evm.Ca_v2.0_02885

Transcript Overview


Name	evm.Ca_v2.0_02885
Unique Name	drCicArie.Frontier.2.0.Ca_v2.0_02885.1
Type	mRNA
Organism	Cicer arietinum (chickpea)
Sequence length	393

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Ca1_v2.0	chromosome	Ca1_v2.0:53935129..53938867 -	Cicer arietinum cv. CDC Frontier genome v2.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum cv. CDC Frontier genome v2.0	2024-06-26
Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11	2024-07-26
Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot	2024-07-26
InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0	2024-07-26
Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL	2024-07-26

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
carvumR026	Vigna umbellata FF25 genome v1.0	Vigna umbellata
carvumR041	Vigna umbellata FF25 genome v1.0	Vigna umbellata
carvumR091	Vigna umbellata FF25 genome v1.0	Vigna umbellata
carvvaR025	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
carvvaR068	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
carvasR030	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
carvstR033	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
carvasR080	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
carvasR096	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
carvstR075	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
carvstR102	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
carvunR008	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
carpvfR004	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
carvunR040	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
carpvfR045	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
carpvfR094	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
evm.Ca_v2.0_02885	drCicArie.Frontier.2.0.Ca_v2.0_02885	Cicer arietinum	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drCicArie.Frontier.2.0.cds.Ca_v2.0_02885.1	drCicArie.Frontier.2.0.cds.Ca_v2.0_02885.1	Cicer arietinum	CDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_02885.1	drCicArie.Frontier.2.0.cds.Ca_v2.0_02885.1_2	Cicer arietinum	CDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_02885.1	drCicArie.Frontier.2.0.cds.Ca_v2.0_02885.1_3	Cicer arietinum	CDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_02885.1	drCicArie.Frontier.2.0.cds.Ca_v2.0_02885.1_4	Cicer arietinum	CDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_02885.1	drCicArie.Frontier.2.0.cds.Ca_v2.0_02885.1_5	Cicer arietinum	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drCicArie.Frontier.2.0.Ca_v2.0_02885.1.exon5	drCicArie.Frontier.2.0.Ca_v2.0_02885.1.exon5	Cicer arietinum	exon
drCicArie.Frontier.2.0.Ca_v2.0_02885.1.exon4	drCicArie.Frontier.2.0.Ca_v2.0_02885.1.exon4	Cicer arietinum	exon
drCicArie.Frontier.2.0.Ca_v2.0_02885.1.exon3	drCicArie.Frontier.2.0.Ca_v2.0_02885.1.exon3	Cicer arietinum	exon
drCicArie.Frontier.2.0.Ca_v2.0_02885.1.exon2	drCicArie.Frontier.2.0.Ca_v2.0_02885.1.exon2	Cicer arietinum	exon
drCicArie.Frontier.2.0.Ca_v2.0_02885.1.exon1	drCicArie.Frontier.2.0.Ca_v2.0_02885.1.exon1	Cicer arietinum	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drCicArie.Frontier.2.0.Ca_v2.0_02885.1	drCicArie.Frontier.2.0.Ca_v2.0_02885.1	Cicer arietinum	polypeptide
drCicArie.Frontier.2.0.Ca_v2.0_02885.1	drCicArie.Frontier.2.0.Ca_v2.0_02885.1-protein	Cicer arietinum	polypeptide

Homology

[Close]

BLAST of evm.Ca_v2.0_02885 vs. Araport11
Match: | (Symbols: TRZ4 | tRNAse Z4 | chr3:5509397-5513118 FORWARD LENGTH=942)

HSP 1 Score: 128.642 bits (322), Expect = 2.365e-35
Identity = 61/101 (60.40%), Postives = 75/101 (74.26%), Query Frame = 0

Query:    4 DTEVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIPMI 104
            D  VHPSDV+GPS+PGP+VLLVDCPTESH E LLS  S+ TY   + +N     K V C+IHLSP SV + S Y++WMK F SAQHI+AGHE KN+E P++
Sbjct:  340 DITVHPSDVMGPSVPGPVVLLVDCPTESHAEELLSIPSMKTYYSCL-DNSTDGAKLVNCIIHLSPASVTNSSTYRSWMKRFHSAQHILAGHEAKNMEFPIL 439

[Close]

BLAST of evm.Ca_v2.0_02885 vs. Araport11
Match: | (Symbols: TRZ4 | tRNAse Z4 | chr3:5509886-5513118 FORWARD LENGTH=805)

HSP 1 Score: 128.642 bits (322), Expect = 2.927e-35
Identity = 61/101 (60.40%), Postives = 75/101 (74.26%), Query Frame = 0

