ERRARIEQWN 286
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PTISPTL+LSNMYQRPDM       TP      QP     LDP K+QEHF+DF+EDLFEEL K+G+I+SLNICDNLADHM+GNVYVQ+KEED AA AL  L GRFYSGRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K +SR+LR++LFGR RR   R           SP   R+ + R  S R    RD DR    HG  +RS     R +R  S G R  SP              ERRARIEQWN
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM------ITPGVDAQGQP-----LDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDREFYRHGSGKRSSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWN 285
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6AUG0|U2AFB_ORYSJ (Splicing factor U2af small subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=U2AF35B PE=2 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 1.910e-103
Identity = 139/196 (70.92%), Postives = 168/196 (85.71%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLF 196
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PT+SPT+VL+NMYQRPDM       TP      QP     +DP+K+QEHF+DFYED++EELSK+G++++LN+CDNLADHM+GNVYVQ++EE+ A  A   L GRFYSGRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I R+LR++L+
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDM------ITPGVDAQGQP-----IDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRELRRKLY 185
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q7TP17|U2AF4_RAT (Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus OX=10116 GN=U2af1l4 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 6.275e-79
Identity = 118/217 (54.38%), Postives = 153/217 (70.51%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELS-KYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRWNDRSGSRSRSPPRS 216
            MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KPT S T+VL N+Y+ P           N  Q          D + +QEH+D+F+E++F EL  KYG+I+ +N+CDNL DH+VGNVYV+++ E+ A  A+  L  R+++G+ +  + SPVTDFRE+ CRQYE   C RGG+CNFMHL+ ISR+LR++L+GR        G R RSPPRS
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQ----------NTAQTADGSHCHVSDVE-VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYGR--------GPRHRSPPRS 198
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8BGJ9|U2AF4_MOUSE (Splicing factor U2AF 26 kDa subunit OS=Mus musculus OX=10090 GN=U2af1l4 PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 6.275e-79
Identity = 118/217 (54.38%), Postives = 153/217 (70.51%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELS-KYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRWNDRSGSRSRSPPRS 216
            MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KPT S T+VL N+Y+ P           N  Q          D + +QEH+D+F+E++F EL  KYG+I+ +N+CDNL DH+VGNVYV+++ E+ A  A+  L  R+++G+ +  + SPVTDFRE+ CRQYE   C RGG+CNFMHL+ ISR+LR++L+GR        G R RSPPRS
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQ----------NTAQTADGSHCHVSDVE-VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYGR--------GPRHRSPPRS 198
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy Swiss-Prot (2024)
Match: sp|A1A4K8|U2AF1_BOVIN (Splicing factor U2AF 35 kDa subunit OS=Bos taurus OX=9913 GN=U2AF1 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 6.541e-76
Identity = 109/197 (55.33%), Postives = 145/197 (73.60%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELS-KYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLF 196
            MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KPT S T+ L N+Y+ P           N  Q     +    D + +QEH+D+F+E++F E+  KYG+++ +N+CDNL DH+VGNVYV+++ E+ A  A+++L  R+++G+PI  + SPVTDFREA CRQYE   C RGG+CNFMHLK ISR+LR+ L+
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQ----------NSSQSADGLRCAVSDVE-MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9D883|U2AF1_MOUSE (Splicing factor U2AF 35 kDa subunit OS=Mus musculus OX=10090 GN=U2af1 PE=1 SV=4)

HSP 1 Score: 235.728 bits (600), Expect = 6.979e-76
Identity = 109/197 (55.33%), Postives = 145/197 (73.60%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELS-KYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLF 196
            MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KPT S T+ L N+Y+ P           N  Q     +    D + +QEH+D+F+E++F E+  KYG+++ +N+CDNL DH+VGNVYV+++ E+ A  A+++L  R+++G+PI  + SPVTDFREA CRQYE   C RGG+CNFMHLK ISR+LR+ L+
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQ----------NSSQSADGLRCAVSDVE-MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q01081|U2AF1_HUMAN (Splicing factor U2AF 35 kDa subunit OS=Homo sapiens OX=9606 GN=U2AF1 PE=1 SV=3)

HSP 1 Score: 235.728 bits (600), Expect = 7.208e-76
Identity = 109/197 (55.33%), Postives = 145/197 (73.60%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELS-KYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLF 196
            MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KPT S T+ L N+Y+ P           N  Q     +    D + +QEH+D+F+E++F E+  KYG+++ +N+CDNL DH+VGNVYV+++ E+ A  A+++L  R+++G+PI  + SPVTDFREA CRQYE   C RGG+CNFMHLK ISR+LR+ L+
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQ----------NSSQSADGLRCAVSDVE-MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q3T127|U2AF4_BOVIN (Splicing factor U2AF 26 kDa subunit OS=Bos taurus OX=9913 GN=U2AF1L4 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 1.090e-75
Identity = 109/197 (55.33%), Postives = 144/197 (73.10%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELS-KYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLF 196
            MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KPT S T+VL N+Y+ P           N  Q          D + +QEH+D+F+E++F EL  KYG+I+ +N+CDNL DH+VGNVYV+++ E+ A  A++ L  R+++G+ +  + SPVTDFRE+ CRQYE   C RGG+CNFMHL+ ISRDLR++L+
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQ----------NTAQTADGSHCHVSDVE-VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVVELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRDLRRQLY 186
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XUE8|A0A1S2XUE8_CICAR (Splicing factor U2af small subunit B-like OS=Cicer arietinum OX=3827 GN=LOC101497382 PE=4 SV=1)

HSP 1 Score: 662.914 bits (1709), Expect = 0.000e+0
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRWNDRSGSRSRSPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRGKRSRSPGGRDRSPPIRDRESSVERRARIEQWNREKEVEDSGNRDNKNNNDYEEPSLKNGSESGNHQI 321
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRWNDRSGSRSRSPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRGKRSRSPGGRDRSPPIRDRESSVERRARIEQWNREKEVEDSGNRDNKNNNDYEEPSLKNGSESGNHQI
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRWNDRSGSRSRSPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRGKRSRSPGGRDRSPPIRDRESSVERRARIEQWNREKEVEDSGNRDNKNNNDYEEPSLKNGSESGNHQI 321
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4XRU0|A0A9D4XRU0_PEA (Uncharacterized protein OS=Pisum sativum OX=3888 GN=KIW84_031432 PE=4 SV=1)

HSP 1 Score: 628.632 bits (1620), Expect = 0.000e+0
Identity = 310/326 (95.09%), Postives = 317/326 (97.24%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQ---PESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRR-WNDRSGSRSRSPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRGKRSRSPGGRDRSP-PIRDRESSVERRARIEQWNREKEVEDSGNRDNKNNNDYEEPSLKNGSESGNHQI 321
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQ PQPPQ   PESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRR WNDRSGSRSRSPPR+RNYEGRSYSGRGSGRRD DRPHG+HGRR RSRSPRHRGKRSRSP GRDRSP PIR+RESSVERRARIEQWNREKEVEDSGN+DNK++NDYEEPSL+NGSESGNHQI
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQQPQPPQQPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRSWNDRSGSRSRSPPRNRNYEGRSYSGRGSGRRDLDRPHGHHGRRPRSRSPRHRGKRSRSPAGRDRSPNPIRERESSVERRARIEQWNREKEVEDSGNKDNKSSNDYEEPSLRNGSESGNHQI 326
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3NJ59|A0A2K3NJ59_TRIPR (Splicing factor U2af small subunit A-like protein OS=Trifolium pratense OX=57577 GN=L195_g026387 PE=4 SV=1)

HSP 1 Score: 575.474 bits (1482), Expect = 0.000e+0
Identity = 306/326 (93.87%), Postives = 313/326 (96.01%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQP---ESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGR-SRRWNDRSGSRSRSPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRGKRSRSPGGRDRSP-PIRDRESSVERRARIEQWNREKEVEDSGNRDNKNNNDYEEPSLKNGSESGNHQI 321
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQ PQPPQ    ESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGR SRRWNDRSGSRSRSPPR+RNYEGRSYSGRGSGRRD DR H +HGRR RSRSPRHRGKRSRSP GRDRSP PIR+RE+SVERRARIEQWNREKEV+DSGNRD K+NNDYEEPSLKNG+ESGNHQI
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQQPQPPQQPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSSRRWNDRSGSRSRSPPRNRNYEGRSYSGRGSGRRDLDRSHAHHGRRPRSRSPRHRGKRSRSPAGRDRSPNPIRERETSVERRARIEQWNREKEVDDSGNRDTKSNNDYEEPSLKNGNESGNHQI 326
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy TrEMBL (2024)
Match: tr|A0A072U424|A0A072U424_MEDTR (Putative transcription factor C3H family OS=Medicago truncatula OX=3880 GN=25499390 PE=4 SV=1)