Query:    4 DTEVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIPMI 104
            D  VHPSDV+GPS+PGP+VLLVDCPTESH E LLS  S+ TY   + +N     K V C+IHLSP SV + S Y++WMK F SAQHI+AGHE KN+E P++
Sbjct:  203 DITVHPSDVMGPSVPGPVVLLVDCPTESHAEELLSIPSMKTYYSCL-DNSTDGAKLVNCIIHLSPASVTNSSTYRSWMKRFHSAQHILAGHEAKNMEFPIL 302

[Close]

BLAST of evm.Ca_v2.0_02885 vs. Araport11
Match: | (Symbols: TRZ4 | tRNAse Z4 | chr3:5509785-5513118 FORWARD LENGTH=843)

HSP 1 Score: 128.257 bits (321), Expect = 3.145e-35
Identity = 61/101 (60.40%), Postives = 75/101 (74.26%), Query Frame = 0

Query:    4 DTEVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIPMI 104
            D  VHPSDV+GPS+PGP+VLLVDCPTESH E LLS  S+ TY   + +N     K V C+IHLSP SV + S Y++WMK F SAQHI+AGHE KN+E P++
Sbjct:  241 DITVHPSDVMGPSVPGPVVLLVDCPTESHAEELLSIPSMKTYYSCL-DNSTDGAKLVNCIIHLSPASVTNSSTYRSWMKRFHSAQHILAGHEAKNMEFPIL 340

[Close]

BLAST of evm.Ca_v2.0_02885 vs. Araport11
Match: | (Symbols: TRZ3 | tRNAse Z3 | chr1:19420911-19424419 REVERSE LENGTH=890)

HSP 1 Score: 112.079 bits (279), Expect = 1.439e-29
Identity = 65/119 (54.62%), Postives = 77/119 (64.71%), Query Frame = 0

Query:    4 DTEVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIPMILNHSPSLATASSSLAAVF 122
            D  VHPSDV+GPS+PGPIVLLVDCPTESH   L S KSL +Y    +E    A K V C+IHLSP SV S   YQ+WMK F   QHI+AGH++KN+  P IL  S  +A   + L   F
Sbjct:  301 DITVHPSDVMGPSLPGPIVLLVDCPTESHAAELFSLKSLESYYSSPDEQTIGA-KFVNCIIHLSPSSVTSSPTYQSWMKKFHLTQHILAGHQRKNMAFP-ILKASSRIAARLNYLCPQF 417

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy Swiss-Prot (2024)
Match: sp|F4J1H7|RNZ4_ARATH (tRNAse Z TRZ4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=TRZ4 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.340e-34
Identity = 61/101 (60.40%), Postives = 75/101 (74.26%), Query Frame = 0

Query:    4 DTEVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIPMI 104
            D  VHPSDV+GPS+PGP+VLLVDCPTESH E LLS  S+ TY   + +N     K V C+IHLSP SV + S Y++WMK F SAQHI+AGHE KN+E P++
Sbjct:  340 DITVHPSDVMGPSVPGPVVLLVDCPTESHAEELLSIPSMKTYYSCL-DNSTDGAKLVNCIIHLSPASVTNSSTYRSWMKRFHSAQHILAGHEAKNMEFPIL 439

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8VYS2|RNZ3_ARATH (tRNase Z TRZ3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=TRZ3 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.423e-28
Identity = 65/119 (54.62%), Postives = 77/119 (64.71%), Query Frame = 0

Query:    4 DTEVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIPMILNHSPSLATASSSLAAVF 122
            D  VHPSDV+GPS+PGPIVLLVDCPTESH   L S KSL +Y    +E    A K V C+IHLSP SV S   YQ+WMK F   QHI+AGH++KN+  P IL  S  +A   + L   F
Sbjct:  301 DITVHPSDVMGPSLPGPIVLLVDCPTESHAAELFSLKSLESYYSSPDEQTIGA-KFVNCIIHLSPSSVTSSPTYQSWMKKFHLTQHILAGHQRKNMAFP-ILKASSRIAARLNYLCPQF 417

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9GL72|RNZ2_PANTR (Zinc phosphodiesterase ELAC protein 2 OS=Pan troglodytes OX=9598 GN=ELAC2 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 9.988e-10
Identity = 30/91 (32.97%), Postives = 49/91 (53.85%), Query Frame = 0

Query:    2 HTDTEVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFG-SAQHIM 91
            H   E+   ++  P  PG   ++V+CP ES ++ +  + +   Y         KA   VA V+H++PESV+  S+YQ WM+ FG   QH++
Sbjct:  286 HEGREILAEELCTPPDPGAAFVVVECPDESFIQPICENATFQRYQG-------KADAPVALVVHMAPESVLVDSRYQQWMERFGPDTQHLV 369

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9GL73|RNZ2_GORGO (Zinc phosphodiesterase ELAC protein 2 OS=Gorilla gorilla gorilla OX=9595 GN=ELAC2 PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.048e-9
Identity = 30/91 (32.97%), Postives = 49/91 (53.85%), Query Frame = 0