HSP 1 Score: 558.91 bits (1439), Expect = 0.000e+0
Identity = 305/327 (93.27%), Postives = 313/327 (95.72%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQP---ESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGR-SRRWNDRSGSRSRSPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRGKRSRSPGGRDRSP-PIR-DRESSVERRARIEQWNREKEVEDSGNRDNKNNNDYEEPSLKNGSESGNHQI 321
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQ PQPPQP   ESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGR SRRWNDRSGSRSRSPPR+RNYEGRSYSGRGSGRRD DR HG+HGRR RSRSPRHRG+RSRSP GRDRSP P+R +RESSVERRARIEQWNREKEV DSGN+DNK+NNDYEE  LKNGS+SGNHQI
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSSRRWNDRSGSRSRSPPRNRNYEGRSYSGRGSGRRDLDRSHGSHGRRPRSRSPRHRGRRSRSPVGRDRSPNPVRGERESSVERRARIEQWNREKEVGDSGNKDNKSNNDYEEAGLKNGSDSGNHQI 327
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy TrEMBL (2024)
Match: tr|I3T805|I3T805_MEDTR (Transcription factor C3H family OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 556.599 bits (1433), Expect = 0.000e+0
Identity = 304/327 (92.97%), Postives = 312/327 (95.41%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQP---ESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGR-SRRWNDRSGSRSRSPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRGKRSRSPGGRDRSP-PIR-DRESSVERRARIEQWNREKEVEDSGNRDNKNNNDYEEPSLKNGSESGNHQI 321
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQ PQPPQP   ESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIV FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGR SRRWNDRSGSRSRSPPR+RNYEGRSYSGRGSGRRD DR HG+HGRR RSRSPRHRG+RSRSP GRDRSP P+R +RESSVERRARIEQWNREKEV DSGN+DNK+NNDYEE  LKNGS+SGNHQI
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVGFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSSRRWNDRSGSRSRSPPRNRNYEGRSYSGRGSGRRDLDRSHGSHGRRPRSRSPRHRGRRSRSPVGRDRSPNPVRGERESSVERRARIEQWNREKEVGDSGNKDNKSNNDYEEAGLKNGSDSGNHQI 327
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TV36|A0A151TV36_CAJCA (Splicing factor U2af small subunit B OS=Cajanus cajan OX=3821 GN=KK1_010180 PE=4 SV=1)

HSP 1 Score: 526.554 bits (1355), Expect = 0.000e+0
Identity = 270/322 (83.85%), Postives = 291/322 (90.37%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRWNDRSGSRSRSPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRGKRSRSPGGRDRSPPIRDRESSVERRARIEQWNREKEVEDSGNRDNKNNNDYEEPSL-KNGSESGNHQI 321
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMN+N I   PNQPQP      +SLDPDK+Q+HFDDFYEDLFEELSKYG IQSLNICDNLADHMVGNVYVQ++EEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLR++LFGR+RRWN RSGSRSRSPPR+RN+   S++GR SGRRDFDRPH +HGRR RSRSPR+RGKRSRSP GRDRSP    RESS ERRA+IEQWNREKE EDSG + N  +NDY+E S+ +NGSESGNHQI
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMNIIT-NPNQPQP------QSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLADHMVGNVYVQFREEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRRKLFGRNRRWNGRSGSRSRSPPRNRNHGEHSHAGRSSGRRDFDRPHSHHGRRPRSRSPRYRGKRSRSPVGRDRSPV---RESSAERRAKIEQWNREKEQEDSGTKSNLKSNDYQEQSVAQNGSESGNHQI 312
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445LE31|A0A445LE31_GLYSO (Splicing factor U2af small subunit B OS=Glycine soja OX=3848 GN=D0Y65_007607 PE=4 SV=1)

HSP 1 Score: 525.013 bits (1351), Expect = 0.000e+0
Identity = 271/323 (83.90%), Postives = 293/323 (90.71%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRWNDRSGSRSRSPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRGKRSRSPGGRDRSPPIRDRESSVERRARIEQWNREKEVEDSGNRDN-KNNNDYEEPSL-KNGSESGNHQI 321
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMN+N I         P  PQP+SLDPDK+Q+HFDDFYEDLFEELSKYG IQSLNICDNLADHMVGNVYVQ++EEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLR++LFGR+RRWN RSGSRSRSPPR+RN+   S+SGRGSGRRDFDR HG HGRR RSRSPR+RGKRSRSP GRDRSPPI  RESS ERRA+IEQWNREKE  D+GN +N K+++DY+E S+ +NGSESGNHQI
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMNIITN-------PDQPQPQSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLADHMVGNVYVQFREEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRRKLFGRNRRWNGRSGSRSRSPPRNRNHGENSHSGRGSGRRDFDRSHGPHGRRPRSRSPRYRGKRSRSPVGRDRSPPI--RESSAERRAKIEQWNREKEQGDTGNMNNSKSSDDYQEQSVAQNGSESGNHQI 314
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy TrEMBL (2024)
Match: tr|I1JPW6|I1JPW6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100811622 PE=4 SV=1)

HSP 1 Score: 523.087 bits (1346), Expect = 0.000e+0
Identity = 270/323 (83.59%), Postives = 293/323 (90.71%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRWNDRSGSRSRSPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRGKRSRSPGGRDRSPPIRDRESSVERRARIEQWNREKEVEDSGNRDN-KNNNDYEEPSL-KNGSESGNHQI 321
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMN++ I         P  PQP+SLDPDK+Q+HFDDFYEDLFEELSKYG IQSLNICDNLADHMVGNVYVQ++EEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLR++LFGR+RRWN RSGSRSRSPPR+RN+   S+SGRGSGRRDFDR HG HGRR RSRSPR+RGKRSRSP GRDRSPPI  RESS ERRA+IEQWNREKE  D+GN +N K+++DY+E S+ +NGSESGNHQI
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMSIITN-------PDQPQPQSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLADHMVGNVYVQFREEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRRKLFGRNRRWNGRSGSRSRSPPRNRNHGENSHSGRGSGRRDFDRSHGPHGRRPRSRSPRYRGKRSRSPVGRDRSPPI--RESSAERRAKIEQWNREKEQGDTGNMNNSKSSDDYQEQSVAQNGSESGNHQI 314
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445FIL9|A0A445FIL9_GLYSO (Splicing factor U2af small subunit B OS=Glycine soja OX=3848 GN=D0Y65_051938 PE=4 SV=1)

HSP 1 Score: 521.931 bits (1343), Expect = 0.000e+0
Identity = 267/323 (82.66%), Postives = 293/323 (90.71%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRWNDRSGSRSRSPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRGKRSRSPGGRDRSPPIRDRESSVERRARIEQWNREKEVEDSGNRDN-KNNNDYEEPSL-KNGSESGNHQI 321
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMN+N I         P  PQP+SLDPDK+Q+HFDDFYEDLFEELSKYG IQSLNICDNLADHMVGNVYVQ++EEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLR++LFGR+RRWN RSGSRS+SPPR+RN+    +SGRGSGRRDFDR HG+HGRR RSRSPR+RGKRSRSP GRDRSPPI  RE+S ERRA+IEQWNREKE  ++ N++N K+N+DY+E S+ +NGSESGNHQI
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMNIITN-------PDQPQPQSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLADHMVGNVYVQFREEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRRKLFGRNRRWNGRSGSRSKSPPRNRNHGEHLHSGRGSGRRDFDRSHGHHGRRPRSRSPRYRGKRSRSPVGRDRSPPI--RENSAERRAKIEQWNREKEQGETSNKNNTKSNDDYQEQSVAQNGSESGNHQI 314
[Close]
BLAST of evm.Ca_v2.0_07772 vs. ExPASy TrEMBL (2024)
Match: tr|I1NAI8|I1NAI8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100783847 PE=4 SV=1)