Query:    2 HTDTEVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFG-SAQHIM 91
            H   E+   ++  P  PG   ++V+CP ES ++ +  + +   Y         KA   VA V+H++PESV+  S+YQ WM+ FG   QH++
Sbjct:  286 HEGREILAEELCTPPDPGAAFVVVECPDESFIQPICENATFQRYQG-------KADAPVALVVHMAPESVLVDSRYQQWMERFGPDTQHLV 369

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8HY87|RNZ2_MACFA (Zinc phosphodiesterase ELAC protein 2 OS=Macaca fascicularis OX=9541 GN=ELAC2 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.684e-9
Identity = 29/91 (31.87%), Postives = 49/91 (53.85%), Query Frame = 0

Query:    2 HTDTEVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFG-SAQHIM 91
            H   E+   ++  P  PG   ++V+CP E  ++ +  + +   Y         KA   VA V+H++PESV++ S+YQ WM+ FG   QH++
Sbjct:  286 HEGREILAEELCTPPDPGAAFVVVECPDEGFIQPICENATFQRYQG-------KADAPVALVVHMAPESVLADSRYQQWMERFGPDTQHLV 369

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8CGS5|RNZ2_RAT (Zinc phosphodiesterase ELAC protein 2 OS=Rattus norvegicus OX=10116 GN=Elac2 PE=1 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 3.616e-9
Identity = 29/87 (33.33%), Postives = 50/87 (57.47%), Query Frame = 0

Query:    6 EVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFG-SAQHIM 91
            E+   ++  P  PG + ++V+CP E  ++ +  + +   Y  Q E + P     VA V+H++PESV+  S+YQ WM+ FG   QH++
Sbjct:  289 EIAAEELCTPPDPGLVFIVVECPDEGFIQPICENDTFQRY--QGEADAP-----VAVVVHIAPESVLIDSRYQQWMERFGPDTQHLI 368

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9BQ52|RNZ2_HUMAN (Zinc phosphodiesterase ELAC protein 2 OS=Homo sapiens OX=9606 GN=ELAC2 PE=1 SV=2)

HSP 1 Score: 55.8398 bits (133), Expect = 7.760e-9
Identity = 29/91 (31.87%), Postives = 48/91 (52.75%), Query Frame = 0

Query:    2 HTDTEVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFG-SAQHIM 91
            H   E+   ++  P  PG   ++V+CP ES ++ +  + +   Y         KA   VA V+H++P SV+  S+YQ WM+ FG   QH++
Sbjct:  286 HEGREILAEELCTPPDPGAAFVVVECPDESFIQPICENATFQRYQG-------KADAPVALVVHMAPASVLVDSRYQQWMERFGPDTQHLV 369

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q80Y81|RNZ2_MOUSE (Zinc phosphodiesterase ELAC protein 2 OS=Mus musculus OX=10090 GN=Elac2 PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 8.149e-9
Identity = 29/87 (33.33%), Postives = 49/87 (56.32%), Query Frame = 0

Query:    6 EVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFG-SAQHIM 91
            E+   ++  P  PG + ++V+CP E  +  +  + +   Y  Q E + P     VA V+H++PESV+  S+YQ WM+ FG   QH++
Sbjct:  286 EIAAEELCTPPDPGLVFIVVECPDEGFILPICENDTFKRY--QAEADAP-----VALVVHIAPESVLIDSRYQQWMERFGPDTQHLI 365

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XBH5|A0A1S2XBH5_CICAR (ribonuclease Z OS=Cicer arietinum OX=3827 GN=LOC101489661 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.005e-57
Identity = 101/121 (83.47%), Postives = 104/121 (85.95%), Query Frame = 0

Query:    2 HTDTEVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIPMILNHSPSLATASSSLAAVF 122
            H +  VHPSDVLGPSIPGPIVLLVDCPTE HLEALLSSKSLATYGDQVE NLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIP IL  S  +A   + L   F
Sbjct:  329 HQNVMVHPSDVLGPSIPGPIVLLVDCPTEFHLEALLSSKSLATYGDQVEGNLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIP-ILKASARIAARLNYLCPRF 448

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XBF6|A0A1S2XBF6_CICAR (ribonuclease Z OS=Cicer arietinum OX=3827 GN=LOC101489661 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 2.114e-57
Identity = 101/121 (83.47%), Postives = 104/121 (85.95%), Query Frame = 0

Query:    2 HTDTEVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIPMILNHSPSLATASSSLAAVF 122
            H +  VHPSDVLGPSIPGPIVLLVDCPTE HLEALLSSKSLATYGDQVE NLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIP IL  S  +A   + L   F
Sbjct:  280 HQNVMVHPSDVLGPSIPGPIVLLVDCPTEFHLEALLSSKSLATYGDQVEGNLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIP-ILKASARIAARLNYLCPRF 399

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3P575|A0A2K3P575_TRIPR (ribonuclease Z (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g007006 PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.037e-48
Identity = 87/116 (75.00%), Postives = 96/116 (82.76%), Query Frame = 0

Query:    7 VHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIPMILNHSPSLATASSSLAAVF 122
            VHPSDV+ PSIPGPIVL+VDCPTESHLEA+LS+KSLATYGDQV  NLPKA + V+CVIHL+PESVVSCS YQ WMK FGSAQHIMAGHEKKNVE+P IL  S   AT  + L   F
Sbjct:  194 VHPSDVMDPSIPGPIVLVVDCPTESHLEAMLSAKSLATYGDQVG-NLPKADRSVSCVIHLTPESVVSCSNYQNWMKTFGSAQHIMAGHEKKNVEVP-ILKASARTATRLNYLCPRF 307

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2NP03|A0A0B2NP03_GLYSO (ribonuclease Z OS=Glycine soja OX=3848 GN=glysoja_030787 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.657e-48
Identity = 88/121 (72.73%), Postives = 97/121 (80.17%), Query Frame = 0

Query:    2 HTDTEVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIPMILNHSPSLATASSSLAAVF 122
            H +  VHPSDVLGPS+PGPIVLLVDCPTESHLEALLS +SLA+Y DQ + NLP+AGK V CVIHL+P SVVSCS YQ WMK FGSAQHIMAGHEKKNVEIP IL  S  +AT  + L   F
Sbjct:  278 HQNIMVHPSDVLGPSVPGPIVLLVDCPTESHLEALLSMQSLASYCDQTD-NLPEAGKSVTCVIHLTPASVVSCSNYQKWMKKFGSAQHIMAGHEKKNVEIP-ILKASARIATRLNYLCPQF 396

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445GMN1|A0A445GMN1_GLYSO (ribonuclease Z OS=Glycine soja OX=3848 GN=D0Y65_039697 PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 6.070e-48
Identity = 88/121 (72.73%), Postives = 97/121 (80.17%), Query Frame = 0

Query:    2 HTDTEVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIPMILNHSPSLATASSSLAAVF 122
            H +  VHPSDVLGPS+PGPIVLLVDCPTESHLEALLS +SLA+Y DQ + NLP+AGK V CVIHL+P SVVSCS YQ WMK FGSAQHIMAGHEKKNVEIP IL  S  +AT  + L   F
Sbjct:  333 HQNIMVHPSDVLGPSVPGPIVLLVDCPTESHLEALLSMQSLASYCDQTD-NLPEAGKSVTCVIHLTPASVVSCSNYQKWMKKFGSAQHIMAGHEKKNVEIP-ILKASARIATRLNYLCPQF 451

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0R0G4T6|A0A0R0G4T6_SOYBN (ribonuclease Z OS=Glycine max OX=3847 GN=GLYMA_15G017900 PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 6.087e-48
Identity = 88/121 (72.73%), Postives = 97/121 (80.17%), Query Frame = 0

Query:    2 HTDTEVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIPMILNHSPSLATASSSLAAVF 122
            H +  VHPSDVLGPS+PGPIVLLVDCPTESHLEALLS +SLA+Y DQ + NLP+AGK V CVIHL+P SVVSCS YQ WMK FGSAQHIMAGHEKKNVEIP IL  S  +AT  + L   F
Sbjct:  329 HQNIMVHPSDVLGPSVPGPIVLLVDCPTESHLEALLSMQSLASYCDQTD-NLPEAGKSVTCVIHLTPASVVSCSNYQKWMKKFGSAQHIMAGHEKKNVEIP-ILKASARIATRLNYLCPQF 447

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6LFV0|A0A2Z6LFV0_TRISU (ribonuclease Z OS=Trifolium subterraneum OX=3900 GN=TSUD_112590 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.738e-47
Identity = 86/116 (74.14%), Postives = 96/116 (82.76%), Query Frame = 0

Query:    7 VHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIPMILNHSPSLATASSSLAAVF 122
            +HPSDV+ PSIPGPIVL+VDCPTESHLEA+LS+KSLATYGDQV  NLPKAGK V+CVIHL+PESVV  S YQ WMK FGSAQHIMAGHEKKNVE+P IL  S  +AT  + L   F
Sbjct:  273 IHPSDVMDPSIPGPIVLVVDCPTESHLEAILSAKSLATYGDQVG-NLPKAGKSVSCVIHLTPESVVRRSNYQNWMKTFGSAQHIMAGHEKKNVEVP-ILKASARIATRLNYLCPRF 386