HSP 1 Score: 521.931 bits (1343), Expect = 0.000e+0
Identity = 267/323 (82.66%), Postives = 293/323 (90.71%), Query Frame = 0 
Query:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRRWNDRSGSRSRSPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSPRHRGKRSRSPGGRDRSPPIRDRESSVERRARIEQWNREKEVEDSGNRDN-KNNNDYEEPSL-KNGSESGNHQI 321
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMN+N I         P  PQP+SLDPDK+Q+HFDDFYEDLFEELSKYG IQSLNICDNLADHMVGNVYVQ++EEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLR++LFGR+RRWN RSGSRS+SPPR+RN+    +SGRGSGRRDFDR HG+HGRR RSRSPR+RGKRSRSP GRDRSPPI  RE+S ERRA+IEQWNREKE  ++ N++N K+N+DY+E S+ +NGSESGNHQI
Sbjct:    1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMNIITN-------PDQPQPQSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLADHMVGNVYVQFREEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRRKLFGRNRRWNGRSGSRSKSPPRNRNHGEHLHSGRGSGRRDFDRSHGHHGRRPRSRSPRYRGKRSRSPVGRDRSPPI--RENSAERRAKIEQWNREKEQGETSNKNNTKSNDDYQEQSVAQNGSESGNHQI 314
The following BLAST results are available for this feature:
BLAST of evm.Ca_v2.0_07772 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11)
Total hits: 7
Match NameE-valueIdentityDescription
|1.725e-11463.12Symbols: ATU2AF35B, U2AF35B | | chr5:17170445-171... [more]
|1.725e-11463.12Symbols: ATU2AF35B, U2AF35B | | chr5:17170445-171... [more]
|7.750e-11363.51Symbols: ATU2AF35A | | chr1:9615152-9616042 FORWA... [more]
|2.193e-7357.32Symbols: ATU2AF35A | | chr1:9615302-9616042 FORWA... [more]
|6.636e-3535.00Symbols: no symbol available | no full name availa... [more]
|6.715e-3535.00Symbols: no symbol available | no full name availa... [more]
|6.686e-2965.75Symbols: no symbol available | no full name availa... [more]
back to top
BLAST of evm.Ca_v2.0_07772 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot )
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q9FMY5|U2AFB_ARATH1.650e-11363.12Splicing factor U2af small subunit B OS=Arabidopsi... [more]
sp|Q9ZQW8|U2AFA_ORYSJ4.310e-11260.60Splicing factor U2af small subunit A OS=Oryza sati... [more]
sp|Q9S709|U2AFA_ARATH7.412e-11263.51Splicing factor U2af small subunit A OS=Arabidopsi... [more]
sp|Q6AUG0|U2AFB_ORYSJ1.910e-10370.92Splicing factor U2af small subunit B OS=Oryza sati... [more]
sp|Q7TP17|U2AF4_RAT6.275e-7954.38Splicing factor U2AF 26 kDa subunit OS=Rattus norv... [more]
sp|Q8BGJ9|U2AF4_MOUSE6.275e-7954.38Splicing factor U2AF 26 kDa subunit OS=Mus musculu... [more]
sp|A1A4K8|U2AF1_BOVIN6.541e-7655.33Splicing factor U2AF 35 kDa subunit OS=Bos taurus ... [more]
sp|Q9D883|U2AF1_MOUSE6.979e-7655.33Splicing factor U2AF 35 kDa subunit OS=Mus musculu... [more]
sp|Q01081|U2AF1_HUMAN7.208e-7655.33Splicing factor U2AF 35 kDa subunit OS=Homo sapien... [more]
sp|Q3T127|U2AF4_BOVIN1.090e-7555.33Splicing factor U2AF 26 kDa subunit OS=Bos taurus ... [more]
back to top
BLAST of evm.Ca_v2.0_07772 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2XUE8|A0A1S2XUE8_CICAR0.000e+0100.00Splicing factor U2af small subunit B-like OS=Cicer... [more]
tr|A0A9D4XRU0|A0A9D4XRU0_PEA0.000e+095.09Uncharacterized protein OS=Pisum sativum OX=3888 G... [more]
tr|A0A2K3NJ59|A0A2K3NJ59_TRIPR0.000e+093.87Splicing factor U2af small subunit A-like protein ... [more]
tr|A0A072U424|A0A072U424_MEDTR0.000e+093.27Putative transcription factor C3H family OS=Medica... [more]
tr|I3T805|I3T805_MEDTR0.000e+092.97Transcription factor C3H family OS=Medicago trunca... [more]
tr|A0A151TV36|A0A151TV36_CAJCA0.000e+083.85Splicing factor U2af small subunit B OS=Cajanus ca... [more]
tr|A0A445LE31|A0A445LE31_GLYSO0.000e+083.90Splicing factor U2af small subunit B OS=Glycine so... [more]
tr|I1JPW6|I1JPW6_SOYBN0.000e+083.59Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445FIL9|A0A445FIL9_GLYSO0.000e+082.66Splicing factor U2af small subunit B OS=Glycine so... [more]
tr|I1NAI8|I1NAI8_SOYBN0.000e+082.66Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009145U2 auxiliary factor small subunitPRINTSPR01848U2AUXFACTORcoord: 18..37
score: 85.68
coord: 141..165
score: 62.18
coord: 37..57
score: 56.71
coord: 114..136
score: 60.67
coord: 86..101
score: 57.1
coord: 176..188
score: 65.73
IPR009145U2 auxiliary factor small subunitPANTHERPTHR12620U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNITcoord: 1..303
NoneNo IPR availableFUNFAMG3DSA:3.30.70.330:FF:000122coord: 45..156
e-value: 3.8E-45
score: 154.0
NoneNo IPR availableCDDcd12539RRM_U2AF35Bcoord: 44..156
e-value: 4.44927E-59
score: 183.369
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 94..150
e-value: 0.033
score: 25.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 58..157
score: 10.991239
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 37..174
e-value: 2.4E-27
score: 97.1
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 14..37
e-value: 5.8E-4
score: 31.0
coord: 161..184
e-value: 0.6
score: 21.4
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 12..40
score: 13.112443
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 159..186
score: 10.464717
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 88..160

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCicArie.Frontier.2.0.Ca_v2.0_07772.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_07772.1; Name=evm.Ca_v2.0_07772; organism=Cicer arietinum; type=mRNA; length=966bp
ATGGCGGAGCATTTGGCATCGATATTCGGAACAGAGAAAGACAGAGTTAA
CTGTCCTTTTTACTTCAAGATCGGAGCTTGTAGACATGGCGACCGCTGTT
CTCGTCTTCATACTAAGCCCACCATTAGCCCCACTCTTGTTCTCTCCAAC
ATGTATCAAAGACCTGATATGaacctcaacttcatcaaccctacccctaa
tcaacctcaacctcctcaaccacctcaacctgaatctcTTGACCCCGACA
AGCTCCAAGAACACTTCGATGATTTTTATGAAGATCTATTCGAGGAGCTT
AGCAAATATGGGCAAATTCAGAGTTTGAATATTTGTGACAATTTGGCAGA
TCACATGGTTGGCAATGTATATGTTCAGTATAAAGAGGAAGACCATGCTG
CCAATGCCCTAATGAATCTCACTGGAAGATTTTATTCAGGTCGGCCGATC
ATTGTTGACTTCTCTCCTGTTACGGATTTCCGAGAAGCTACTTGTAGGCA
GTATGAGGAAAATGTCTGCAATCGTGGTGGCTATTGTAACTTTATGCACC
TTAAGAAGATTAGCAGAGATTTGAGAAAGCGATTATTTGGAAGAAGTAGG
CGTTGGAATGACCGTAGTGGAAGCAGAAGCCGAAGCCCTCCAAGGAGTCG
TAACTATGAGGGACGTTCATATTCTGGCCGTGGTTCTGGTAGAAGGGATT
TTGACAGGCCTCATGGCAACCATGGTAGGAGGCAAAGAAGCCGTAGTCCT
CGGCATAGAGGAAAACGAAGTAGAAGTCCGGGGGGCAGGGATAGAAGTCC
TCCTATCAGAGACAGAGAAAGTAGTGTAGAAAGGAGAGCAAGAATAGAAC
AATGGAACAGGGAGAAGGAAGTTGAAGATTCTGGTAACAGGGACAATAAG
AATAATAATGATTATGAAGAGCCAAGCTTAAAAAATGGCAGTGAGTCTGG
TAATCATCAGATATAG
back to top

protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_07772.1

>drCicArie.Frontier.2.0.Ca_v2.0_07772.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_07772.1; Name=drCicArie.Frontier.2.0.Ca_v2.0_07772.1; organism=Cicer arietinum; type=polypeptide; length=321bp
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSN
MYQRPDMNLNFINPTPNQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEEL
SKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAANALMNLTGRFYSGRPI
IVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSR
RWNDRSGSRSRSPPRSRNYEGRSYSGRGSGRRDFDRPHGNHGRRQRSRSP
RHRGKRSRSPGGRDRSPPIRDRESSVERRARIEQWNREKEVEDSGNRDNK
NNNDYEEPSLKNGSESGNHQI
back to top