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BLAST of evm.Ca_v2.0_02885 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6M0R1|A0A2Z6M0R1_TRISU (ribonuclease Z OS=Trifolium subterraneum OX=3900 GN=TSUD_112580 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 2.207e-47
Identity = 86/116 (74.14%), Postives = 96/116 (82.76%), Query Frame = 0

Query:    7 VHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIPMILNHSPSLATASSSLAAVF 122
            +HPSDV+ PSIPGPIVL+VDCPTESHLEA+LS+KSLATYGDQV  NLPKAGK V+CVIHL+PESVV  S YQ WMK FGSAQHIMAGHEKKNVE+P IL  S  +AT  + L   F
Sbjct:  321 IHPSDVMDPSIPGPIVLVVDCPTESHLEAILSAKSLATYGDQVG-NLPKAGKSVSCVIHLTPESVVRRSNYQNWMKTFGSAQHIMAGHEKKNVEVP-ILKASARIATRLNYLCPRF 434

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy TrEMBL (2024)
Match: tr|G7IUN1|G7IUN1_MEDTR (ribonuclease Z OS=Medicago truncatula OX=3880 GN=11427220 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 4.304e-47
Identity = 85/116 (73.28%), Postives = 95/116 (81.90%), Query Frame = 0

Query:    7 VHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIPMILNHSPSLATASSSLAAVF 122
            VHPSDV+ PSIPGP+VL+VDCPTESHLEALLS+KSL TYGDQV  NLPKAGK V+CVIHL+PESVV CS YQ WMK F SAQHIMAGHEKKN+E+P IL  S  +AT  + L   F
Sbjct:  328 VHPSDVMDPSIPGPVVLVVDCPTESHLEALLSAKSLDTYGDQVG-NLPKAGKSVSCVIHLTPESVVCCSNYQNWMKTFSSAQHIMAGHEKKNIEVP-ILKASARIATRLNYLCPRF 441

[Close]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445IFD7|A0A445IFD7_GLYSO (ribonuclease Z OS=Glycine soja OX=3848 GN=D0Y65_032753 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.016e-46
Identity = 86/116 (74.14%), Postives = 94/116 (81.03%), Query Frame = 0

Query:    7 VHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVEENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVEIPMILNHSPSLATASSSLAAVF 122
            VHPSDVLGPS+PGPIVLLVDCPTESHLEALLS +SLA+Y DQ + N P+AGK V CVIHL+P SVVSCS YQ WMK FGSAQHIMAGHEKKNVEIP IL  S  +AT  + L   F
Sbjct:  330 VHPSDVLGPSVPGPIVLLVDCPTESHLEALLSVQSLASYCDQTD-NQPEAGKSVTCVIHLTPSSVVSCSNYQKWMKKFGSAQHIMAGHEKKNVEIP-ILKASARIATRLNYLCPQF 443

The following BLAST results are available for this feature:

BLAST of evm.Ca_v2.0_02885 vs. Araport11
BLAST of evm.Ca_v2.0_02885 vs. ExPASy Swiss-Prot (2024)
BLAST of evm.Ca_v2.0_02885 vs. ExPASy TrEMBL (2024)

BLAST of evm.Ca_v2.0_02885 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11)
Total hits: 4

Position :

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Match Name	E-value	Identity	Description
\|	2.365e-35	60.40	Symbols: TRZ4 \| tRNAse Z4 \| chr3:5509397-5513118 F...	[more]
\|	2.927e-35	60.40	Symbols: TRZ4 \| tRNAse Z4 \| chr3:5509886-5513118 F...	[more]
\|	3.145e-35	60.40	Symbols: TRZ4 \| tRNAse Z4 \| chr3:5509785-5513118 F...	[more]
\|	1.439e-29	54.62	Symbols: TRZ3 \| tRNAse Z3 \| chr1:19420911-19424419...	[more]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot )
Total hits: 8

Position :

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Match Name	E-value	Identity	Description
sp\|F4J1H7\|RNZ4_ARATH	2.340e-34	60.40	tRNAse Z TRZ4, mitochondrial OS=Arabidopsis thalia...	[more]
sp\|Q8VYS2\|RNZ3_ARATH	1.423e-28	54.62	tRNase Z TRZ3, mitochondrial OS=Arabidopsis thalia...	[more]
sp\|Q9GL72\|RNZ2_PANTR	9.988e-10	32.97	Zinc phosphodiesterase ELAC protein 2 OS=Pan trogl...	[more]
sp\|Q9GL73\|RNZ2_GORGO	1.048e-9	32.97	Zinc phosphodiesterase ELAC protein 2 OS=Gorilla g...	[more]
sp\|Q8HY87\|RNZ2_MACFA	1.684e-9	31.87	Zinc phosphodiesterase ELAC protein 2 OS=Macaca fa...	[more]
sp\|Q8CGS5\|RNZ2_RAT	3.616e-9	33.33	Zinc phosphodiesterase ELAC protein 2 OS=Rattus no...	[more]
sp\|Q9BQ52\|RNZ2_HUMAN	7.760e-9	31.87	Zinc phosphodiesterase ELAC protein 2 OS=Homo sapi...	[more]
sp\|Q80Y81\|RNZ2_MOUSE	8.149e-9	33.33	Zinc phosphodiesterase ELAC protein 2 OS=Mus muscu...	[more]