mRNA from alignment at Ca3_v2.0:71581141..71583942+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCicArie.Frontier.2.0.Ca_v2.0_07772.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_07772.1; Name=evm.Ca_v2.0_07772; organism=Cicer arietinum; type=mRNA; length=2802bp; location=Sequence derived from: Ca3_v2.0:71581141..71583942+ (Cicer arietinum
GGGAAAGAAAAACATAAAGGTGGAGCGGTGAAGAGAGCGAAAGGAAACCC
TAAGTAAGCCAGAGATGGCGGAGCATTTGGCATCGATATTCGGAACAGAG
AAAGACAGAGTTAACTGTCCTTTTTACTTCAAGATCGGAGCTTGTAGACA
TGGCGACCGCTGTTCTCGTCTTCATACTAAGCCCACCATTAGCCCCACTC
TTGTTCTCTCCAACATGTATCAAAGACCTGATATGaacctcaacttcatc
aaccctacccctaatcaacctcaacctcctcaaccacctcaacctgaatc
tcTTGACCCCGACAAGCTCCAAGAACACTTCGATGTATGCTTTTTTATAT
TTTAATCCTCCTCTCCCCCTTTTTCATTATTTTTTCACTTTTTCCCTCTC
TGATTTTTCAGGATTTTTATGAAGATCTATTCGAGGAGCTTAGCAAATAT
GGGCAAATTCAGAGTTTGAATATTTGTGACAATTTGGCAGATCACATGGT
TTACCTAATTTCTTTAACTTTTTAtctctctctctctctctctctccctc
tttcattctcGTAACCCTAATTTTGTTGTCTATTTTATTTTATTTTTCAG
GTTGGCAATGTATATGTTCAGTATAAAGAGGAAGACCATGCTGCCAATGC
CCTAATGAATCTCACTGGAAGATTTTATTCAGGTTCTTAATTTTTCCTCC
CTTTTCATCATTTGGTTAGGGTTTTCGGTTACGTTTTATATATATGACTA
CTTGGTGCATTGTTGTTGTAATTCATTGGTTTTAAAATCTGTTGTCGTGT
GAGTTGTTAGTTACATCTATGAACTAATTGATAGATTAAGATTTATAATA
ATAATGATGGAAAACTATTTTTGAATATATATATATATATTTGTGTGGGT
GTGTTTAAATTGTTCGTGTGTGTTAGTTAAGTTAATATTCATATTGGTTT
ATTGTCAATAGATCGGTCATGCCCAATTGGGTTGGCGTTAGTTCCTTTTG
TGTTTACCCTATTGTAGCCACTTTTATTGGTTTTTATTTTACTAATGTTG
GGATTCTTTGTGTTTGGGCTTTATCTGATTAAATGTATTTTAATCATGTA
CCTGGTGCTGCTCTTATTTTCATTTGGTATATCTTTTGTCCGATGTTGCC
TTTACTGGTTTTGCATTTTGTTTGGGGAGTTTTATGATTTTTTTATGTTT
GGGGTGCCCACAGCAATAATTTTGGTTATCTAAATTAATTAATATGCTAC
TGAATTGGGTTTTGTTTTGCACGAGATGAGATTAGGCTATTTTTTTTTAT
AAGCAAGGTGTGGCTATTGTATTATCCATACTTTCAAGTACCCAGAGGTT
GTGATGATTATTAAGGGCACAGCATTGAGATATGTTGGAAAATTGATGTT
TGATGTACTACTTATGAAACTTAAGCATTGTTTACCATTGCTTGATGGGC
CTCTCACTCATCTTTGTTCCTGGTAACTTCTGTTATTGTGATGTAACTTC
TGCCTCGGTAATTCTTCTAGGTCGGCCGATCATTGTTGACTTCTCTCCTG
TTACGGATTTCCGAGAAGCTACTTGTAGGCAGTATGAGGAAAATGTCTGC
AATCGTGGTGGCTATTGTAACTTTATGCACCTTAAGAAGATTAGCAGGTT
GGCTTCTTAACTTAGCTCTTTTCATGATGTTCAATAATTTTACGGTACCA
TTTGTTCTATAACTGTTGCGACCTTAAATCCTTAACTTTAATTTCAGAGA
TTTGAGAAAGCGATTATTTGGAAGAAGTAGGCGTTGGAATGACCGTAGTG
GAAGCAGAAGCCGAAGCCCTCCAAGGAGTCGTAACTATGAGGGACGTTCA
TATTCTGGCCGTGGTTCTGGTAGAAGGGATTTTGACAGGCCTCATGGCAA
CCATGGTAGGAGGCAAAGAAGCCGTAGTCCTCGGCATAGAGGAAAACGAA
GTAGAAGTCCGGGGGGCAGGGATAGAAGTCCTCCTATCAGAGACAGAGAA
AGTAGTGTAGAAAGGAGAGCAAGAATAGAACAATGGAACAGGGAGAAGGA
AGTTGAAGATTCTGGTAACAGGGACAATAAGAATAATAATGATTATGAAG
AGCCAAGCTTAAAAAATGGCAGTGAGTCTGGTAATCATCAGATATAGCAA
CACAGTGATTTGACCCAAAATGAAAAGGCCCTGTAATAATTGCTGCAAGT
AATCTGGTTTGTTTAGATTTCACCTATCGAGTTGGTTTTAGTTGTTTTTG
CTATCATTATATTCTGATTTCTGAACTGTTTTTTTAGATTTAGTATTAAT
TTTGATATAGTTCGGCAGTGGATATTTCATTTCCGTAGTTGGATGGATGT
TCGATGGTAATTATGTTTGGAGATTATCTGGATGAAATAGAGGAAATCAT
GTATGAATTTTGACTATGTGCATTGTTTAGAGATGTTCAGCATGGGAAAC
AGTTTTGGTTTTGATCCAACCCTCCCTACAAAACTCTGGGCTCCCTCTAG
CGTGTAAAATTATCAAGGGAAGAAGAGAATGTGACGTAAATGTAAAGAAA
TCATGAACCCCTTATGTGTAAACGGATTGGAATGGATCACAGTGAGTGTG
TTTTGCTCATATGATAGAATTGGTGGGAGATTTTCGGGGGATTTTGGAAT
TGATAATGTACTGAAAATATATCAAATTCAAAGATAATGTTTAAATTTTA
TCAACACAAATTTGAATGTATTCTTTTAAGTTCTCATAGAGTAAAGAAGC
ATTGACGTTGCTTTCAAAATCAGTTGTTTTGATGATTCATTTGGTAGAGT
AA
back to top