BLAST of evm.Ca_v2.0_02885 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
tr\|A0A1S2XBH5\|A0A1S2XBH5_CICAR	2.005e-57	83.47	ribonuclease Z OS=Cicer arietinum OX=3827 GN=LOC10...	[more]
tr\|A0A1S2XBF6\|A0A1S2XBF6_CICAR	2.114e-57	83.47	ribonuclease Z OS=Cicer arietinum OX=3827 GN=LOC10...	[more]
tr\|A0A2K3P575\|A0A2K3P575_TRIPR	3.037e-48	75.00	ribonuclease Z (Fragment) OS=Trifolium pratense OX...	[more]
tr\|A0A0B2NP03\|A0A0B2NP03_GLYSO	4.657e-48	72.73	ribonuclease Z OS=Glycine soja OX=3848 GN=glysoja_...	[more]
tr\|A0A445GMN1\|A0A445GMN1_GLYSO	6.070e-48	72.73	ribonuclease Z OS=Glycine soja OX=3848 GN=D0Y65_03...	[more]
tr\|A0A0R0G4T6\|A0A0R0G4T6_SOYBN	6.087e-48	72.73	ribonuclease Z OS=Glycine max OX=3847 GN=GLYMA_15G...	[more]
tr\|A0A2Z6LFV0\|A0A2Z6LFV0_TRISU	1.738e-47	74.14	ribonuclease Z OS=Trifolium subterraneum OX=3900 G...	[more]
tr\|A0A2Z6M0R1\|A0A2Z6M0R1_TRISU	2.207e-47	74.14	ribonuclease Z OS=Trifolium subterraneum OX=3900 G...	[more]
tr\|G7IUN1\|G7IUN1_MEDTR	4.304e-47	73.28	ribonuclease Z OS=Medicago truncatula OX=3880 GN=1...	[more]
tr\|A0A445IFD7\|A0A445IFD7_GLYSO	2.016e-46	74.14	ribonuclease Z OS=Glycine soja OX=3848 GN=D0Y65_03...	[more]

InterPro

Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR047151	Zinc phosphodiesterase ELAC protein 2-like	PANTHER	PTHR12553	ZINC PHOSPHODIESTERASE ELAC PROTEIN 2	coord: 3..106

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Ca1_v2.0:53935129..53938867-
coding sequence from alignment at Ca1_v2.0:53935129..53938867-

mRNA sequence

>drCicArie.Frontier.2.0.Ca_v2.0_02885.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02885.1; Name=evm.Ca_v2.0_02885; organism=Cicer arietinum; type=mRNA; length=393bp
ATGCACACCGACACTGAGGTTCATCCAAGTGATGTCTTGGGTCCTTCTAT
TCCTGGTCCTATTGTACTCCTTGTGGATTGCCCAACAGAATCTCACTTGG
AAGCATTATTGTCTTCAAAATCACTAGCTACTTATGGTGATCAAGTGGAG
GAAAACCTGCCAAAGGCTGGTAAGGGTGTTGCGTGTGTAATTCACTTGTC
TCCTGAATCTGTTGTAAGTTGTTCAAAATACCAAACATGGATGAAGGCAT
TTGGTTCTGCACAGCATATCATGGCCGGACATGAAAAGAAGAATGTAGAG
ATTCCTATGATTTTGAATCATTCACCGTCCCTCGCCACCGCATCGTCGTC
CCTCGCCGCCGTGTTCAAAAACCGCGGTAAATTTAAATTTTGA

protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_02885.1

>drCicArie.Frontier.2.0.Ca_v2.0_02885.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02885.1; Name=drCicArie.Frontier.2.0.Ca_v2.0_02885.1; organism=Cicer arietinum; type=polypeptide; length=130bp
MHTDTEVHPSDVLGPSIPGPIVLLVDCPTESHLEALLSSKSLATYGDQVE
ENLPKAGKGVACVIHLSPESVVSCSKYQTWMKAFGSAQHIMAGHEKKNVE
IPMILNHSPSLATASSSLAAVFKNRGKFKF

mRNA from alignment at Ca1_v2.0:53935129..53938867-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>drCicArie.Frontier.2.0.Ca_v2.0_02885.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02885.1; Name=evm.Ca_v2.0_02885; organism=Cicer arietinum; type=mRNA; length=3739bp; location=Sequence derived from: Ca1_v2.0:53935129..53938867- (Cicer arietinum
ATGCACACCGACACTGAGGTATGAGCCATTGAAAAGATATACAATAATAA
AATATGAGCAGTGTATCAGAAAAACACAACAAAAGAAGAAGCAAAAATTA
TCATACCTTCTGTGATTTAAACTAACATTGATTTTGAATCATTCATATTG
TAACTGTTTTCCTACCACAATAGGTTCATCCAAGTGATGTCTTGGGTCCT
TCTATTCCTGGTCCTATTGTACTCCTTGTGGATTGCCCAACAGAATCTCA
CTTGGAAGCATTATTGTCTTCAAAATCACTAGCTACTTATGGTGATCAAG
TGGAGGAAAACCTGCCAAAGGCTGGTAAGGGTGTTGCGTGTGTAATTCAC
TTGTCTCCTGAATCTGTTGTAAGTTGTTCAAAATACCAAACATGGATGAA
GGCATTTGGTTCTGCACAGCATATCATGGCCGGACATGAAAAGTAAGGTG
TTAGTCTTTCTGGATGGTCCTATTTTCTAGTTCTTGTTTTATCACTGTTA
ATTTCTTTCTGGTTGCTCATGCTGTTTGCAGGAAGAATGTAGAGATTCCT
ATGGTTTGATCTAAAGATTAAGAAGGAATGAATATGAGTTGAGTTCATAT
GGTTTGATCTAAAGATTAAGAAGTTGAAAAAGTTAAATGATTGGAGTTCA
AATTTTGATGAAAGATAAAATACTAACATAACAACTGCTATTATATTAAC
TTTTTCCTGTCGAAAAAAGAATGAGTATTGATTAACTAATCTGATTTCAT
TGAAAAATTTAAGTGATGTTAGGTGTTGAAGCTCTTGAAAGGCTGATGGT
TGAGTGTGATATTTCAAATTTTGAAGAGTTATGATTTGATTCTCAAGAGA
GCGCTCTTAACAATTGAACAAAATCATCATAGGGTTTGTTTACATCAAAA
GATTAAACAAAATAGGATGAGTTCTCTATGATATGCTTGGCATTCAAGGA
GTCGTAGCTTCGCCCATTAGCATATCTAAAGATATGAATCTTTGAAATAA
AAAACATGCAATTATTGCAGTTAATAAATCAAAATTGTAGAATAAAAATC
CCAGTATTCTCATTCTAAATTGATATTTTCAATCTTATTTGCATTTGTCA
AAAAAAATCCCATTTGCTAAAATAAATTAGACTATCAATAATATCCAATT
TTAATTTAATGGCTTTTATTTATCATCAGCAATTTCTTTGGTTTTCACAA
TATAAAAGAGTAATAAAGTCAAAAAAGAAGAAGAAAAATAGGTTAATGTT
CTTTTCTTAAGACTGTCGTCATTTTTTTTAGATTTTAAGACCCGGTAGTG
GAAATAAAATTTATAATGTTATCAGAAGTTTCAATTCCATAATATGTATA
TATTTTGCATAAACTAGATAGATGAACAACCACATAAAAACATCCCATCT
TTTACAAGATATATGTATGCATGGGTCGTTAGTAAAATAATTGAATAATA
TTCGTGGAAGATTTGGATCCATTGAAATATGAGAGAATAAAAATATATTC
AATCTTACTTATGTATGCATGGATCGTTAGTAAAATAACTGAATAATATT
CACATTACATTCAATATTAATACTTAATCAATGGTGGACAATTTGAATCC
ATTCAAATATGAGAGAGTGATATTCTCGTTTTACTATTAAAATATATTTA
ATCTTACTTATTAAGTTAAAAAATTTAATATATATTAAGTTGATTTAAAT
ATGAGAGAATTTAAAATATGTGGTACACATGATATATTTAAAATTGACTT
CAAATAGTAAGTTTGTGATATTTTGCCAATTACATGATAACCCTTTAATT
ATGTGATGGTGTGTGTTCCAATAACTTGGTTATTCATGAAGATGACAAAA
AAAAAAAATAATGAATAAAAATCATATTTTGTTTTTTTATAATTGTATTA
AACAAAAAATAAGGCGTATGTCTCACGTCATTCACGATTTCATAGATGAA
AGATTGACTTGATACTTTTTTGACATAATACAACGAAAAATACAAGACAA
AAATAATGAACAATAAACATAGTTTGCCGATCAAAAAAATTTATACAAGA
GAAATAATTTAACCAAAAAAAATTACATTTTCAAAAATTCTAAAAGATAA
TATTTGAGTTTTATTATTATTATTAACAATTCAATAGAAAGTAGAAAAAC
ATTTTATTTTACATTTTCTACTATCTTAACCATAAATAGACCATTAAAAT
TGACATCATAGTAAATTCGTGATGTAATGAGAATTGCATTATCACTTTAT
GATAGTGTGATATTGTATCGTCTATAACTTATTTTTTGAATAAATAAATA
TTAATCATTAGTAGTTTGTTAGAAGAAATTAAATTTATTAACACATAAAT
TAAACTCTAAACCTCCTTCTTAATATTCATTAGCGTCTCCCATCTATATC
AGTGAACTAGACTTTGGAAACATGTGTTTCCATTGGTAATTGATGTGTGC
ATTTCCATGAAATGAACCAGATGTTTCAAAGGGATTTTTGGAATCTAAGC
AATCACTACTCATGCAAGCTCCAAATAACCATGCCTCAATTTGTATTTTA
TAATGTGCGAATATGATAAATTTTTTGGGGTATATCTGTAAAGGAAAACA
AACTATAAGAACTATTTGACTGTCTTTTTCCTTTTTATCTAAACAAATGA
AAGGTCTTACAAATTAAGAAACGTGAAAATTTTACAAATAACAATGTAAT
AAATAAATTAACGGTAGGTAAAAGCACATAGTTCACATTAGACCGTACTT
AATAGAATGCTTAATCAAATAATCATTGATACTAAAAAATTAATACTTAT
TAGGGTTCAATTTTAATAAACTCTCTCCATATATAATTCACACGTTTTTC
ATACTAAAATAAATGAATTTTATTAAAATATAATGATATATAATTATTAG
ATTATTGTTGAAATTTGTTTAATAATTTTTTAAATTAATGAGTTAAGATA
TTAAACGACTATTAGTACTAAATTAAAAATTAATTAAATAAAAAAGCTAT
GTATGCTCCTAAGAGCGAATTAATACTCAAATGAGAAATTTCCATTATAG
ATGCTCTTATACAGTATCTAAACATGAGTTTATGCCACAAAAAATTGAAA
ACAATTTTAGCTACTAAAAAGTAACAAACAATAAAAGTTACGGTGAAATC
TCAATGTCGAGTAAAAATCTCAAGATTTTGACTTAAGCTCCTGAATCAAA
CACGCAACAAGCGCTCTCTCTATATATGAAAAACACAACTAAAAAGAAAA
TAAAAATTATCATAGCTTCTGAGTTTTAAATCAACATAGATTTTGAATCA
TTCACCGTCCCTCGCCACCGCATCGTCGTCCCTCGCCGCCGTGTTCAAAA
ACCGCGGGTATATATAACTTTTCCTTCTATATCTTCCTTTTCTGTTTTGT
GTGTTTATACGATTTTAAAAACTGTTAGTATTGATTGATTTCAACCATAA
TTTTTCCTGAATTACGGTTTCTAACTACATAATCATCCACGTTCCTTCTC
ATGCTTTATCCATGGTGACTAAAACTCTATCTTACTATTACAATCCAAAG
TTAGAAATCAAGTTGTTACGAAAACTCAGTAATTTCCATTCGTTACTTCT
TTATAATGTTATATTTTCATATATTCATCATTTATACATTCCTTTCAGAG
CTTGATATTGACAATATTAGACTCATCAAAAAAGATATTGACAAGATTAT
TCCATTTTTTTTTTTGTCTTCAGTAAATTTAAATTTTGA