Coding sequence (CDS) from alignment at Ca3_v2.0:71581141..71583942+

>drCicArie.Frontier.2.0.Ca_v2.0_07772.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_07772.1; Name=evm.Ca_v2.0_07772; organism=Cicer arietinum; type=CDS; length=966bp; location=Sequence derived from: Ca3_v2.0:71581141..71583942+ (Cicer arietinum
ATGGCGGAGCATTTGGCATCGATATTCGGAACAGAGAAAGACAGAGTTAA
CTGTCCTTTTTACTTCAAGATCGGAGCTTGTAGACATGGCGACCGCTGTT
CTCGTCTTCATACTAAGCCCACCATTAGCCCCACTCTTGTTCTCTCCAAC
ATGTATCAAAGACCTGATATGaacctcaacttcatcaaccctacccctaa
tcaacctcaacctcctcaaccacctcaacctgaatctcTTGACCCCGACA
AGCTCCAAGAACACTTCGATGATTTTTATGAAGATCTATTCGAGGAGCTT
AGCAAATATGGGCAAATTCAGAGTTTGAATATTTGTGACAATTTGGCAGA
TCACATGGTTGGCAATGTATATGTTCAGTATAAAGAGGAAGACCATGCTG
CCAATGCCCTAATGAATCTCACTGGAAGATTTTATTCAGGTCGGCCGATC
ATTGTTGACTTCTCTCCTGTTACGGATTTCCGAGAAGCTACTTGTAGGCA
GTATGAGGAAAATGTCTGCAATCGTGGTGGCTATTGTAACTTTATGCACC
TTAAGAAGATTAGCAGAGATTTGAGAAAGCGATTATTTGGAAGAAGTAGG
CGTTGGAATGACCGTAGTGGAAGCAGAAGCCGAAGCCCTCCAAGGAGTCG
TAACTATGAGGGACGTTCATATTCTGGCCGTGGTTCTGGTAGAAGGGATT
TTGACAGGCCTCATGGCAACCATGGTAGGAGGCAAAGAAGCCGTAGTCCT
CGGCATAGAGGAAAACGAAGTAGAAGTCCGGGGGGCAGGGATAGAAGTCC
TCCTATCAGAGACAGAGAAAGTAGTGTAGAAAGGAGAGCAAGAATAGAAC
AATGGAACAGGGAGAAGGAAGTTGAAGATTCTGGTAACAGGGACAATAAG
AATAATAATGATTATGAAGAGCCAAGCTTAAAAAATGGCAGTGAGTCTGG
TAATCATCAGATATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR009145U2AF_small
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000571Znf_CCCH
IPR035979RBD_domain_sf
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0046872metal ion binding
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0089701U2AF complex