Coding sequence (CDS) from alignment at Ca1_v2.0:53935129..53938867-

>drCicArie.Frontier.2.0.Ca_v2.0_02885.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_02885.1; Name=evm.Ca_v2.0_02885; organism=Cicer arietinum; type=CDS; length=393bp; location=Sequence derived from: Ca1_v2.0:53935129..53938867- (Cicer arietinum
ATGCACACCGACACTGAGGTTCATCCAAGTGATGTCTTGGGTCCTTCTAT
TCCTGGTCCTATTGTACTCCTTGTGGATTGCCCAACAGAATCTCACTTGG
AAGCATTATTGTCTTCAAAATCACTAGCTACTTATGGTGATCAAGTGGAG
GAAAACCTGCCAAAGGCTGGTAAGGGTGTTGCGTGTGTAATTCACTTGTC
TCCTGAATCTGTTGTAAGTTGTTCAAAATACCAAACATGGATGAAGGCAT
TTGGTTCTGCACAGCATATCATGGCCGGACATGAAAAGAAGAATGTAGAG
ATTCCTATGATTTTGAATCATTCACCGTCCCTCGCCACCGCATCGTCGTC
CCTCGCCGCCGTGTTCAAAAACCGCGGTAAATTTAAATTTTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR047151	RNZ2-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0042781	3'-tRNA processing endoribonuclease activity

Search form

evm.Ca_v2.0_02885